Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0314:0317
Extra
PDB:
ATOM 1 O3' U A 313 5.150 132.916 22.518 1.00 70.86 O
ATOM 2 P G A 314 5.856 131.557 22.034 1.00 70.49 P
ATOM 3 OP1 G A 314 5.723 131.483 20.558 1.00 71.52 O
ATOM 4 OP2 G A 314 5.364 130.434 22.876 1.00 70.07 O
ATOM 5 O5' G A 314 7.400 131.781 22.344 1.00 70.72 O
ATOM 6 C5' G A 314 8.159 132.781 21.641 1.00 68.56 C
ATOM 7 C4' G A 314 9.592 132.750 22.098 1.00 67.57 C
ATOM 8 O4' G A 314 9.631 133.013 23.522 1.00 68.11 O
ATOM 9 C3' G A 314 10.289 131.409 21.932 1.00 66.61 C
ATOM 10 O3' G A 314 10.847 131.316 20.627 1.00 67.93 O
ATOM 11 C2' G A 314 11.370 131.477 22.999 1.00 67.31 C
ATOM 12 O2' G A 314 12.481 132.253 22.608 1.00 64.93 O
ATOM 13 C1' G A 314 10.639 132.220 24.121 1.00 69.00 C
ATOM 14 N9 G A 314 10.019 131.325 25.099 1.00 70.44 N
ATOM 15 C8 G A 314 8.678 131.107 25.311 1.00 69.61 C
ATOM 16 N7 G A 314 8.445 130.229 26.249 1.00 70.43 N
ATOM 17 C5 G A 314 9.708 129.842 26.681 1.00 71.36 C
ATOM 18 C6 G A 314 10.100 128.900 27.673 1.00 72.01 C
ATOM 19 O6 G A 314 9.381 128.173 28.379 1.00 73.26 O
ATOM 20 N1 G A 314 11.485 128.837 27.798 1.00 70.82 N
ATOM 21 C2 G A 314 12.379 129.574 27.067 1.00 70.00 C
ATOM 22 N2 G A 314 13.673 129.392 27.350 1.00 70.09 N
ATOM 23 N3 G A 314 12.032 130.432 26.131 1.00 70.50 N
ATOM 24 C4 G A 314 10.689 130.518 25.992 1.00 70.88 C
ATOM 25 P A A 315 10.942 129.895 19.877 1.00 68.67 P
ATOM 26 OP1 A A 315 11.419 130.192 18.502 1.00 67.50 O
ATOM 27 OP2 A A 315 9.665 129.151 20.076 1.00 69.47 O
ATOM 28 O5' A A 315 12.106 129.106 20.631 1.00 70.04 O
TER
ATOM 1 O3' U B 316 19.147 124.933 21.744 1.00 66.55 O
ATOM 2 P A B 317 18.712 124.785 23.286 1.00 65.48 P
ATOM 3 OP1 A B 317 19.586 123.733 23.871 1.00 62.93 O
ATOM 4 OP2 A B 317 17.232 124.625 23.335 1.00 64.88 O
ATOM 5 O5' A B 317 19.041 126.201 23.943 1.00 62.82 O
ATOM 6 C5' A B 317 20.248 126.412 24.693 1.00 61.27 C
ATOM 7 C4' A B 317 20.261 127.798 25.292 1.00 59.80 C
ATOM 8 O4' A B 317 20.189 128.773 24.218 1.00 60.44 O
ATOM 9 C3' A B 317 19.110 128.131 26.238 1.00 59.67 C
ATOM 10 O3' A B 317 19.537 129.127 27.188 1.00 61.37 O
ATOM 11 C2' A B 317 18.122 128.794 25.283 1.00 59.48 C
ATOM 12 O2' A B 317 17.177 129.634 25.914 1.00 60.15 O
ATOM 13 C1' A B 317 19.081 129.615 24.428 1.00 60.70 C
ATOM 14 N9 A B 317 18.591 130.091 23.134 1.00 62.72 N
ATOM 15 C8 A B 317 17.889 129.414 22.166 1.00 63.55 C
ATOM 16 N7 A B 317 17.585 130.147 21.124 1.00 64.67 N
ATOM 17 C5 A B 317 18.125 131.392 21.423 1.00 65.69 C
ATOM 18 C6 A B 317 18.138 132.615 20.724 1.00 65.79 C
ATOM 19 N6 A B 317 17.560 132.795 19.534 1.00 65.43 N
ATOM 20 N1 A B 317 18.771 133.662 21.300 1.00 65.68 N
ATOM 21 C2 A B 317 19.342 133.484 22.497 1.00 65.39 C
ATOM 22 N3 A B 317 19.390 132.390 23.254 1.00 64.63 N
ATOM 23 C4 A B 317 18.756 131.367 22.654 1.00 64.47 C
