Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:01235:01238
Extra
PDB:
ATOM 1 O3' C A1234 2.407 82.679 63.363 1.00 68.86 O
ATOM 2 P U A1235 3.272 82.446 62.044 1.00 73.97 P
ATOM 3 OP1 U A1235 2.327 82.031 60.984 1.00 76.05 O
ATOM 4 OP2 U A1235 4.420 81.572 62.391 1.00 73.01 O
ATOM 5 O5' U A1235 3.812 83.904 61.697 1.00 75.54 O
ATOM 6 C5' U A1235 2.894 84.965 61.376 1.00 76.82 C
ATOM 7 C4' U A1235 3.627 86.279 61.215 1.00 77.45 C
ATOM 8 O4' U A1235 4.146 86.737 62.490 1.00 78.13 O
ATOM 9 C3' U A1235 4.853 86.293 60.321 1.00 76.27 C
ATOM 10 O3' U A1235 4.510 86.350 58.954 1.00 75.94 O
ATOM 11 C2' U A1235 5.510 87.590 60.754 1.00 77.91 C
ATOM 12 O2' U A1235 4.810 88.708 60.253 1.00 79.21 O
ATOM 13 C1' U A1235 5.299 87.534 62.266 1.00 78.15 C
ATOM 14 N1 U A1235 6.453 86.910 62.929 1.00 78.58 N
ATOM 15 C2 U A1235 7.419 87.751 63.444 1.00 78.77 C
ATOM 16 O2 U A1235 7.328 88.969 63.407 1.00 78.44 O
ATOM 17 N3 U A1235 8.499 87.116 64.007 1.00 78.79 N
ATOM 18 C4 U A1235 8.703 85.756 64.112 1.00 78.71 C
ATOM 19 O4 U A1235 9.754 85.339 64.604 1.00 78.36 O
ATOM 20 C5 U A1235 7.648 84.953 63.576 1.00 78.57 C
ATOM 21 C6 U A1235 6.584 85.543 63.017 1.00 78.61 C
ATOM 22 P C A1236 5.396 85.560 57.888 1.00 75.80 P
ATOM 23 OP1 C A1236 4.601 85.385 56.655 1.00 76.37 O
ATOM 24 OP2 C A1236 5.956 84.382 58.567 1.00 75.16 O
ATOM 25 O5' C A1236 6.584 86.554 57.543 1.00 78.60 O
TER
ATOM 1 O3' A B1237 12.029 90.515 63.312 1.00100.45 O
ATOM 2 P U B1238 11.668 89.422 64.432 1.00104.52 P
ATOM 3 OP1 U B1238 12.714 88.371 64.382 1.00104.66 O
ATOM 4 OP2 U B1238 10.248 89.046 64.267 1.00104.69 O
ATOM 5 O5' U B1238 11.814 90.220 65.805 1.00109.39 O
ATOM 6 C5' U B1238 11.554 91.643 65.862 1.00115.88 C
ATOM 7 C4' U B1238 12.859 92.415 65.922 1.00120.19 C
ATOM 8 O4' U B1238 13.926 91.593 65.384 1.00122.70 O
ATOM 9 C3' U B1238 12.868 93.708 65.113 1.00121.35 C
ATOM 10 O3' U B1238 12.446 94.824 65.911 1.00121.01 O
ATOM 11 C2' U B1238 14.333 93.840 64.685 1.00122.52 C
ATOM 12 O2' U B1238 15.150 94.459 65.660 1.00122.50 O
ATOM 13 C1' U B1238 14.766 92.371 64.557 1.00123.22 C
ATOM 14 N1 U B1238 14.800 91.726 63.232 1.00123.97 N
ATOM 15 C2 U B1238 14.423 92.437 62.103 1.00124.08 C
ATOM 16 O2 U B1238 14.065 93.602 62.132 1.00124.68 O
ATOM 17 N3 U B1238 14.486 91.722 60.930 1.00124.34 N
ATOM 18 C4 U B1238 14.883 90.405 60.772 1.00124.26 C
ATOM 19 O4 U B1238 14.904 89.904 59.646 1.00124.17 O
ATOM 20 C5 U B1238 15.257 89.749 61.980 1.00124.20 C
ATOM 21 C6 U B1238 15.205 90.412 63.136 1.00124.19 C
