Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A9:A12
Extra
PDB:
ATOM 1 O3' U A 8 177.138 106.455 -7.509 1.00 29.25 O
ATOM 2 P U A 9 178.558 106.891 -6.851 1.00 28.17 P
ATOM 3 OP1 U A 9 179.600 106.183 -7.643 1.00 30.32 O
ATOM 4 OP2 U A 9 178.519 106.668 -5.375 1.00 28.23 O
ATOM 5 O5' U A 9 178.711 108.427 -7.229 1.00 25.27 O
ATOM 6 C5' U A 9 179.043 108.799 -8.567 1.00 24.50 C
ATOM 7 C4' U A 9 179.048 110.297 -8.723 1.00 26.68 C
ATOM 8 O4' U A 9 177.702 110.805 -8.565 1.00 28.89 O
ATOM 9 C3' U A 9 179.887 111.107 -7.745 1.00 27.52 C
ATOM 10 O3' U A 9 181.248 111.173 -8.140 1.00 28.67 O
ATOM 11 C2' U A 9 179.217 112.477 -7.805 1.00 27.61 C
ATOM 12 O2' U A 9 179.587 113.228 -8.937 1.00 26.58 O
ATOM 13 C1' U A 9 177.747 112.096 -7.976 1.00 28.66 C
ATOM 14 N1 U A 9 177.050 112.062 -6.679 1.00 28.21 N
ATOM 15 C2 U A 9 176.608 113.262 -6.165 1.00 26.83 C
ATOM 16 O2 U A 9 176.717 114.317 -6.767 1.00 26.55 O
ATOM 17 N3 U A 9 176.029 113.183 -4.924 1.00 26.95 N
ATOM 18 C4 U A 9 175.841 112.049 -4.168 1.00 28.50 C
ATOM 19 O4 U A 9 175.422 112.155 -3.019 1.00 30.99 O
ATOM 20 C5 U A 9 176.288 110.839 -4.784 1.00 29.81 C
ATOM 21 C6 U A 9 176.865 110.886 -5.988 1.00 28.68 C
ATOM 22 P G A 10 182.410 110.966 -7.042 1.00 30.99 P
ATOM 23 OP1 G A 10 183.687 110.899 -7.799 1.00 33.66 O
ATOM 24 OP2 G A 10 182.052 109.860 -6.115 1.00 29.57 O
ATOM 25 O5' G A 10 182.435 112.351 -6.249 1.00 31.51 O
TER
ATOM 1 O3' A B 11 175.831 117.582 -3.624 1.00 28.80 O
ATOM 2 P U B 12 174.406 116.931 -4.013 1.00 29.70 P
ATOM 3 OP1 U B 12 173.464 117.511 -3.003 1.00 30.70 O
ATOM 4 OP2 U B 12 174.510 115.443 -4.133 1.00 28.82 O
ATOM 5 O5' U B 12 174.079 117.556 -5.445 1.00 24.26 O
ATOM 6 C5' U B 12 173.898 118.958 -5.569 1.00 24.13 C
ATOM 7 C4' U B 12 173.303 119.311 -6.906 1.00 24.40 C
ATOM 8 O4' U B 12 174.271 119.142 -7.967 1.00 24.15 O
ATOM 9 C3' U B 12 172.085 118.544 -7.377 1.00 24.59 C
ATOM 10 O3' U B 12 170.928 119.050 -6.746 1.00 26.75 O
ATOM 11 C2' U B 12 172.096 118.840 -8.873 1.00 23.46 C
ATOM 12 O2' U B 12 171.564 120.113 -9.199 1.00 23.28 O
ATOM 13 C1' U B 12 173.593 118.883 -9.173 1.00 22.12 C
ATOM 14 N1 U B 12 174.101 117.632 -9.760 1.00 20.87 N
ATOM 15 C2 U B 12 173.898 117.450 -11.123 1.00 19.84 C
ATOM 16 O2 U B 12 173.328 118.276 -11.830 1.00 18.50 O
ATOM 17 N3 U B 12 174.379 116.271 -11.623 1.00 17.63 N
ATOM 18 C4 U B 12 175.032 115.280 -10.926 1.00 17.99 C
ATOM 19 O4 U B 12 175.466 114.315 -11.540 1.00 19.34 O
ATOM 20 C5 U B 12 175.203 115.531 -9.527 1.00 16.25 C
ATOM 21 C6 U B 12 174.745 116.671 -9.004 1.00 20.17 C
ATOM 22 P C B 13 169.680 118.078 -6.449 1.00 27.00 P
