Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A55:A58
Extra
PDB:
ATOM 1 O3' G A 54 13.538 -36.868 -0.579 1.00 38.66 O
ATOM 2 P U A 55 13.793 -35.376 -1.141 1.00 39.94 P
ATOM 3 OP1 U A 55 14.342 -35.525 -2.523 1.00 39.55 O
ATOM 4 OP2 U A 55 14.542 -34.570 -0.127 1.00 38.04 O
ATOM 5 O5' U A 55 12.331 -34.758 -1.247 1.00 38.38 O
ATOM 6 C5' U A 55 11.352 -35.348 -2.112 1.00 37.51 C
ATOM 7 C4' U A 55 10.032 -34.631 -1.970 1.00 37.42 C
ATOM 8 O4' U A 55 9.545 -34.780 -0.610 1.00 36.66 O
ATOM 9 C3' U A 55 10.054 -33.127 -2.192 1.00 37.48 C
ATOM 10 O3' U A 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 11 C2' U A 55 8.824 -32.660 -1.426 1.00 37.36 C
ATOM 12 O2' U A 55 7.646 -32.816 -2.195 1.00 38.69 O
ATOM 13 C1' U A 55 8.815 -33.624 -0.236 1.00 36.04 C
ATOM 14 N1 U A 55 9.433 -33.045 0.966 1.00 34.60 N
ATOM 15 C2 U A 55 8.619 -32.315 1.829 1.00 34.35 C
ATOM 16 O2 U A 55 7.425 -32.175 1.653 1.00 35.79 O
ATOM 17 N3 U A 55 9.259 -31.767 2.912 1.00 31.94 N
ATOM 18 C4 U A 55 10.592 -31.886 3.229 1.00 32.73 C
ATOM 19 O4 U A 55 11.012 -31.384 4.272 1.00 32.36 O
ATOM 20 C5 U A 55 11.360 -32.667 2.304 1.00 33.37 C
ATOM 21 C6 U A 55 10.770 -33.205 1.232 1.00 33.26 C
ATOM 22 P A A 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 23 OP1 A A 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 24 OP2 A A 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 25 O5' A A 56 9.895 -30.240 -3.594 1.00 37.43 O
TER
ATOM 1 O3' A B 57 6.088 -28.576 4.333 1.00 25.52 O
ATOM 2 P U B 58 6.550 -29.681 5.400 1.00 26.34 P
ATOM 3 OP1 U B 58 6.882 -28.960 6.657 1.00 25.72 O
ATOM 4 OP2 U B 58 7.580 -30.551 4.763 1.00 26.58 O
ATOM 5 O5' U B 58 5.242 -30.574 5.612 1.00 26.16 O
ATOM 6 C5' U B 58 4.141 -30.089 6.405 1.00 24.93 C
ATOM 7 C4' U B 58 2.875 -30.867 6.110 1.00 24.67 C
ATOM 8 O4' U B 58 2.586 -30.826 4.689 1.00 23.67 O
ATOM 9 C3' U B 58 2.838 -32.356 6.424 1.00 24.72 C
ATOM 10 O3' U B 58 2.575 -32.626 7.786 1.00 25.23 O
ATOM 11 C2' U B 58 1.668 -32.834 5.578 1.00 25.16 C
ATOM 12 O2' U B 58 0.420 -32.641 6.216 1.00 26.24 O
ATOM 13 C1' U B 58 1.775 -31.934 4.347 1.00 24.31 C
ATOM 14 N1 U B 58 2.382 -32.670 3.231 1.00 23.79 N
ATOM 15 C2 U B 58 1.525 -33.343 2.375 1.00 24.11 C
ATOM 16 O2 U B 58 0.309 -33.300 2.479 1.00 24.45 O
ATOM 17 N3 U B 58 2.142 -34.078 1.395 1.00 24.73 N
ATOM 18 C4 U B 58 3.492 -34.211 1.186 1.00 23.57 C
ATOM 19 O4 U B 58 3.891 -35.006 0.339 1.00 23.85 O
ATOM 20 C5 U B 58 4.309 -33.462 2.086 1.00 24.08 C
ATOM 21 C6 U B 58 3.741 -32.729 3.051 1.00 24.44 C