ATOM 22 P A B1239 10.876 95.121 66.134 1.00120.74 P
ATOM 23 OP1 A B1239 10.786 96.262 67.078 1.00120.74 O
ATOM 24 OP2 A B1239 10.170 93.856 66.451 1.00121.01 O
ATOM 25 O5' A B1239 10.363 95.638 64.721 1.00119.71 O
TER
ATOM 2 P U A1235 3.272 82.446 62.044 1.00 73.97 P
ATOM 3 OP1 U A1235 2.327 82.031 60.984 1.00 76.05 O
ATOM 4 OP2 U A1235 4.420 81.572 62.391 1.00 73.01 O
ATOM 5 O5' U A1235 3.812 83.904 61.697 1.00 75.54 O
ATOM 6 C5' U A1235 2.894 84.965 61.376 1.00 76.82 C
ATOM 7 C4' U A1235 3.627 86.279 61.215 1.00 77.45 C
ATOM 8 O4' U A1235 4.146 86.737 62.490 1.00 78.13 O
ATOM 9 C3' U A1235 4.853 86.293 60.321 1.00 76.27 C
ATOM 10 O3' U A1235 4.510 86.350 58.954 1.00 75.94 O
ATOM 11 C2' U A1235 5.510 87.590 60.754 1.00 77.91 C
ATOM 12 O2' U A1235 4.810 88.708 60.253 1.00 79.21 O
ATOM 13 C1' U A1235 5.299 87.534 62.266 1.00 78.15 C
ATOM 14 N1 U A1235 6.453 86.910 62.929 1.00 78.58 N
ATOM 15 C2 U A1235 7.419 87.751 63.444 1.00 78.77 C
ATOM 16 O2 U A1235 7.328 88.969 63.407 1.00 78.44 O
ATOM 17 N3 U A1235 8.499 87.116 64.007 1.00 78.79 N
ATOM 18 C4 U A1235 8.703 85.756 64.112 1.00 78.71 C
ATOM 19 O4 U A1235 9.754 85.339 64.604 1.00 78.36 O
ATOM 20 C5 U A1235 7.648 84.953 63.576 1.00 78.57 C
ATOM 21 C6 U A1235 6.584 85.543 63.017 1.00 78.61 C
ATOM 22 P C A1236 5.396 85.560 57.888 1.00 75.80 P
ATOM 23 OP1 C A1236 4.601 85.385 56.655 1.00 76.37 O
ATOM 24 OP2 C A1236 5.956 84.382 58.567 1.00 75.16 O
ATOM 25 O5' C A1236 6.584 86.554 57.543 1.00 78.60 O
TER
ATOM 1 O3' A B1237 12.029 90.515 63.312 1.00100.45 O
ATOM 2 P U B1238 11.668 89.422 64.432 1.00104.52 P
ATOM 3 OP1 U B1238 12.714 88.371 64.382 1.00104.66 O
ATOM 4 OP2 U B1238 10.248 89.046 64.267 1.00104.69 O
ATOM 5 O5' U B1238 11.814 90.220 65.805 1.00109.39 O
ATOM 6 C5' U B1238 11.554 91.643 65.862 1.00115.88 C
ATOM 7 C4' U B1238 12.859 92.415 65.922 1.00120.19 C
ATOM 8 O4' U B1238 13.926 91.593 65.384 1.00122.70 O
ATOM 9 C3' U B1238 12.868 93.708 65.113 1.00121.35 C
ATOM 10 O3' U B1238 12.446 94.824 65.911 1.00121.01 O
ATOM 11 C2' U B1238 14.333 93.840 64.685 1.00122.52 C
ATOM 12 O2' U B1238 15.150 94.459 65.660 1.00122.50 O
ATOM 13 C1' U B1238 14.766 92.371 64.557 1.00123.22 C
ATOM 14 N1 U B1238 14.800 91.726 63.232 1.00123.97 N
ATOM 15 C2 U B1238 14.423 92.437 62.103 1.00124.08 C
ATOM 16 O2 U B1238 14.065 93.602 62.132 1.00124.68 O
ATOM 17 N3 U B1238 14.486 91.722 60.930 1.00124.34 N
ATOM 18 C4 U B1238 14.883 90.405 60.772 1.00124.26 C
ATOM 19 O4 U B1238 14.904 89.904 59.646 1.00124.17 O