ATOM 23 OP1 C B 13 168.785 118.935 -5.636 1.00 30.25 O
ATOM 24 OP2 C B 13 170.109 116.765 -5.892 1.00 23.94 O
ATOM 25 O5' C B 13 168.985 117.932 -7.852 1.00 23.01 O
TER
ATOM 2 P U A 9 178.558 106.891 -6.851 1.00 28.17 P
ATOM 3 OP1 U A 9 179.600 106.183 -7.643 1.00 30.32 O
ATOM 4 OP2 U A 9 178.519 106.668 -5.375 1.00 28.23 O
ATOM 5 O5' U A 9 178.711 108.427 -7.229 1.00 25.27 O
ATOM 6 C5' U A 9 179.043 108.799 -8.567 1.00 24.50 C
ATOM 7 C4' U A 9 179.048 110.297 -8.723 1.00 26.68 C
ATOM 8 O4' U A 9 177.702 110.805 -8.565 1.00 28.89 O
ATOM 9 C3' U A 9 179.887 111.107 -7.745 1.00 27.52 C
ATOM 10 O3' U A 9 181.248 111.173 -8.140 1.00 28.67 O
ATOM 11 C2' U A 9 179.217 112.477 -7.805 1.00 27.61 C
ATOM 12 O2' U A 9 179.587 113.228 -8.937 1.00 26.58 O
ATOM 13 C1' U A 9 177.747 112.096 -7.976 1.00 28.66 C
ATOM 14 N1 U A 9 177.050 112.062 -6.679 1.00 28.21 N
ATOM 15 C2 U A 9 176.608 113.262 -6.165 1.00 26.83 C
ATOM 16 O2 U A 9 176.717 114.317 -6.767 1.00 26.55 O
ATOM 17 N3 U A 9 176.029 113.183 -4.924 1.00 26.95 N
ATOM 18 C4 U A 9 175.841 112.049 -4.168 1.00 28.50 C
ATOM 19 O4 U A 9 175.422 112.155 -3.019 1.00 30.99 O
ATOM 20 C5 U A 9 176.288 110.839 -4.784 1.00 29.81 C
ATOM 21 C6 U A 9 176.865 110.886 -5.988 1.00 28.68 C
ATOM 22 P G A 10 182.410 110.966 -7.042 1.00 30.99 P
ATOM 23 OP1 G A 10 183.687 110.899 -7.799 1.00 33.66 O
ATOM 24 OP2 G A 10 182.052 109.860 -6.115 1.00 29.57 O
ATOM 25 O5' G A 10 182.435 112.351 -6.249 1.00 31.51 O
TER
ATOM 1 O3' A B 11 175.831 117.582 -3.624 1.00 28.80 O
ATOM 2 P U B 12 174.406 116.931 -4.013 1.00 29.70 P
ATOM 3 OP1 U B 12 173.464 117.511 -3.003 1.00 30.70 O
ATOM 4 OP2 U B 12 174.510 115.443 -4.133 1.00 28.82 O
ATOM 5 O5' U B 12 174.079 117.556 -5.445 1.00 24.26 O
ATOM 6 C5' U B 12 173.898 118.958 -5.569 1.00 24.13 C
ATOM 7 C4' U B 12 173.303 119.311 -6.906 1.00 24.40 C
ATOM 8 O4' U B 12 174.271 119.142 -7.967 1.00 24.15 O
ATOM 9 C3' U B 12 172.085 118.544 -7.377 1.00 24.59 C
ATOM 10 O3' U B 12 170.928 119.050 -6.746 1.00 26.75 O
ATOM 11 C2' U B 12 172.096 118.840 -8.873 1.00 23.46 C
ATOM 12 O2' U B 12 171.564 120.113 -9.199 1.00 23.28 O
ATOM 13 C1' U B 12 173.593 118.883 -9.173 1.00 22.12 C
ATOM 14 N1 U B 12 174.101 117.632 -9.760 1.00 20.87 N
ATOM 15 C2 U B 12 173.898 117.450 -11.123 1.00 19.84 C
ATOM 16 O2 U B 12 173.328 118.276 -11.830 1.00 18.50 O
ATOM 17 N3 U B 12 174.379 116.271 -11.623 1.00 17.63 N
ATOM 18 C4 U B 12 175.032 115.280 -10.926 1.00 17.99 C
ATOM 19 O4 U B 12 175.466 114.315 -11.540 1.00 19.34 O
ATOM 20 C5 U B 12 175.203 115.531 -9.527 1.00 16.25 C
ATOM 21 C6 U B 12 174.745 116.671 -9.004 1.00 20.17 C