ATOM 24 P C B 318 20.344 128.715 28.530 1.00 60.21 P
ATOM 25 OP1 C B 318 20.364 129.949 29.355 1.00 59.21 O
ATOM 26 OP2 C B 318 21.629 128.048 28.160 1.00 56.64 O
ATOM 27 O5' C B 318 19.417 127.664 29.289 1.00 58.83 O
TER
ATOM 2 P G A 314 5.856 131.557 22.034 1.00 70.49 P
ATOM 3 OP1 G A 314 5.723 131.483 20.558 1.00 71.52 O
ATOM 4 OP2 G A 314 5.364 130.434 22.876 1.00 70.07 O
ATOM 5 O5' G A 314 7.400 131.781 22.344 1.00 70.72 O
ATOM 6 C5' G A 314 8.159 132.781 21.641 1.00 68.56 C
ATOM 7 C4' G A 314 9.592 132.750 22.098 1.00 67.57 C
ATOM 8 O4' G A 314 9.631 133.013 23.522 1.00 68.11 O
ATOM 9 C3' G A 314 10.289 131.409 21.932 1.00 66.61 C
ATOM 10 O3' G A 314 10.847 131.316 20.627 1.00 67.93 O
ATOM 11 C2' G A 314 11.370 131.477 22.999 1.00 67.31 C
ATOM 12 O2' G A 314 12.481 132.253 22.608 1.00 64.93 O
ATOM 13 C1' G A 314 10.639 132.220 24.121 1.00 69.00 C
ATOM 14 N9 G A 314 10.019 131.325 25.099 1.00 70.44 N
ATOM 15 C8 G A 314 8.678 131.107 25.311 1.00 69.61 C
ATOM 16 N7 G A 314 8.445 130.229 26.249 1.00 70.43 N
ATOM 17 C5 G A 314 9.708 129.842 26.681 1.00 71.36 C
ATOM 18 C6 G A 314 10.100 128.900 27.673 1.00 72.01 C
ATOM 19 O6 G A 314 9.381 128.173 28.379 1.00 73.26 O
ATOM 20 N1 G A 314 11.485 128.837 27.798 1.00 70.82 N
ATOM 21 C2 G A 314 12.379 129.574 27.067 1.00 70.00 C
ATOM 22 N2 G A 314 13.673 129.392 27.350 1.00 70.09 N
ATOM 23 N3 G A 314 12.032 130.432 26.131 1.00 70.50 N
ATOM 24 C4 G A 314 10.689 130.518 25.992 1.00 70.88 C
ATOM 25 P A A 315 10.942 129.895 19.877 1.00 68.67 P
ATOM 26 OP1 A A 315 11.419 130.192 18.502 1.00 67.50 O
ATOM 27 OP2 A A 315 9.665 129.151 20.076 1.00 69.47 O
ATOM 28 O5' A A 315 12.106 129.106 20.631 1.00 70.04 O
TER
ATOM 1 O3' U B 316 19.147 124.933 21.744 1.00 66.55 O
ATOM 2 P A B 317 18.712 124.785 23.286 1.00 65.48 P
ATOM 3 OP1 A B 317 19.586 123.733 23.871 1.00 62.93 O
ATOM 4 OP2 A B 317 17.232 124.625 23.335 1.00 64.88 O
ATOM 5 O5' A B 317 19.041 126.201 23.943 1.00 62.82 O
ATOM 6 C5' A B 317 20.248 126.412 24.693 1.00 61.27 C
ATOM 7 C4' A B 317 20.261 127.798 25.292 1.00 59.80 C
ATOM 8 O4' A B 317 20.189 128.773 24.218 1.00 60.44 O
ATOM 9 C3' A B 317 19.110 128.131 26.238 1.00 59.67 C
ATOM 10 O3' A B 317 19.537 129.127 27.188 1.00 61.37 O
ATOM 11 C2' A B 317 18.122 128.794 25.283 1.00 59.48 C
ATOM 12 O2' A B 317 17.177 129.634 25.914 1.00 60.15 O
ATOM 13 C1' A B 317 19.081 129.615 24.428 1.00 60.70 C
ATOM 14 N9 A B 317 18.591 130.091 23.134 1.00 62.72 N
ATOM 15 C8 A B 317 17.889 129.414 22.166 1.00 63.55 C
ATOM 16 N7 A B 317 17.585 130.147 21.124 1.00 64.67 N
ATOM 17 C5 A B 317 18.125 131.392 21.423 1.00 65.69 C
ATOM 18 C6 A B 317 18.138 132.615 20.724 1.00 65.79 C
ATOM 19 N6 A B 317 17.560 132.795 19.534 1.00 65.43 N
ATOM 20 N1 A B 317 18.771 133.662 21.300 1.00 65.68 N
ATOM 21 C2 A B 317 19.342 133.484 22.497 1.00 65.39 C
