ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2YIE:Z18:X38

Extra

PDB:
ATOM 1 O3' U A 17 26.557 -50.463 -76.223 1.00 69.91 O
ATOM 2 P U A 18 26.376 -50.096 -77.774 1.00 60.69 P
ATOM 3 OP1 U A 18 26.945 -48.738 -77.967 1.00 82.27 O
ATOM 4 OP2 U A 18 26.938 -51.224 -78.564 1.00 48.90 O
ATOM 5 O5' U A 18 24.792 -50.056 -77.946 1.00 63.36 O
ATOM 6 C5' U A 18 24.042 -51.263 -77.978 1.00 50.82 C
ATOM 7 C4' U A 18 22.874 -51.190 -78.934 1.00 54.49 C
ATOM 8 O4' U A 18 21.754 -50.520 -78.288 1.00 63.67 O
ATOM 9 C3' U A 18 23.130 -50.448 -80.247 1.00 59.56 C
ATOM 10 O3' U A 18 22.471 -51.135 -81.311 1.00 54.41 O
ATOM 11 C2' U A 18 22.446 -49.099 -80.017 1.00 69.82 C
ATOM 12 O2' U A 18 22.017 -48.451 -81.196 1.00 74.31 O
ATOM 13 C1' U A 18 21.269 -49.495 -79.129 1.00 69.96 C
ATOM 14 N1 U A 18 20.752 -48.400 -78.278 1.00 87.47 N
ATOM 15 C2 U A 18 19.461 -47.962 -78.509 1.00 93.29 C
ATOM 16 O2 U A 18 18.743 -48.436 -79.373 1.00 94.03 O
ATOM 17 N3 U A 18 19.031 -46.946 -77.694 1.00101.42 N
ATOM 18 C4 U A 18 19.746 -46.335 -76.692 1.00107.34 C
ATOM 19 O4 U A 18 19.221 -45.432 -76.044 1.00118.06 O
ATOM 20 C5 U A 18 21.070 -46.841 -76.513 1.00102.08 C
ATOM 21 C6 U A 18 21.516 -47.832 -77.292 1.00 92.14 C
ATOM 22 P C A 19 23.287 -51.574 -82.626 1.00 61.61 P
ATOM 23 OP1 C A 19 24.615 -52.073 -82.180 1.00 45.28 O
ATOM 24 OP2 C A 19 22.406 -52.487 -83.399 1.00 52.65 O
ATOM 25 O5' C A 19 23.461 -50.199 -83.407 1.00 74.29 O
TER

ATOM 1 O3' A B 37 17.810 -44.373 -80.325 1.00 70.10 O
ATOM 2 P U B 38 16.544 -45.337 -80.131 1.00 71.65 P
ATOM 3 OP1 U B 38 15.324 -44.493 -80.245 1.00 76.96 O
ATOM 4 OP2 U B 38 16.766 -46.109 -78.883 1.00 79.74 O
ATOM 5 O5' U B 38 16.660 -46.299 -81.392 1.00 67.93 O
ATOM 6 C5' U B 38 15.887 -47.487 -81.474 1.00 67.07 C
ATOM 7 C4' U B 38 16.377 -48.398 -82.571 1.00 64.23 C
ATOM 8 O4' U B 38 16.871 -47.597 -83.677 1.00 65.70 O
ATOM 9 C3' U B 38 17.514 -49.341 -82.183 1.00 60.89 C
ATOM 10 O3' U B 38 17.328 -50.585 -82.840 1.00 57.45 O
ATOM 11 C2' U B 38 18.748 -48.654 -82.753 1.00 62.17 C
ATOM 12 O2' U B 38 19.819 -49.530 -83.053 1.00 61.67 O
ATOM 13 C1' U B 38 18.181 -48.008 -84.011 1.00 63.98 C
ATOM 14 N1 U B 38 18.929 -46.829 -84.469 1.00 73.87 N
ATOM 15 C2 U B 38 19.763 -47.016 -85.540 1.00 75.73 C
ATOM 16 O2 U B 38 19.873 -48.104 -86.078 1.00 78.66 O
ATOM 17 N3 U B 38 20.450 -45.899 -85.944 1.00 76.99 N
ATOM 18 C4 U B 38 20.375 -44.643 -85.386 1.00 77.76 C
ATOM 19 O4 U B 38 21.047 -43.721 -85.851 1.00 81.13 O
ATOM 20 C5 U B 38 19.484 -44.539 -84.275 1.00 78.79 C
ATOM 21 C6 U B 38 18.804 -45.609 -83.859 1.00 76.39 C
ATOM 22 P A B 39 16.607 -51.785 -82.069 1.00 58.17 P
ATOM 23 OP1 A B 39 16.387 -52.874 -83.059 1.00 61.38 O
ATOM 24 OP2 A B 39 15.432 -51.210 -81.359 1.00 63.99 O
ATOM 25 O5' A B 39 17.712 -52.223 -81.017 1.00 57.35 O
TER

Atoms:
C4: (19.746,-46.335,-76.692)
N3: (19.031,-46.946,-77.694)
OP1: (26.945,-48.738,-77.967)
OP2: (26.938,-51.224,-78.564)
C2: (19.461,-47.962,-78.509)
C1': (21.269,-49.495,-79.129)
C3': (23.130,-50.448,-80.247)
O5': (24.792,-50.056,-77.946)
O4': (21.754,-50.520,-78.288)
C5': (24.042,-51.263,-77.978)
P: (26.376,-50.096,-77.774)
C4': (22.874,-51.190,-78.934)
C2': (22.446,-49.099,-80.017)
O2': (22.017,-48.451,-81.196)
N1: (20.752,-48.400,-78.278)
O4: (19.221,-45.432,-76.044)
O2: (18.743,-48.436,-79.373)
C6: (21.516,-47.832,-77.292)
C5: (21.070,-46.841,-76.513)
O3': (22.471,-51.135,-81.311)
C4: (20.375,-44.643,-85.386)
N3: (20.450,-45.899,-85.944)
OP1: (15.324,-44.493,-80.245)
OP2: (16.766,-46.109,-78.883)
C2: (19.763,-47.016,-85.540)
C1': (18.181,-48.008,-84.011)
C3': (17.514,-49.341,-82.183)
O5': (16.660,-46.299,-81.392)
O4': (16.871,-47.597,-83.677)
C5': (15.887,-47.487,-81.474)
P: (16.544,-45.337,-80.131)
C4': (16.377,-48.398,-82.571)
C2': (18.748,-48.654,-82.753)
O2': (19.819,-49.530,-83.053)
N1: (18.929,-46.829,-84.469)
O4: (21.047,-43.721,-85.851)
O2: (19.873,-48.104,-86.078)
C6: (18.804,-45.609,-83.859)
C5: (19.484,-44.539,-84.275)
O3': (17.328,-50.585,-82.840)
Image (generated by PyMOL):
PyMOL image
show in jmol