ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.803 132.308 22.288 1.00 48.07 O
ATOM 2 P G A 314 5.475 130.950 21.749 1.00 47.01 P
ATOM 3 OP1 G A 314 5.315 130.934 20.272 1.00 46.99 O
ATOM 4 OP2 G A 314 4.954 129.823 22.557 1.00 44.91 O
ATOM 5 O5' G A 314 7.026 131.120 22.069 1.00 46.06 O
ATOM 6 C5' G A 314 7.817 132.106 21.382 1.00 43.41 C
ATOM 7 C4' G A 314 9.265 132.000 21.793 1.00 42.16 C
ATOM 8 O4' G A 314 9.377 132.210 23.226 1.00 43.29 O
ATOM 9 C3' G A 314 9.932 130.653 21.559 1.00 41.40 C
ATOM 10 O3' G A 314 10.403 130.544 20.220 1.00 40.30 O
ATOM 11 C2' G A 314 11.082 130.696 22.555 1.00 40.96 C
ATOM 12 O2' G A 314 12.147 131.497 22.101 1.00 41.48 O
ATOM 13 C1' G A 314 10.433 131.412 23.738 1.00 43.22 C
ATOM 14 N9 G A 314 9.890 130.494 24.736 1.00 45.25 N
ATOM 15 C8 G A 314 8.567 130.203 24.972 1.00 45.09 C
ATOM 16 N7 G A 314 8.397 129.358 25.949 1.00 44.93 N
ATOM 17 C5 G A 314 9.683 129.068 26.385 1.00 45.27 C
ATOM 18 C6 G A 314 10.132 128.220 27.429 1.00 45.19 C
ATOM 19 O6 G A 314 9.461 127.531 28.205 1.00 46.14 O
ATOM 20 N1 G A 314 11.517 128.218 27.526 1.00 44.79 N
ATOM 21 C2 G A 314 12.366 128.934 26.727 1.00 43.93 C
ATOM 22 N2 G A 314 13.674 128.782 26.971 1.00 42.82 N
ATOM 23 N3 G A 314 11.964 129.735 25.757 1.00 45.19 N
ATOM 24 C4 G A 314 10.617 129.754 25.642 1.00 45.29 C
ATOM 25 P A A 315 10.721 129.098 19.592 1.00 42.33 P
ATOM 26 OP1 A A 315 11.365 129.319 18.274 1.00 39.89 O
ATOM 27 OP2 A A 315 9.500 128.253 19.685 1.00 43.79 O
ATOM 28 O5' A A 315 11.798 128.455 20.572 1.00 43.00 O
TER

ATOM 1 O3' U B 316 18.899 124.259 21.613 1.00 40.56 O
ATOM 2 P A B 317 18.421 124.126 23.147 1.00 40.39 P
ATOM 3 OP1 A B 317 19.300 123.102 23.766 1.00 40.41 O
ATOM 4 OP2 A B 317 16.952 123.940 23.171 1.00 40.49 O
ATOM 5 O5' A B 317 18.705 125.552 23.809 1.00 39.33 O
ATOM 6 C5' A B 317 19.891 125.790 24.599 1.00 37.08 C
ATOM 7 C4' A B 317 19.883 127.199 25.161 1.00 36.83 C
ATOM 8 O4' A B 317 19.799 128.154 24.066 1.00 38.30 O
ATOM 9 C3' A B 317 18.732 127.543 26.102 1.00 35.59 C
ATOM 10 O3' A B 317 19.128 128.583 27.005 1.00 35.80 O
ATOM 11 C2' A B 317 17.731 128.178 25.148 1.00 36.80 C
ATOM 12 O2' A B 317 16.822 129.038 25.801 1.00 36.90 O
ATOM 13 C1' A B 317 18.672 128.981 24.255 1.00 38.96 C
ATOM 14 N9 A B 317 18.138 129.362 22.951 1.00 42.76 N
ATOM 15 C8 A B 317 17.369 128.630 22.080 1.00 43.47 C
ATOM 16 N7 A B 317 17.042 129.278 20.989 1.00 45.08 N
ATOM 17 C5 A B 317 17.640 130.520 21.148 1.00 45.72 C
ATOM 18 C6 A B 317 17.673 131.665 20.335 1.00 45.64 C
ATOM 19 N6 A B 317 17.072 131.749 19.149 1.00 45.01 N
ATOM 20 N1 A B 317 18.358 132.736 20.789 1.00 47.07 N
ATOM 21 C2 A B 317 18.972 132.651 21.978 1.00 46.65 C
ATOM 22 N3 A B 317 19.017 131.631 22.830 1.00 46.42 N
ATOM 23 C4 A B 317 18.322 130.584 22.351 1.00 45.72 C
ATOM 24 P C B 318 19.962 128.244 28.338 1.00 35.99 P
ATOM 25 OP1 C B 318 19.950 129.500 29.128 1.00 30.48 O
ATOM 26 OP2 C B 318 21.262 127.621 27.952 1.00 30.01 O
ATOM 27 O5' C B 318 19.094 127.151 29.116 1.00 35.38 O
TER

Atoms:
OP1: (5.315,130.934,20.272)
OP2: (4.954,129.823,22.557)
C3': (9.932,130.653,21.559)
C1': (10.433,131.412,23.738)
C5': (7.817,132.106,21.382)
O6: (9.461,127.531,28.205)
O4': (9.377,132.210,23.226)
C8: (8.567,130.203,24.972)
C2: (12.366,128.934,26.727)
C6: (10.132,128.220,27.429)
C5: (9.683,129.068,26.385)
C4: (10.617,129.754,25.642)
P: (5.475,130.950,21.749)
C4': (9.265,132.000,21.793)
C2': (11.082,130.696,22.555)
O2': (12.147,131.497,22.101)
N1: (11.517,128.218,27.526)
N2: (13.674,128.782,26.971)
N3: (11.964,129.735,25.757)
N7: (8.397,129.358,25.949)
N9: (9.890,130.494,24.736)
O5': (7.026,131.120,22.069)
O3': (10.403,130.544,20.220)
OP1: (19.300,123.102,23.766)
OP2: (16.952,123.940,23.171)
C3': (18.732,127.543,26.102)
C1': (18.672,128.981,24.255)
C5': (19.891,125.790,24.599)
O4': (19.799,128.154,24.066)
C8: (17.369,128.630,22.080)
O2': (16.822,129.038,25.801)
C6: (17.673,131.665,20.335)
C5: (17.640,130.520,21.148)
C4: (18.322,130.584,22.351)
P: (18.421,124.126,23.147)
C4': (19.883,127.199,25.161)
C2': (17.731,128.178,25.148)
C2: (18.972,132.651,21.978)
N1: (18.358,132.736,20.789)
N3: (19.017,131.631,22.830)
N6: (17.072,131.749,19.149)
N7: (17.042,129.278,20.989)
N9: (18.138,129.362,22.951)
O5': (18.705,125.552,23.809)
O3': (19.128,128.583,27.005)
Image (generated by PyMOL):
PyMOL image
show in jmol