ATOM 22 N3 A B 317 19.390 132.390 23.254 1.00 64.63 N
ATOM 23 C4 A B 317 18.756 131.367 22.654 1.00 64.47 C
ATOM 24 P C B 318 20.344 128.715 28.530 1.00 60.21 P
ATOM 25 OP1 C B 318 20.364 129.949 29.355 1.00 59.21 O
ATOM 26 OP2 C B 318 21.629 128.048 28.160 1.00 56.64 O
ATOM 27 O5' C B 318 19.417 127.664 29.289 1.00 58.83 O
TER
Atoms:
OP1: (5.723,131.483,20.558)
OP2: (5.364,130.434,22.876)
C3': (10.289,131.409,21.932)
C1': (10.639,132.220,24.121)
C5': (8.159,132.781,21.641)
O6: (9.381,128.173,28.379)
O4': (9.631,133.013,23.522)
C8: (8.678,131.107,25.311)
C2: (12.379,129.574,27.067)
C6: (10.100,128.900,27.673)
C5: (9.708,129.842,26.681)
C4: (10.689,130.518,25.992)
P: (5.856,131.557,22.034)
C4': (9.592,132.750,22.098)
C2': (11.370,131.477,22.999)
O2': (12.481,132.253,22.608)
N1: (11.485,128.837,27.798)
N2: (13.673,129.392,27.350)
N3: (12.032,130.432,26.131)
N7: (8.445,130.229,26.249)
N9: (10.019,131.325,25.099)
O5': (7.400,131.781,22.344)
O3': (10.847,131.316,20.627)
OP2: (5.364,130.434,22.876)
C3': (10.289,131.409,21.932)
C1': (10.639,132.220,24.121)
C5': (8.159,132.781,21.641)
O6: (9.381,128.173,28.379)
O4': (9.631,133.013,23.522)
C8: (8.678,131.107,25.311)
C2: (12.379,129.574,27.067)
C6: (10.100,128.900,27.673)
C5: (9.708,129.842,26.681)
C4: (10.689,130.518,25.992)
P: (5.856,131.557,22.034)
C4': (9.592,132.750,22.098)
C2': (11.370,131.477,22.999)
O2': (12.481,132.253,22.608)
N1: (11.485,128.837,27.798)
N2: (13.673,129.392,27.350)
N3: (12.032,130.432,26.131)
N7: (8.445,130.229,26.249)
N9: (10.019,131.325,25.099)
O5': (7.400,131.781,22.344)
O3': (10.847,131.316,20.627)
OP1: (19.586,123.733,23.871)
OP2: (17.232,124.625,23.335)
C3': (19.110,128.131,26.238)
C1': (19.081,129.615,24.428)
C5': (20.248,126.412,24.693)
O4': (20.189,128.773,24.218)
C8: (17.889,129.414,22.166)
O2': (17.177,129.634,25.914)
C6: (18.138,132.615,20.724)
C5: (18.125,131.392,21.423)
C4: (18.756,131.367,22.654)
P: (18.712,124.785,23.286)
C4': (20.261,127.798,25.292)
C2': (18.122,128.794,25.283)
C2: (19.342,133.484,22.497)
N1: (18.771,133.662,21.300)
N3: (19.390,132.390,23.254)
N6: (17.560,132.795,19.534)
N7: (17.585,130.147,21.124)
N9: (18.591,130.091,23.134)
O5': (19.041,126.201,23.943)
O3': (19.537,129.127,27.188)
OP2: (17.232,124.625,23.335)
C3': (19.110,128.131,26.238)
C1': (19.081,129.615,24.428)
C5': (20.248,126.412,24.693)
O4': (20.189,128.773,24.218)
C8: (17.889,129.414,22.166)
O2': (17.177,129.634,25.914)
C6: (18.138,132.615,20.724)
C5: (18.125,131.392,21.423)
C4: (18.756,131.367,22.654)
P: (18.712,124.785,23.286)
C4': (20.261,127.798,25.292)
C2': (18.122,128.794,25.283)
C2: (19.342,133.484,22.497)
N1: (18.771,133.662,21.300)
N3: (19.390,132.390,23.254)
N6: (17.560,132.795,19.534)
N7: (17.585,130.147,21.124)
N9: (18.591,130.091,23.134)
O5': (19.041,126.201,23.943)
O3': (19.537,129.127,27.188)
Image (generated by PyMOL):