ATOM 22 P G B 59 3.528 -33.632 8.598 1.00 26.86 P
ATOM 23 OP1 G B 59 3.268 -33.381 10.037 1.00 26.96 O
ATOM 24 OP2 G B 59 4.918 -33.555 8.080 1.00 25.88 O
ATOM 25 O5' G B 59 2.998 -35.086 8.241 1.00 27.88 O
TER
ATOM 2 P U A 55 13.793 -35.376 -1.141 1.00 39.94 P
ATOM 3 OP1 U A 55 14.342 -35.525 -2.523 1.00 39.55 O
ATOM 4 OP2 U A 55 14.542 -34.570 -0.127 1.00 38.04 O
ATOM 5 O5' U A 55 12.331 -34.758 -1.247 1.00 38.38 O
ATOM 6 C5' U A 55 11.352 -35.348 -2.112 1.00 37.51 C
ATOM 7 C4' U A 55 10.032 -34.631 -1.970 1.00 37.42 C
ATOM 8 O4' U A 55 9.545 -34.780 -0.610 1.00 36.66 O
ATOM 9 C3' U A 55 10.054 -33.127 -2.192 1.00 37.48 C
ATOM 10 O3' U A 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 11 C2' U A 55 8.824 -32.660 -1.426 1.00 37.36 C
ATOM 12 O2' U A 55 7.646 -32.816 -2.195 1.00 38.69 O
ATOM 13 C1' U A 55 8.815 -33.624 -0.236 1.00 36.04 C
ATOM 14 N1 U A 55 9.433 -33.045 0.966 1.00 34.60 N
ATOM 15 C2 U A 55 8.619 -32.315 1.829 1.00 34.35 C
ATOM 16 O2 U A 55 7.425 -32.175 1.653 1.00 35.79 O
ATOM 17 N3 U A 55 9.259 -31.767 2.912 1.00 31.94 N
ATOM 18 C4 U A 55 10.592 -31.886 3.229 1.00 32.73 C
ATOM 19 O4 U A 55 11.012 -31.384 4.272 1.00 32.36 O
ATOM 20 C5 U A 55 11.360 -32.667 2.304 1.00 33.37 C
ATOM 21 C6 U A 55 10.770 -33.205 1.232 1.00 33.26 C
ATOM 22 P A A 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 23 OP1 A A 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 24 OP2 A A 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 25 O5' A A 56 9.895 -30.240 -3.594 1.00 37.43 O
TER
ATOM 1 O3' A B 57 6.088 -28.576 4.333 1.00 25.52 O
ATOM 2 P U B 58 6.550 -29.681 5.400 1.00 26.34 P
ATOM 3 OP1 U B 58 6.882 -28.960 6.657 1.00 25.72 O
ATOM 4 OP2 U B 58 7.580 -30.551 4.763 1.00 26.58 O
ATOM 5 O5' U B 58 5.242 -30.574 5.612 1.00 26.16 O
ATOM 6 C5' U B 58 4.141 -30.089 6.405 1.00 24.93 C
ATOM 7 C4' U B 58 2.875 -30.867 6.110 1.00 24.67 C
ATOM 8 O4' U B 58 2.586 -30.826 4.689 1.00 23.67 O
ATOM 9 C3' U B 58 2.838 -32.356 6.424 1.00 24.72 C
ATOM 10 O3' U B 58 2.575 -32.626 7.786 1.00 25.23 O
ATOM 11 C2' U B 58 1.668 -32.834 5.578 1.00 25.16 C
ATOM 12 O2' U B 58 0.420 -32.641 6.216 1.00 26.24 O
ATOM 13 C1' U B 58 1.775 -31.934 4.347 1.00 24.31 C
ATOM 14 N1 U B 58 2.382 -32.670 3.231 1.00 23.79 N
ATOM 15 C2 U B 58 1.525 -33.343 2.375 1.00 24.11 C
ATOM 16 O2 U B 58 0.309 -33.300 2.479 1.00 24.45 O
ATOM 17 N3 U B 58 2.142 -34.078 1.395 1.00 24.73 N
ATOM 18 C4 U B 58 3.492 -34.211 1.186 1.00 23.57 C
ATOM 19 O4 U B 58 3.891 -35.006 0.339 1.00 23.85 O
