ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.513 132.036 22.603 1.00 54.35 O
ATOM 2 P G A 314 5.140 130.659 22.047 1.00 53.29 P
ATOM 3 OP1 G A 314 4.916 130.596 20.581 1.00 56.75 O
ATOM 4 OP2 G A 314 4.658 129.550 22.903 1.00 55.29 O
ATOM 5 O5' G A 314 6.708 130.809 22.292 1.00 52.78 O
ATOM 6 C5' G A 314 7.475 131.814 21.607 1.00 49.81 C
ATOM 7 C4' G A 314 8.925 131.740 22.022 1.00 49.60 C
ATOM 8 O4' G A 314 9.024 131.962 23.454 1.00 50.25 O
ATOM 9 C3' G A 314 9.621 130.406 21.798 1.00 48.99 C
ATOM 10 O3' G A 314 10.103 130.302 20.461 1.00 50.16 O
ATOM 11 C2' G A 314 10.759 130.471 22.809 1.00 48.08 C
ATOM 12 O2' G A 314 11.821 131.291 22.382 1.00 45.61 O
ATOM 13 C1' G A 314 10.079 131.176 23.983 1.00 49.46 C
ATOM 14 N9 G A 314 9.529 130.260 24.983 1.00 50.64 N
ATOM 15 C8 G A 314 8.204 129.979 25.220 1.00 50.80 C
ATOM 16 N7 G A 314 8.026 129.141 26.204 1.00 51.06 N
ATOM 17 C5 G A 314 9.312 128.842 26.637 1.00 51.70 C
ATOM 18 C6 G A 314 9.757 127.990 27.685 1.00 51.88 C
ATOM 19 O6 G A 314 9.079 127.292 28.454 1.00 51.48 O
ATOM 20 N1 G A 314 11.146 127.992 27.791 1.00 50.35 N
ATOM 21 C2 G A 314 11.998 128.705 26.987 1.00 50.84 C
ATOM 22 N2 G A 314 13.312 128.569 27.240 1.00 49.42 N
ATOM 23 N3 G A 314 11.596 129.494 26.004 1.00 50.86 N
ATOM 24 C4 G A 314 10.250 129.518 25.890 1.00 50.75 C
ATOM 25 P A A 315 10.430 128.858 19.829 1.00 53.03 P
ATOM 26 OP1 A A 315 11.083 129.089 18.516 1.00 51.44 O
ATOM 27 OP2 A A 315 9.211 128.012 19.905 1.00 52.51 O
ATOM 28 O5' A A 315 11.509 128.215 20.811 1.00 53.96 O
TER

ATOM 1 O3' U B 316 18.582 124.112 21.913 1.00 52.08 O
ATOM 2 P A B 317 18.097 123.978 23.445 1.00 51.32 P
ATOM 3 OP1 A B 317 18.975 122.945 24.051 1.00 53.11 O
ATOM 4 OP2 A B 317 16.625 123.791 23.469 1.00 49.80 O
ATOM 5 O5' A B 317 18.407 125.404 24.104 1.00 51.32 O
ATOM 6 C5' A B 317 19.598 125.626 24.900 1.00 48.21 C
ATOM 7 C4' A B 317 19.586 127.019 25.506 1.00 46.57 C
ATOM 8 O4' A B 317 19.494 127.999 24.435 1.00 47.05 O
ATOM 9 C3' A B 317 18.436 127.341 26.459 1.00 45.77 C
ATOM 10 O3' A B 317 18.830 128.389 27.360 1.00 45.55 O
ATOM 11 C2' A B 317 17.419 127.963 25.514 1.00 47.02 C
ATOM 12 O2' A B 317 16.476 128.776 26.186 1.00 44.84 O
ATOM 13 C1' A B 317 18.347 128.798 24.628 1.00 48.03 C
ATOM 14 N9 A B 317 17.832 129.190 23.317 1.00 50.76 N
ATOM 15 C8 A B 317 17.113 128.444 22.416 1.00 50.48 C
ATOM 16 N7 A B 317 16.803 129.093 21.323 1.00 51.28 N
ATOM 17 C5 A B 317 17.355 130.350 21.511 1.00 52.43 C
ATOM 18 C6 A B 317 17.378 131.507 20.705 1.00 52.75 C
ATOM 19 N6 A B 317 16.816 131.578 19.496 1.00 50.53 N
ATOM 20 N1 A B 317 18.010 132.600 21.191 1.00 52.37 N
ATOM 21 C2 A B 317 18.581 132.525 22.400 1.00 52.76 C
ATOM 22 N3 A B 317 18.633 131.496 23.247 1.00 53.83 N
ATOM 23 C4 A B 317 17.993 130.426 22.736 1.00 52.64 C
ATOM 24 P C B 318 19.660 128.056 28.699 1.00 43.41 P
ATOM 25 OP1 C B 318 19.582 129.297 29.510 1.00 41.86 O
ATOM 26 OP2 C B 318 20.987 127.491 28.347 1.00 37.60 O
ATOM 27 O5' C B 318 18.811 126.914 29.425 1.00 43.69 O
TER

Atoms:
OP1: (4.916,130.596,20.581)
OP2: (4.658,129.550,22.903)
C3': (9.621,130.406,21.798)
C1': (10.079,131.176,23.983)
C5': (7.475,131.814,21.607)
O6: (9.079,127.292,28.454)
O4': (9.024,131.962,23.454)
C8: (8.204,129.979,25.220)
C2: (11.998,128.705,26.987)
C6: (9.757,127.990,27.685)
C5: (9.312,128.842,26.637)
C4: (10.250,129.518,25.890)
P: (5.140,130.659,22.047)
C4': (8.925,131.740,22.022)
C2': (10.759,130.471,22.809)
O2': (11.821,131.291,22.382)
N1: (11.146,127.992,27.791)
N2: (13.312,128.569,27.240)
N3: (11.596,129.494,26.004)
N7: (8.026,129.141,26.204)
N9: (9.529,130.260,24.983)
O5': (6.708,130.809,22.292)
O3': (10.103,130.302,20.461)
OP1: (18.975,122.945,24.051)
OP2: (16.625,123.791,23.469)
C3': (18.436,127.341,26.459)
C1': (18.347,128.798,24.628)
C5': (19.598,125.626,24.900)
O4': (19.494,127.999,24.435)
C8: (17.113,128.444,22.416)
O2': (16.476,128.776,26.186)
C6: (17.378,131.507,20.705)
C5: (17.355,130.350,21.511)
C4: (17.993,130.426,22.736)
P: (18.097,123.978,23.445)
C4': (19.586,127.019,25.506)
C2': (17.419,127.963,25.514)
C2: (18.581,132.525,22.400)
N1: (18.010,132.600,21.191)
N3: (18.633,131.496,23.247)
N6: (16.816,131.578,19.496)
N7: (16.803,129.093,21.323)
N9: (17.832,129.190,23.317)
O5': (18.407,125.404,24.104)
O3': (18.830,128.389,27.360)
Image (generated by PyMOL):
PyMOL image
show in jmol