Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B55:B58
Extra
PDB:
ATOM 1 O3' G A 54 10.350 -16.925 33.017 1.00 38.14 O
ATOM 2 P U A 55 10.625 -18.385 33.623 1.00 39.43 P
ATOM 3 OP1 U A 55 10.804 -18.238 35.093 1.00 39.41 O
ATOM 4 OP2 U A 55 11.696 -19.024 32.802 1.00 37.73 O
ATOM 5 O5' U A 55 9.264 -19.175 33.358 1.00 38.75 O
ATOM 6 C5' U A 55 8.043 -18.759 33.995 1.00 37.47 C
ATOM 7 C4' U A 55 6.921 -19.728 33.691 1.00 36.63 C
ATOM 8 O4' U A 55 6.497 -19.608 32.305 1.00 36.04 O
ATOM 9 C3' U A 55 7.217 -21.208 33.863 1.00 36.13 C
ATOM 10 O3' U A 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 11 C2' U A 55 6.132 -21.853 33.004 1.00 35.66 C
ATOM 12 O2' U A 55 4.882 -21.909 33.671 1.00 35.80 O
ATOM 13 C1' U A 55 6.033 -20.865 31.837 1.00 34.89 C
ATOM 14 N1 U A 55 6.859 -21.284 30.692 1.00 32.63 N
ATOM 15 C2 U A 55 6.259 -22.035 29.689 1.00 30.83 C
ATOM 16 O2 U A 55 5.077 -22.314 29.679 1.00 31.16 O
ATOM 17 N3 U A 55 7.105 -22.447 28.692 1.00 30.07 N
ATOM 18 C4 U A 55 8.460 -22.185 28.586 1.00 29.76 C
ATOM 19 O4 U A 55 9.106 -22.690 27.665 1.00 28.21 O
ATOM 20 C5 U A 55 8.993 -21.378 29.636 1.00 29.72 C
ATOM 21 C6 U A 55 8.198 -20.964 30.626 1.00 31.19 C
ATOM 22 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 23 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 24 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 25 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
TER
ATOM 1 O3' A B 57 4.436 -25.832 26.907 1.00 24.07 O
ATOM 2 P U B 58 4.857 -24.639 25.926 1.00 24.62 P
ATOM 3 OP1 U B 58 5.405 -25.274 24.703 1.00 23.75 O
ATOM 4 OP2 U B 58 5.691 -23.657 26.680 1.00 25.65 O
ATOM 5 O5' U B 58 3.467 -23.937 25.586 1.00 24.01 O
ATOM 6 C5' U B 58 2.565 -24.555 24.654 1.00 23.03 C
ATOM 7 C4' U B 58 1.248 -23.822 24.606 1.00 22.35 C
ATOM 8 O4' U B 58 0.570 -23.905 25.879 1.00 21.01 O
ATOM 9 C3' U B 58 1.253 -22.342 24.281 1.00 23.49 C
ATOM 10 O3' U B 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 11 C2' U B 58 -0.092 -21.880 24.821 1.00 22.78 C
ATOM 12 O2' U B 58 -1.170 -22.110 23.934 1.00 23.22 O
ATOM 13 C1' U B 58 -0.259 -22.777 26.045 1.00 21.37 C
ATOM 14 N1 U B 58 0.126 -22.088 27.280 1.00 20.58 N
ATOM 15 C2 U B 58 -0.881 -21.528 28.040 1.00 22.03 C
ATOM 16 O2 U B 58 -2.064 -21.645 27.755 1.00 24.06 O
ATOM 17 N3 U B 58 -0.452 -20.831 29.146 1.00 20.98 N
ATOM 18 C4 U B 58 0.853 -20.660 29.561 1.00 20.93 C
ATOM 19 O4 U B 58 1.089 -19.919 30.519 1.00 22.09 O
ATOM 20 C5 U B 58 1.830 -21.308 28.737 1.00 19.87 C
ATOM 21 C6 U B 58 1.441 -21.981 27.653 1.00 19.96 C
ATOM 22 P G B 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 23 OP1 G B 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 24 OP2 G B 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 25 O5' G B 59 0.471 -19.764 22.741 1.00 30.45 O
