ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.433 132.099 22.508 1.00 61.14 O
ATOM 2 P G A 314 5.084 130.727 21.967 1.00 58.88 P
ATOM 3 OP1 G A 314 4.885 130.630 20.500 1.00 62.07 O
ATOM 4 OP2 G A 314 4.602 129.633 22.840 1.00 61.47 O
ATOM 5 O5' G A 314 6.646 130.905 22.225 1.00 58.31 O
ATOM 6 C5' G A 314 7.410 131.888 21.505 1.00 55.18 C
ATOM 7 C4' G A 314 8.862 131.824 21.909 1.00 54.10 C
ATOM 8 O4' G A 314 8.972 132.083 23.336 1.00 54.31 O
ATOM 9 C3' G A 314 9.555 130.484 21.707 1.00 53.01 C
ATOM 10 O3' G A 314 10.030 130.349 20.364 1.00 53.63 O
ATOM 11 C2' G A 314 10.694 130.567 22.718 1.00 52.10 C
ATOM 12 O2' G A 314 11.753 131.381 22.268 1.00 51.11 O
ATOM 13 C1' G A 314 10.016 131.294 23.882 1.00 53.26 C
ATOM 14 N9 G A 314 9.449 130.402 24.896 1.00 53.79 N
ATOM 15 C8 G A 314 8.118 130.162 25.139 1.00 53.74 C
ATOM 16 N7 G A 314 7.917 129.330 26.123 1.00 53.56 N
ATOM 17 C5 G A 314 9.193 128.992 26.555 1.00 54.87 C
ATOM 18 C6 G A 314 9.612 128.126 27.608 1.00 55.01 C
ATOM 19 O6 G A 314 8.911 127.456 28.384 1.00 55.15 O
ATOM 20 N1 G A 314 10.998 128.081 27.711 1.00 53.20 N
ATOM 21 C2 G A 314 11.872 128.769 26.908 1.00 53.55 C
ATOM 22 N2 G A 314 13.181 128.582 27.162 1.00 52.93 N
ATOM 23 N3 G A 314 11.497 129.577 25.927 1.00 53.15 N
ATOM 24 C4 G A 314 10.152 129.642 25.809 1.00 53.89 C
ATOM 25 P A A 315 10.399 128.890 19.771 1.00 55.72 P
ATOM 26 OP1 A A 315 11.064 129.093 18.462 1.00 53.73 O
ATOM 27 OP2 A A 315 9.202 128.010 19.863 1.00 54.50 O
ATOM 28 O5' A A 315 11.490 128.302 20.770 1.00 55.85 O
TER

ATOM 1 O3' U B 316 18.574 124.123 21.791 1.00 55.97 O
ATOM 2 P A B 317 18.125 124.102 23.342 1.00 54.06 P
ATOM 3 OP1 A B 317 19.012 123.096 23.987 1.00 55.10 O
ATOM 4 OP2 A B 317 16.652 123.944 23.427 1.00 50.66 O
ATOM 5 O5' A B 317 18.487 125.556 23.903 1.00 54.20 O
ATOM 6 C5' A B 317 19.641 125.760 24.760 1.00 51.76 C
ATOM 7 C4' A B 317 19.609 127.138 25.391 1.00 50.54 C
ATOM 8 O4' A B 317 19.521 128.137 24.337 1.00 52.49 O
ATOM 9 C3' A B 317 18.453 127.435 26.343 1.00 49.31 C
ATOM 10 O3' A B 317 18.848 128.446 27.281 1.00 49.71 O
ATOM 11 C2' A B 317 17.444 128.095 25.413 1.00 49.49 C
ATOM 12 O2' A B 317 16.524 128.919 26.101 1.00 46.13 O
ATOM 13 C1' A B 317 18.376 128.935 24.540 1.00 51.62 C
ATOM 14 N9 A B 317 17.859 129.340 23.234 1.00 54.59 N
ATOM 15 C8 A B 317 17.134 128.602 22.331 1.00 54.37 C
ATOM 16 N7 A B 317 16.829 129.256 21.240 1.00 55.98 N
ATOM 17 C5 A B 317 17.392 130.509 21.432 1.00 57.02 C
ATOM 18 C6 A B 317 17.427 131.666 20.629 1.00 57.85 C
ATOM 19 N6 A B 317 16.872 131.742 19.416 1.00 56.24 N
ATOM 20 N1 A B 317 18.064 132.752 21.121 1.00 57.75 N
ATOM 21 C2 A B 317 18.628 132.671 22.329 1.00 57.29 C
ATOM 22 N3 A B 317 18.669 131.641 23.173 1.00 58.19 N
ATOM 23 C4 A B 317 18.024 130.577 22.658 1.00 57.00 C
ATOM 24 P C B 318 19.653 128.062 28.625 1.00 48.63 P
ATOM 25 OP1 C B 318 19.613 129.306 29.437 1.00 45.99 O
ATOM 26 OP2 C B 318 20.966 127.445 28.288 1.00 42.61 O
ATOM 27 O5' C B 318 18.761 126.941 29.332 1.00 49.01 O
TER

Atoms:
OP1: (4.885,130.630,20.500)
OP2: (4.602,129.633,22.840)
C3': (9.555,130.484,21.707)
C1': (10.016,131.294,23.882)
C5': (7.410,131.888,21.505)
O6: (8.911,127.456,28.384)
O4': (8.972,132.083,23.336)
C8: (8.118,130.162,25.139)
C2: (11.872,128.769,26.908)
C6: (9.612,128.126,27.608)
C5: (9.193,128.992,26.555)
C4: (10.152,129.642,25.809)
P: (5.084,130.727,21.967)
C4': (8.862,131.824,21.909)
C2': (10.694,130.567,22.718)
O2': (11.753,131.381,22.268)
N1: (10.998,128.081,27.711)
N2: (13.181,128.582,27.162)
N3: (11.497,129.577,25.927)
N7: (7.917,129.330,26.123)
N9: (9.449,130.402,24.896)
O5': (6.646,130.905,22.225)
O3': (10.030,130.349,20.364)
OP1: (19.012,123.096,23.987)
OP2: (16.652,123.944,23.427)
C3': (18.453,127.435,26.343)
C1': (18.376,128.935,24.540)
C5': (19.641,125.760,24.760)
O4': (19.521,128.137,24.337)
C8: (17.134,128.602,22.331)
O2': (16.524,128.919,26.101)
C6: (17.427,131.666,20.629)
C5: (17.392,130.509,21.432)
C4: (18.024,130.577,22.658)
P: (18.125,124.102,23.342)
C4': (19.609,127.138,25.391)
C2': (17.444,128.095,25.413)
C2: (18.628,132.671,22.329)
N1: (18.064,132.752,21.121)
N3: (18.669,131.641,23.173)
N6: (16.872,131.742,19.416)
N7: (16.829,129.256,21.240)
N9: (17.859,129.340,23.234)
O5': (18.487,125.556,23.903)
O3': (18.848,128.446,27.281)
Image (generated by PyMOL):
PyMOL image
show in jmol