ATOM 20 C5 U B1238 15.257 89.749 61.980 1.00124.20 C
ATOM 21 C6 U B1238 15.205 90.412 63.136 1.00124.19 C
ATOM 22 P A B1239 10.876 95.121 66.134 1.00120.74 P
ATOM 23 OP1 A B1239 10.786 96.262 67.078 1.00120.74 O
ATOM 24 OP2 A B1239 10.170 93.856 66.451 1.00121.01 O
ATOM 25 O5' A B1239 10.363 95.638 64.721 1.00119.71 O
TER
Atoms:
C4: (8.703,85.756,64.112)
N3: (8.499,87.116,64.007)
OP1: (2.327,82.031,60.984)
OP2: (4.420,81.572,62.391)
C2: (7.419,87.751,63.444)
C1': (5.299,87.534,62.266)
C3': (4.853,86.293,60.321)
O5': (3.812,83.904,61.697)
O4': (4.146,86.737,62.490)
C5': (2.894,84.965,61.376)
P: (3.272,82.446,62.044)
C4': (3.627,86.279,61.215)
C2': (5.510,87.590,60.754)
O2': (4.810,88.708,60.253)
N1: (6.453,86.910,62.929)
O4: (9.754,85.339,64.604)
O2: (7.328,88.969,63.407)
C6: (6.584,85.543,63.017)
C5: (7.648,84.953,63.576)
O3': (4.510,86.350,58.954)
N3: (8.499,87.116,64.007)
OP1: (2.327,82.031,60.984)
OP2: (4.420,81.572,62.391)
C2: (7.419,87.751,63.444)
C1': (5.299,87.534,62.266)
C3': (4.853,86.293,60.321)
O5': (3.812,83.904,61.697)
O4': (4.146,86.737,62.490)
C5': (2.894,84.965,61.376)
P: (3.272,82.446,62.044)
C4': (3.627,86.279,61.215)
C2': (5.510,87.590,60.754)
O2': (4.810,88.708,60.253)
N1: (6.453,86.910,62.929)
O4: (9.754,85.339,64.604)
O2: (7.328,88.969,63.407)
C6: (6.584,85.543,63.017)
C5: (7.648,84.953,63.576)
O3': (4.510,86.350,58.954)
C4: (14.883,90.405,60.772)
N3: (14.486,91.722,60.930)
OP1: (12.714,88.371,64.382)
OP2: (10.248,89.046,64.267)
C2: (14.423,92.437,62.103)
C1': (14.766,92.371,64.557)
C3': (12.868,93.708,65.113)
O5': (11.814,90.220,65.805)
O4': (13.926,91.593,65.384)
C5': (11.554,91.643,65.862)
P: (11.668,89.422,64.432)
C4': (12.859,92.415,65.922)
C2': (14.333,93.840,64.685)
O2': (15.150,94.459,65.660)
N1: (14.800,91.726,63.232)
O4: (14.904,89.904,59.646)
O2: (14.065,93.602,62.132)
C6: (15.205,90.412,63.136)
C5: (15.257,89.749,61.980)
O3': (12.446,94.824,65.911)
N3: (14.486,91.722,60.930)
OP1: (12.714,88.371,64.382)
OP2: (10.248,89.046,64.267)
C2: (14.423,92.437,62.103)
C1': (14.766,92.371,64.557)
C3': (12.868,93.708,65.113)
O5': (11.814,90.220,65.805)
O4': (13.926,91.593,65.384)
C5': (11.554,91.643,65.862)
P: (11.668,89.422,64.432)
C4': (12.859,92.415,65.922)
C2': (14.333,93.840,64.685)
O2': (15.150,94.459,65.660)
N1: (14.800,91.726,63.232)
O4: (14.904,89.904,59.646)
O2: (14.065,93.602,62.132)
C6: (15.205,90.412,63.136)
C5: (15.257,89.749,61.980)
O3': (12.446,94.824,65.911)
Image (generated by PyMOL):