ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.361 131.958 22.477 1.00 60.09 O
ATOM 2 P G A 314 5.071 130.626 21.916 1.00 59.20 P
ATOM 3 OP1 G A 314 4.913 130.576 20.442 1.00 62.38 O
ATOM 4 OP2 G A 314 4.611 129.482 22.731 1.00 60.42 O
ATOM 5 O5' G A 314 6.615 130.842 22.236 1.00 58.89 O
ATOM 6 C5' G A 314 7.392 131.834 21.542 1.00 54.89 C
ATOM 7 C4' G A 314 8.842 131.735 21.946 1.00 54.38 C
ATOM 8 O4' G A 314 8.955 131.970 23.377 1.00 54.45 O
ATOM 9 C3' G A 314 9.514 130.386 21.726 1.00 53.28 C
ATOM 10 O3' G A 314 9.997 130.267 20.389 1.00 54.82 O
ATOM 11 C2' G A 314 10.653 130.434 22.739 1.00 52.53 C
ATOM 12 O2' G A 314 11.734 131.226 22.308 1.00 51.18 O
ATOM 13 C1' G A 314 9.989 131.160 23.909 1.00 53.98 C
ATOM 14 N9 G A 314 9.416 130.258 24.908 1.00 55.97 N
ATOM 15 C8 G A 314 8.085 130.004 25.143 1.00 55.82 C
ATOM 16 N7 G A 314 7.888 129.165 26.123 1.00 56.33 N
ATOM 17 C5 G A 314 9.166 128.840 26.560 1.00 57.16 C
ATOM 18 C6 G A 314 9.591 127.977 27.607 1.00 58.19 C
ATOM 19 O6 G A 314 8.897 127.303 28.385 1.00 59.21 O
ATOM 20 N1 G A 314 10.978 127.939 27.705 1.00 56.14 N
ATOM 21 C2 G A 314 11.847 128.634 26.903 1.00 55.85 C
ATOM 22 N2 G A 314 13.155 128.447 27.143 1.00 54.00 N
ATOM 23 N3 G A 314 11.465 129.446 25.932 1.00 55.12 N
ATOM 24 C4 G A 314 10.120 129.500 25.817 1.00 55.90 C
ATOM 25 P A A 315 10.271 128.812 19.745 1.00 58.29 P
ATOM 26 OP1 A A 315 10.880 129.031 18.408 1.00 57.00 O
ATOM 27 OP2 A A 315 9.038 127.992 19.867 1.00 58.71 O
ATOM 28 O5' A A 315 11.372 128.137 20.677 1.00 58.54 O
TER

ATOM 1 O3' U B 316 18.431 124.023 21.777 1.00 56.29 O
ATOM 2 P A B 317 17.949 123.961 23.314 1.00 54.11 P
ATOM 3 OP1 A B 317 18.783 122.912 23.952 1.00 57.03 O
ATOM 4 OP2 A B 317 16.473 123.844 23.349 1.00 53.34 O
ATOM 5 O5' A B 317 18.321 125.389 23.927 1.00 55.17 O
ATOM 6 C5' A B 317 19.518 125.581 24.721 1.00 53.02 C
ATOM 7 C4' A B 317 19.532 126.967 25.339 1.00 51.91 C
ATOM 8 O4' A B 317 19.447 127.955 24.276 1.00 53.97 O
ATOM 9 C3' A B 317 18.396 127.300 26.303 1.00 51.19 C
ATOM 10 O3' A B 317 18.819 128.323 27.212 1.00 50.79 O
ATOM 11 C2' A B 317 17.384 127.962 25.379 1.00 52.24 C
ATOM 12 O2' A B 317 16.486 128.796 26.084 1.00 49.44 O
ATOM 13 C1' A B 317 18.318 128.776 24.484 1.00 52.99 C
ATOM 14 N9 A B 317 17.799 129.171 23.175 1.00 55.62 N
ATOM 15 C8 A B 317 17.082 128.426 22.273 1.00 54.25 C
ATOM 16 N7 A B 317 16.780 129.074 21.178 1.00 55.03 N
ATOM 17 C5 A B 317 17.334 130.331 21.367 1.00 56.73 C
ATOM 18 C6 A B 317 17.362 131.489 20.561 1.00 57.40 C
ATOM 19 N6 A B 317 16.808 131.562 19.349 1.00 56.35 N
ATOM 20 N1 A B 317 17.990 132.580 21.052 1.00 56.56 N
ATOM 21 C2 A B 317 18.551 132.504 22.261 1.00 56.53 C
ATOM 22 N3 A B 317 18.596 131.477 23.108 1.00 57.12 N
ATOM 23 C4 A B 317 17.960 130.407 22.595 1.00 56.80 C
ATOM 24 P C B 318 19.618 127.950 28.557 1.00 48.86 P
ATOM 25 OP1 C B 318 19.558 129.176 29.387 1.00 46.22 O
ATOM 26 OP2 C B 318 20.934 127.354 28.217 1.00 44.32 O
ATOM 27 O5' C B 318 18.730 126.822 29.255 1.00 49.41 O
TER

Atoms:
OP1: (4.913,130.576,20.442)
OP2: (4.611,129.482,22.731)
C3': (9.514,130.386,21.726)
C1': (9.989,131.160,23.909)
C5': (7.392,131.834,21.542)
O6: (8.897,127.303,28.385)
O4': (8.955,131.970,23.377)
C8: (8.085,130.004,25.143)
C2: (11.847,128.634,26.903)
C6: (9.591,127.977,27.607)
C5: (9.166,128.840,26.560)
C4: (10.120,129.500,25.817)
P: (5.071,130.626,21.916)
C4': (8.842,131.735,21.946)
C2': (10.653,130.434,22.739)
O2': (11.734,131.226,22.308)
N1: (10.978,127.939,27.705)
N2: (13.155,128.447,27.143)
N3: (11.465,129.446,25.932)
N7: (7.888,129.165,26.123)
N9: (9.416,130.258,24.908)
O5': (6.615,130.842,22.236)
O3': (9.997,130.267,20.389)
OP1: (18.783,122.912,23.952)
OP2: (16.473,123.844,23.349)
C3': (18.396,127.300,26.303)
C1': (18.318,128.776,24.484)
C5': (19.518,125.581,24.721)
O4': (19.447,127.955,24.276)
C8: (17.082,128.426,22.273)
O2': (16.486,128.796,26.084)
C6: (17.362,131.489,20.561)
C5: (17.334,130.331,21.367)
C4: (17.960,130.407,22.595)
P: (17.949,123.961,23.314)
C4': (19.532,126.967,25.339)
C2': (17.384,127.962,25.379)
C2: (18.551,132.504,22.261)
N1: (17.990,132.580,21.052)
N3: (18.596,131.477,23.108)
N6: (16.808,131.562,19.349)
N7: (16.780,129.074,21.178)
N9: (17.799,129.171,23.175)
O5': (18.321,125.389,23.927)
O3': (18.819,128.323,27.212)
Image (generated by PyMOL):
PyMOL image
show in jmol