Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0314:0317
Extra
PDB:
ATOM 1 O3' U A 313 4.866 132.693 22.328 1.00 62.65 O
ATOM 2 P G A 314 5.610 131.371 21.803 1.00 62.24 P
ATOM 3 OP1 G A 314 5.476 131.346 20.324 1.00 63.92 O
ATOM 4 OP2 G A 314 5.117 130.227 22.606 1.00 61.69 O
ATOM 5 O5' G A 314 7.147 131.605 22.149 1.00 61.94 O
ATOM 6 C5' G A 314 7.936 132.575 21.429 1.00 59.17 C
ATOM 7 C4' G A 314 9.391 132.468 21.826 1.00 57.17 C
ATOM 8 O4' G A 314 9.513 132.683 23.255 1.00 57.71 O
ATOM 9 C3' G A 314 10.044 131.116 21.598 1.00 56.66 C
ATOM 10 O3' G A 314 10.511 131.005 20.264 1.00 56.05 O
ATOM 11 C2' G A 314 11.197 131.145 22.591 1.00 57.38 C
ATOM 12 O2' G A 314 12.296 131.912 22.149 1.00 57.53 O
ATOM 13 C1' G A 314 10.556 131.874 23.770 1.00 59.07 C
ATOM 14 N9 G A 314 10.006 130.971 24.779 1.00 61.33 N
ATOM 15 C8 G A 314 8.681 130.690 25.022 1.00 60.81 C
ATOM 16 N7 G A 314 8.508 129.855 26.009 1.00 61.56 N
ATOM 17 C5 G A 314 9.796 129.559 26.442 1.00 62.99 C
ATOM 18 C6 G A 314 10.247 128.713 27.493 1.00 63.33 C
ATOM 19 O6 G A 314 9.577 128.036 28.279 1.00 65.16 O
ATOM 20 N1 G A 314 11.633 128.705 27.585 1.00 63.13 N
ATOM 21 C2 G A 314 12.483 129.421 26.784 1.00 62.44 C
ATOM 22 N2 G A 314 13.789 129.287 27.044 1.00 61.35 N
ATOM 23 N3 G A 314 12.081 130.212 25.805 1.00 62.90 N
ATOM 24 C4 G A 314 10.732 130.234 25.692 1.00 62.56 C
ATOM 25 P A A 315 10.802 129.558 19.631 1.00 57.66 P
ATOM 26 OP1 A A 315 11.448 129.775 18.311 1.00 55.44 O
ATOM 27 OP2 A A 315 9.557 128.756 19.729 1.00 57.46 O
ATOM 28 O5' A A 315 11.887 128.895 20.587 1.00 59.36 O
TER
ATOM 1 O3' U B 316 19.038 124.724 21.582 1.00 56.94 O
ATOM 2 P A B 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A B 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A B 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A B 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A B 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A B 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A B 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A B 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A B 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A B 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A B 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A B 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A B 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A B 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A B 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A B 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A B 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A B 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A B 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A B 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A B 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A B 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C B 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C B 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C B 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C B 318 19.204 127.515 29.138 1.00 51.63 O
TER
ATOM 2 P G A 314 5.610 131.371 21.803 1.00 62.24 P
ATOM 3 OP1 G A 314 5.476 131.346 20.324 1.00 63.92 O
ATOM 4 OP2 G A 314 5.117 130.227 22.606 1.00 61.69 O
ATOM 5 O5' G A 314 7.147 131.605 22.149 1.00 61.94 O
ATOM 6 C5' G A 314 7.936 132.575 21.429 1.00 59.17 C
ATOM 7 C4' G A 314 9.391 132.468 21.826 1.00 57.17 C
ATOM 8 O4' G A 314 9.513 132.683 23.255 1.00 57.71 O
ATOM 9 C3' G A 314 10.044 131.116 21.598 1.00 56.66 C
ATOM 10 O3' G A 314 10.511 131.005 20.264 1.00 56.05 O
ATOM 11 C2' G A 314 11.197 131.145 22.591 1.00 57.38 C
ATOM 12 O2' G A 314 12.296 131.912 22.149 1.00 57.53 O
ATOM 13 C1' G A 314 10.556 131.874 23.770 1.00 59.07 C
