ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51081:52577

Extra

PDB:
ATOM 1 O3' A A1080 138.848 -4.260 260.143 1.00 36.08 O
ATOM 2 P G A1081 137.738 -5.035 261.045 1.00 37.32 P
ATOM 3 OP1 G A1081 137.522 -4.207 262.286 1.00 37.33 O
ATOM 4 OP2 G A1081 138.156 -6.475 261.169 1.00 37.40 O
ATOM 5 O5' G A1081 136.449 -4.980 260.117 1.00 37.37 O
ATOM 6 C5' G A1081 136.020 -3.777 259.558 1.00 37.30 C
ATOM 7 C4' G A1081 135.847 -3.905 258.104 1.00 37.28 C
ATOM 8 O4' G A1081 135.059 -2.780 257.677 1.00 37.26 O
ATOM 9 C3' G A1081 137.136 -3.849 257.306 1.00 37.16 C
ATOM 10 O3' G A1081 136.964 -4.518 256.062 1.00 37.20 O
ATOM 11 C2' G A1081 137.265 -2.358 257.055 1.00 37.05 C
ATOM 12 O2' G A1081 138.088 -2.004 255.965 1.00 36.96 O
ATOM 13 C1' G A1081 135.807 -1.977 256.813 1.00 37.13 C
ATOM 14 N9 G A1081 135.491 -0.570 257.097 1.00 37.09 N
ATOM 15 C8 G A1081 135.926 0.225 258.096 1.00 37.04 C
ATOM 16 N7 G A1081 135.462 1.424 258.005 1.00 37.02 N
ATOM 17 C5 G A1081 134.690 1.448 256.890 1.00 37.06 C
ATOM 18 C6 G A1081 133.944 2.496 256.324 1.00 37.07 C
ATOM 19 O6 G A1081 133.809 3.692 256.700 1.00 37.05 O
ATOM 20 N1 G A1081 133.310 2.059 255.197 1.00 37.12 N
ATOM 21 C2 G A1081 133.383 0.794 254.715 1.00 37.16 C
ATOM 22 N2 G A1081 132.700 0.554 253.611 1.00 37.22 N
ATOM 23 N3 G A1081 134.059 -0.198 255.215 1.00 37.15 N
ATOM 24 C4 G A1081 134.686 0.226 256.326 1.00 37.10 C
ATOM 25 P C A1082 137.203 -6.101 255.939 1.00 34.03 P
ATOM 26 OP1 C A1082 136.965 -6.490 254.544 1.00 34.06 O
ATOM 27 OP2 C A1082 136.409 -6.748 256.980 1.00 34.15 O
ATOM 28 O5' C A1082 138.729 -6.257 256.251 1.00 33.95 O
TER

ATOM 1 O3' G B2576 141.442 9.857 252.457 1.00 38.06 O
ATOM 2 P G B2577 141.620 8.952 253.749 1.00 40.75 P
ATOM 3 OP1 G B2577 141.176 9.714 254.908 1.00 40.78 O
ATOM 4 OP2 G B2577 142.968 8.435 253.724 1.00 40.69 O
ATOM 5 O5' G B2577 140.626 7.772 253.479 1.00 40.81 O
ATOM 6 C5' G B2577 139.242 7.897 253.723 1.00 40.89 C
ATOM 7 C4' G B2577 138.645 6.557 253.934 1.00 40.94 C
ATOM 8 O4' G B2577 138.855 5.758 252.763 1.00 40.94 O
ATOM 9 C3' G B2577 139.287 5.756 255.038 1.00 40.93 C
ATOM 10 O3' G B2577 138.807 6.137 256.293 1.00 40.97 O
ATOM 11 C2' G B2577 138.944 4.331 254.653 1.00 40.97 C
ATOM 12 O2' G B2577 137.597 4.043 254.983 1.00 41.07 O
ATOM 13 C1' G B2577 139.053 4.408 253.142 1.00 40.96 C
ATOM 14 N9 G B2577 140.363 3.947 252.645 1.00 40.90 N
ATOM 15 C8 G B2577 141.368 4.669 252.129 1.00 40.83 C
ATOM 16 N7 G B2577 142.372 3.931 251.737 1.00 40.80 N
ATOM 17 C5 G B2577 142.010 2.645 251.965 1.00 40.86 C
ATOM 18 C6 G B2577 142.709 1.430 251.769 1.00 40.88 C
ATOM 19 O6 G B2577 143.823 1.303 251.291 1.00 40.84 O
ATOM 20 N1 G B2577 142.001 0.306 252.171 1.00 40.95 N
ATOM 21 C2 G B2577 140.733 0.447 252.691 1.00 41.01 C
ATOM 22 N2 G B2577 140.051 -0.608 253.053 1.00 41.10 N
ATOM 23 N3 G B2577 140.093 1.565 252.904 1.00 40.99 N
ATOM 24 C4 G B2577 140.774 2.648 252.520 1.00 40.92 C
ATOM 25 P C B2578 139.570 5.764 257.614 1.00 34.74 P
ATOM 26 OP1 C B2578 138.823 6.357 258.714 1.00 34.80 O
ATOM 27 OP2 C B2578 140.983 6.143 257.426 1.00 34.65 O
ATOM 28 O5' C B2578 139.453 4.189 257.662 1.00 34.78 O
TER

Atoms:
OP1: (137.522,-4.207,262.286)
OP2: (138.156,-6.475,261.169)
C3': (137.136,-3.849,257.306)
C1': (135.807,-1.977,256.813)
C5': (136.020,-3.777,259.558)
O6: (133.809,3.692,256.700)
O4': (135.059,-2.780,257.677)
C8: (135.926,0.225,258.096)
C2: (133.383,0.794,254.715)
C6: (133.944,2.496,256.324)
C5: (134.690,1.448,256.890)
C4: (134.686,0.226,256.326)
P: (137.738,-5.035,261.045)
C4': (135.847,-3.905,258.104)
C2': (137.265,-2.358,257.055)
O2': (138.088,-2.004,255.965)
N1: (133.310,2.059,255.197)
N2: (132.700,0.554,253.611)
N3: (134.059,-0.198,255.215)
N7: (135.462,1.424,258.005)
N9: (135.491,-0.570,257.097)
O5': (136.449,-4.980,260.117)
O3': (136.964,-4.518,256.062)
OP1: (141.176,9.714,254.908)
OP2: (142.968,8.435,253.724)
C3': (139.287,5.756,255.038)
C1': (139.053,4.408,253.142)
C5': (139.242,7.897,253.723)
O6: (143.823,1.303,251.291)
O4': (138.855,5.758,252.763)
C8: (141.368,4.669,252.129)
C2: (140.733,0.447,252.691)
C6: (142.709,1.430,251.769)
C5: (142.010,2.645,251.965)
C4: (140.774,2.648,252.520)
P: (141.620,8.952,253.749)
C4': (138.645,6.557,253.934)
C2': (138.944,4.331,254.653)
O2': (137.597,4.043,254.983)
N1: (142.001,0.306,252.171)
N2: (140.051,-0.608,253.053)
N3: (140.093,1.565,252.904)
N7: (142.372,3.931,251.737)
N9: (140.363,3.947,252.645)
O5': (140.626,7.772,253.479)
O3': (138.807,6.137,256.293)
Image (generated by PyMOL):
PyMOL image
show in jmol