Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B55:B58
Extra
PDB:
ATOM 1 O3' G A 54 10.049 -38.706 -5.381 1.00 61.20 O
ATOM 2 P U A 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U A 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U A 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U A 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U A 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U A 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U A 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U A 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U A 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U A 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U A 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U A 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U A 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U A 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U A 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U A 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U A 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U A 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U A 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U A 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
ATOM 1 O3' A B 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 2 P U B 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U B 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U B 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U B 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U B 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U B 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U B 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U B 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U B 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U B 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U B 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U B 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U B 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U B 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U B 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U B 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U B 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U B 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U B 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
TER
ATOM 2 P U A 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U A 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U A 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U A 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U A 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U A 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U A 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U A 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U A 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U A 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U A 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U A 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U A 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U A 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U A 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U A 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U A 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U A 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U A 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U A 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
ATOM 1 O3' A B 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 2 P U B 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U B 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U B 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U B 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U B 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U B 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U B 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U B 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U B 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U B 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U B 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U B 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U B 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U B 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U B 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U B 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U B 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U B 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U B 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
TER
Atoms:
C4: (8.111,-33.345,-0.722)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
C4: (0.767,-35.270,-2.197)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
Image (generated by PyMOL):