ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.370 131.901 22.580 1.00 52.88 O
ATOM 2 P G A 314 5.107 130.576 22.029 1.00 52.90 P
ATOM 3 OP1 G A 314 4.966 130.529 20.553 1.00 57.08 O
ATOM 4 OP2 G A 314 4.652 129.424 22.842 1.00 55.31 O
ATOM 5 O5' G A 314 6.650 130.808 22.358 1.00 53.02 O
ATOM 6 C5' G A 314 7.427 131.788 21.647 1.00 50.17 C
ATOM 7 C4' G A 314 8.880 131.691 22.046 1.00 50.46 C
ATOM 8 O4' G A 314 8.999 131.923 23.477 1.00 51.05 O
ATOM 9 C3' G A 314 9.541 130.338 21.824 1.00 49.66 C
ATOM 10 O3' G A 314 10.020 130.211 20.487 1.00 50.16 O
ATOM 11 C2' G A 314 10.683 130.372 22.832 1.00 48.55 C
ATOM 12 O2' G A 314 11.774 131.143 22.389 1.00 47.65 O
ATOM 13 C1' G A 314 10.030 131.105 24.005 1.00 50.26 C
ATOM 14 N9 G A 314 9.449 130.206 25.001 1.00 51.58 N
ATOM 15 C8 G A 314 8.116 129.944 25.211 1.00 51.07 C
ATOM 16 N7 G A 314 7.907 129.107 26.188 1.00 51.61 N
ATOM 17 C5 G A 314 9.178 128.789 26.649 1.00 52.71 C
ATOM 18 C6 G A 314 9.588 127.928 27.704 1.00 52.56 C
ATOM 19 O6 G A 314 8.885 127.238 28.453 1.00 53.02 O
ATOM 20 N1 G A 314 10.971 127.914 27.842 1.00 51.42 N
ATOM 21 C2 G A 314 11.850 128.624 27.065 1.00 51.42 C
ATOM 22 N2 G A 314 13.152 128.478 27.356 1.00 50.60 N
ATOM 23 N3 G A 314 11.483 129.419 26.075 1.00 50.81 N
ATOM 24 C4 G A 314 10.141 129.457 25.927 1.00 51.51 C
ATOM 25 P A A 315 10.321 128.754 19.871 1.00 52.94 P
ATOM 26 OP1 A A 315 10.962 128.944 18.546 1.00 51.34 O
ATOM 27 OP2 A A 315 9.085 127.934 19.980 1.00 53.55 O
ATOM 28 O5' A A 315 11.410 128.110 20.839 1.00 52.40 O
TER

ATOM 1 O3' U B 316 18.519 123.957 21.855 1.00 51.03 O
ATOM 2 P A B 317 18.032 123.869 23.390 1.00 49.42 P
ATOM 3 OP1 A B 317 18.877 122.822 24.017 1.00 51.68 O
ATOM 4 OP2 A B 317 16.556 123.731 23.419 1.00 48.39 O
ATOM 5 O5' A B 317 18.378 125.298 24.022 1.00 49.12 O
ATOM 6 C5' A B 317 19.559 125.499 24.837 1.00 45.91 C
ATOM 7 C4' A B 317 19.551 126.887 25.453 1.00 44.54 C
ATOM 8 O4' A B 317 19.456 127.874 24.390 1.00 46.23 O
ATOM 9 C3' A B 317 18.407 127.208 26.413 1.00 43.42 C
ATOM 10 O3' A B 317 18.813 128.251 27.308 1.00 43.60 O
ATOM 11 C2' A B 317 17.390 127.853 25.483 1.00 44.73 C
ATOM 12 O2' A B 317 16.472 128.682 26.169 1.00 40.78 O
ATOM 13 C1' A B 317 18.319 128.684 24.600 1.00 45.39 C
ATOM 14 N9 A B 317 17.794 129.078 23.296 1.00 49.80 N
ATOM 15 C8 A B 317 17.064 128.337 22.400 1.00 48.77 C
ATOM 16 N7 A B 317 16.756 128.987 21.307 1.00 50.62 N
ATOM 17 C5 A B 317 17.321 130.239 21.492 1.00 51.65 C
ATOM 18 C6 A B 317 17.353 131.390 20.687 1.00 51.95 C
ATOM 19 N6 A B 317 16.789 131.463 19.480 1.00 51.74 N
ATOM 20 N1 A B 317 17.994 132.476 21.170 1.00 52.21 N
ATOM 21 C2 A B 317 18.569 132.399 22.375 1.00 52.39 C
ATOM 22 N3 A B 317 18.614 131.373 23.222 1.00 52.85 N
ATOM 23 C4 A B 317 17.961 130.311 22.714 1.00 51.97 C
ATOM 24 P C B 318 19.608 127.913 28.663 1.00 41.57 P
ATOM 25 OP1 C B 318 19.541 129.174 29.439 1.00 37.36 O
ATOM 26 OP2 C B 318 20.930 127.318 28.333 1.00 36.22 O
ATOM 27 O5' C B 318 18.731 126.797 29.396 1.00 41.76 O
TER

Atoms:
OP1: (4.966,130.529,20.553)
OP2: (4.652,129.424,22.842)
C3': (9.541,130.338,21.824)
C1': (10.030,131.105,24.005)
C5': (7.427,131.788,21.647)
O6: (8.885,127.238,28.453)
O4': (8.999,131.923,23.477)
C8: (8.116,129.944,25.211)
C2: (11.850,128.624,27.065)
C6: (9.588,127.928,27.704)
C5: (9.178,128.789,26.649)
C4: (10.141,129.457,25.927)
P: (5.107,130.576,22.029)
C4': (8.880,131.691,22.046)
C2': (10.683,130.372,22.832)
O2': (11.774,131.143,22.389)
N1: (10.971,127.914,27.842)
N2: (13.152,128.478,27.356)
N3: (11.483,129.419,26.075)
N7: (7.907,129.107,26.188)
N9: (9.449,130.206,25.001)
O5': (6.650,130.808,22.358)
O3': (10.020,130.211,20.487)
OP1: (18.877,122.822,24.017)
OP2: (16.556,123.731,23.419)
C3': (18.407,127.208,26.413)
C1': (18.319,128.684,24.600)
C5': (19.559,125.499,24.837)
O4': (19.456,127.874,24.390)
C8: (17.064,128.337,22.400)
O2': (16.472,128.682,26.169)
C6: (17.353,131.390,20.687)
C5: (17.321,130.239,21.492)
C4: (17.961,130.311,22.714)
P: (18.032,123.869,23.390)
C4': (19.551,126.887,25.453)
C2': (17.390,127.853,25.483)
C2: (18.569,132.399,22.375)
N1: (17.994,132.476,21.170)
N3: (18.614,131.373,23.222)
N6: (16.789,131.463,19.480)
N7: (16.756,128.987,21.307)
N9: (17.794,129.078,23.296)
O5': (18.378,125.298,24.022)
O3': (18.813,128.251,27.308)
Image (generated by PyMOL):
PyMOL image
show in jmol