ATOM 22 P C B 13 169.680 118.078 -6.449 1.00 27.00 P
ATOM 23 OP1 C B 13 168.785 118.935 -5.636 1.00 30.25 O
ATOM 24 OP2 C B 13 170.109 116.765 -5.892 1.00 23.94 O
ATOM 25 O5' C B 13 168.985 117.932 -7.852 1.00 23.01 O
TER
Atoms:
C4: (175.841,112.049,-4.168)
N3: (176.029,113.183,-4.924)
OP1: (179.600,106.183,-7.643)
OP2: (178.519,106.668,-5.375)
C2: (176.608,113.262,-6.165)
C1': (177.747,112.096,-7.976)
C3': (179.887,111.107,-7.745)
O5': (178.711,108.427,-7.229)
O4': (177.702,110.805,-8.565)
C5': (179.043,108.799,-8.567)
P: (178.558,106.891,-6.851)
C4': (179.048,110.297,-8.723)
C2': (179.217,112.477,-7.805)
O2': (179.587,113.228,-8.937)
N1: (177.050,112.062,-6.679)
O4: (175.422,112.155,-3.019)
O2: (176.717,114.317,-6.767)
C6: (176.865,110.886,-5.988)
C5: (176.288,110.839,-4.784)
O3': (181.248,111.173,-8.140)
N3: (176.029,113.183,-4.924)
OP1: (179.600,106.183,-7.643)
OP2: (178.519,106.668,-5.375)
C2: (176.608,113.262,-6.165)
C1': (177.747,112.096,-7.976)
C3': (179.887,111.107,-7.745)
O5': (178.711,108.427,-7.229)
O4': (177.702,110.805,-8.565)
C5': (179.043,108.799,-8.567)
P: (178.558,106.891,-6.851)
C4': (179.048,110.297,-8.723)
C2': (179.217,112.477,-7.805)
O2': (179.587,113.228,-8.937)
N1: (177.050,112.062,-6.679)
O4: (175.422,112.155,-3.019)
O2: (176.717,114.317,-6.767)
C6: (176.865,110.886,-5.988)
C5: (176.288,110.839,-4.784)
O3': (181.248,111.173,-8.140)
C4: (175.032,115.280,-10.926)
N3: (174.379,116.271,-11.623)
OP1: (173.464,117.511,-3.003)
OP2: (174.510,115.443,-4.133)
C2: (173.898,117.450,-11.123)
C1': (173.593,118.883,-9.173)
C3': (172.085,118.544,-7.377)
O5': (174.079,117.556,-5.445)
O4': (174.271,119.142,-7.967)
C5': (173.898,118.958,-5.569)
P: (174.406,116.931,-4.013)
C4': (173.303,119.311,-6.906)
C2': (172.096,118.840,-8.873)
O2': (171.564,120.113,-9.199)
N1: (174.101,117.632,-9.760)
O4: (175.466,114.315,-11.540)
O2: (173.328,118.276,-11.830)
C6: (174.745,116.671,-9.004)
C5: (175.203,115.531,-9.527)
O3': (170.928,119.050,-6.746)
N3: (174.379,116.271,-11.623)
OP1: (173.464,117.511,-3.003)
OP2: (174.510,115.443,-4.133)
C2: (173.898,117.450,-11.123)
C1': (173.593,118.883,-9.173)
C3': (172.085,118.544,-7.377)
O5': (174.079,117.556,-5.445)
O4': (174.271,119.142,-7.967)
C5': (173.898,118.958,-5.569)
P: (174.406,116.931,-4.013)
C4': (173.303,119.311,-6.906)
C2': (172.096,118.840,-8.873)
O2': (171.564,120.113,-9.199)
N1: (174.101,117.632,-9.760)
O4: (175.466,114.315,-11.540)
O2: (173.328,118.276,-11.830)
C6: (174.745,116.671,-9.004)
C5: (175.203,115.531,-9.527)
O3': (170.928,119.050,-6.746)
Image (generated by PyMOL):