ATOM 20 C5 U B 58 4.309 -33.462 2.086 1.00 24.08 C
ATOM 21 C6 U B 58 3.741 -32.729 3.051 1.00 24.44 C
ATOM 22 P G B 59 3.528 -33.632 8.598 1.00 26.86 P
ATOM 23 OP1 G B 59 3.268 -33.381 10.037 1.00 26.96 O
ATOM 24 OP2 G B 59 4.918 -33.555 8.080 1.00 25.88 O
ATOM 25 O5' G B 59 2.998 -35.086 8.241 1.00 27.88 O
TER
Atoms:
C4: (10.592,-31.886,3.229)
N3: (9.259,-31.767,2.912)
OP1: (14.342,-35.525,-2.523)
OP2: (14.542,-34.570,-0.127)
C2: (8.619,-32.315,1.829)
C1': (8.815,-33.624,-0.236)
C3': (10.054,-33.127,-2.192)
O5': (12.331,-34.758,-1.247)
O4': (9.545,-34.780,-0.610)
C5': (11.352,-35.348,-2.112)
P: (13.793,-35.376,-1.141)
C4': (10.032,-34.631,-1.970)
C2': (8.824,-32.660,-1.426)
O2': (7.646,-32.816,-2.195)
N1: (9.433,-33.045,0.966)
O4: (11.012,-31.384,4.272)
O2: (7.425,-32.175,1.653)
C6: (10.770,-33.205,1.232)
C5: (11.360,-32.667,2.304)
O3': (9.984,-32.769,-3.567)
N3: (9.259,-31.767,2.912)
OP1: (14.342,-35.525,-2.523)
OP2: (14.542,-34.570,-0.127)
C2: (8.619,-32.315,1.829)
C1': (8.815,-33.624,-0.236)
C3': (10.054,-33.127,-2.192)
O5': (12.331,-34.758,-1.247)
O4': (9.545,-34.780,-0.610)
C5': (11.352,-35.348,-2.112)
P: (13.793,-35.376,-1.141)
C4': (10.032,-34.631,-1.970)
C2': (8.824,-32.660,-1.426)
O2': (7.646,-32.816,-2.195)
N1: (9.433,-33.045,0.966)
O4: (11.012,-31.384,4.272)
O2: (7.425,-32.175,1.653)
C6: (10.770,-33.205,1.232)
C5: (11.360,-32.667,2.304)
O3': (9.984,-32.769,-3.567)
C4: (3.492,-34.211,1.186)
N3: (2.142,-34.078,1.395)
OP1: (6.882,-28.960,6.657)
OP2: (7.580,-30.551,4.763)
C2: (1.525,-33.343,2.375)
C1': (1.775,-31.934,4.347)
C3': (2.838,-32.356,6.424)
O5': (5.242,-30.574,5.612)
O4': (2.586,-30.826,4.689)
C5': (4.141,-30.089,6.405)
P: (6.550,-29.681,5.400)
C4': (2.875,-30.867,6.110)
C2': (1.668,-32.834,5.578)
O2': (0.420,-32.641,6.216)
N1: (2.382,-32.670,3.231)
O4: (3.891,-35.006,0.339)
O2: (0.309,-33.300,2.479)
C6: (3.741,-32.729,3.051)
C5: (4.309,-33.462,2.086)
O3': (2.575,-32.626,7.786)
N3: (2.142,-34.078,1.395)
OP1: (6.882,-28.960,6.657)
OP2: (7.580,-30.551,4.763)
C2: (1.525,-33.343,2.375)
C1': (1.775,-31.934,4.347)
C3': (2.838,-32.356,6.424)
O5': (5.242,-30.574,5.612)
O4': (2.586,-30.826,4.689)
C5': (4.141,-30.089,6.405)
P: (6.550,-29.681,5.400)
C4': (2.875,-30.867,6.110)
C2': (1.668,-32.834,5.578)
O2': (0.420,-32.641,6.216)
N1: (2.382,-32.670,3.231)
O4: (3.891,-35.006,0.339)
O2: (0.309,-33.300,2.479)
C6: (3.741,-32.729,3.051)
C5: (4.309,-33.462,2.086)
O3': (2.575,-32.626,7.786)
Image (generated by PyMOL):