ATOM 14 N9 G A 314 10.006 130.971 24.779 1.00 61.33 N
ATOM 15 C8 G A 314 8.681 130.690 25.022 1.00 60.81 C
ATOM 16 N7 G A 314 8.508 129.855 26.009 1.00 61.56 N
ATOM 17 C5 G A 314 9.796 129.559 26.442 1.00 62.99 C
ATOM 18 C6 G A 314 10.247 128.713 27.493 1.00 63.33 C
ATOM 19 O6 G A 314 9.577 128.036 28.279 1.00 65.16 O
ATOM 20 N1 G A 314 11.633 128.705 27.585 1.00 63.13 N
ATOM 21 C2 G A 314 12.483 129.421 26.784 1.00 62.44 C
ATOM 22 N2 G A 314 13.789 129.287 27.044 1.00 61.35 N
ATOM 23 N3 G A 314 12.081 130.212 25.805 1.00 62.90 N
ATOM 24 C4 G A 314 10.732 130.234 25.692 1.00 62.56 C
ATOM 25 P A A 315 10.802 129.558 19.631 1.00 57.66 P
ATOM 26 OP1 A A 315 11.448 129.775 18.311 1.00 55.44 O
ATOM 27 OP2 A A 315 9.557 128.756 19.729 1.00 57.46 O
ATOM 28 O5' A A 315 11.887 128.895 20.587 1.00 59.36 O
TER
ATOM 1 O3' U B 316 19.038 124.724 21.582 1.00 56.94 O
ATOM 2 P A B 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A B 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A B 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A B 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A B 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A B 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A B 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A B 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A B 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A B 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A B 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A B 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A B 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A B 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A B 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A B 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A B 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A B 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A B 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A B 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A B 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A B 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C B 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C B 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C B 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C B 318 19.204 127.515 29.138 1.00 51.63 O
TER
Atoms:
OP1: (5.476,131.346,20.324)
OP2: (5.117,130.227,22.606)
C3': (10.044,131.116,21.598)
C1': (10.556,131.874,23.770)
C5': (7.936,132.575,21.429)
O6: (9.577,128.036,28.279)
O4': (9.513,132.683,23.255)
C8: (8.681,130.690,25.022)
C2: (12.483,129.421,26.784)
C6: (10.247,128.713,27.493)
C5: (9.796,129.559,26.442)
C4: (10.732,130.234,25.692)
P: (5.610,131.371,21.803)
C4': (9.391,132.468,21.826)
C2': (11.197,131.145,22.591)
O2': (12.296,131.912,22.149)
N1: (11.633,128.705,27.585)
N2: (13.789,129.287,27.044)
N3: (12.081,130.212,25.805)
N7: (8.508,129.855,26.009)
N9: (10.006,130.971,24.779)
O5': (7.147,131.605,22.149)
O3': (10.511,131.005,20.264)
OP2: (5.117,130.227,22.606)
C3': (10.044,131.116,21.598)
C1': (10.556,131.874,23.770)
C5': (7.936,132.575,21.429)
O6: (9.577,128.036,28.279)
O4': (9.513,132.683,23.255)
C8: (8.681,130.690,25.022)
C2: (12.483,129.421,26.784)
C6: (10.247,128.713,27.493)
C5: (9.796,129.559,26.442)
C4: (10.732,130.234,25.692)
P: (5.610,131.371,21.803)
C4': (9.391,132.468,21.826)
C2': (11.197,131.145,22.591)
O2': (12.296,131.912,22.149)
N1: (11.633,128.705,27.585)
N2: (13.789,129.287,27.044)
N3: (12.081,130.212,25.805)
N7: (8.508,129.855,26.009)
N9: (10.006,130.971,24.779)
O5': (7.147,131.605,22.149)
O3': (10.511,131.005,20.264)
OP1: (19.418,123.551,23.728)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
Image (generated by PyMOL):