TER
ATOM 2 P U A 55 10.625 -18.385 33.623 1.00 39.43 P
ATOM 3 OP1 U A 55 10.804 -18.238 35.093 1.00 39.41 O
ATOM 4 OP2 U A 55 11.696 -19.024 32.802 1.00 37.73 O
ATOM 5 O5' U A 55 9.264 -19.175 33.358 1.00 38.75 O
ATOM 6 C5' U A 55 8.043 -18.759 33.995 1.00 37.47 C
ATOM 7 C4' U A 55 6.921 -19.728 33.691 1.00 36.63 C
ATOM 8 O4' U A 55 6.497 -19.608 32.305 1.00 36.04 O
ATOM 9 C3' U A 55 7.217 -21.208 33.863 1.00 36.13 C
ATOM 10 O3' U A 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 11 C2' U A 55 6.132 -21.853 33.004 1.00 35.66 C
ATOM 12 O2' U A 55 4.882 -21.909 33.671 1.00 35.80 O
ATOM 13 C1' U A 55 6.033 -20.865 31.837 1.00 34.89 C
ATOM 14 N1 U A 55 6.859 -21.284 30.692 1.00 32.63 N
ATOM 15 C2 U A 55 6.259 -22.035 29.689 1.00 30.83 C
ATOM 16 O2 U A 55 5.077 -22.314 29.679 1.00 31.16 O
ATOM 17 N3 U A 55 7.105 -22.447 28.692 1.00 30.07 N
ATOM 18 C4 U A 55 8.460 -22.185 28.586 1.00 29.76 C
ATOM 19 O4 U A 55 9.106 -22.690 27.665 1.00 28.21 O
ATOM 20 C5 U A 55 8.993 -21.378 29.636 1.00 29.72 C
ATOM 21 C6 U A 55 8.198 -20.964 30.626 1.00 31.19 C
ATOM 22 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 23 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 24 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 25 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
TER
ATOM 1 O3' A B 57 4.436 -25.832 26.907 1.00 24.07 O
ATOM 2 P U B 58 4.857 -24.639 25.926 1.00 24.62 P
ATOM 3 OP1 U B 58 5.405 -25.274 24.703 1.00 23.75 O
ATOM 4 OP2 U B 58 5.691 -23.657 26.680 1.00 25.65 O
ATOM 5 O5' U B 58 3.467 -23.937 25.586 1.00 24.01 O
ATOM 6 C5' U B 58 2.565 -24.555 24.654 1.00 23.03 C
ATOM 7 C4' U B 58 1.248 -23.822 24.606 1.00 22.35 C
ATOM 8 O4' U B 58 0.570 -23.905 25.879 1.00 21.01 O
ATOM 9 C3' U B 58 1.253 -22.342 24.281 1.00 23.49 C
ATOM 10 O3' U B 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 11 C2' U B 58 -0.092 -21.880 24.821 1.00 22.78 C
ATOM 12 O2' U B 58 -1.170 -22.110 23.934 1.00 23.22 O
ATOM 13 C1' U B 58 -0.259 -22.777 26.045 1.00 21.37 C
ATOM 14 N1 U B 58 0.126 -22.088 27.280 1.00 20.58 N
ATOM 15 C2 U B 58 -0.881 -21.528 28.040 1.00 22.03 C
ATOM 16 O2 U B 58 -2.064 -21.645 27.755 1.00 24.06 O
ATOM 17 N3 U B 58 -0.452 -20.831 29.146 1.00 20.98 N
ATOM 18 C4 U B 58 0.853 -20.660 29.561 1.00 20.93 C
ATOM 19 O4 U B 58 1.089 -19.919 30.519 1.00 22.09 O
ATOM 20 C5 U B 58 1.830 -21.308 28.737 1.00 19.87 C
ATOM 21 C6 U B 58 1.441 -21.981 27.653 1.00 19.96 C
ATOM 22 P G B 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 23 OP1 G B 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 24 OP2 G B 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 25 O5' G B 59 0.471 -19.764 22.741 1.00 30.45 O
TER
Atoms:
C4: (8.460,-22.185,28.586)
N3: (7.105,-22.447,28.692)
OP1: (10.804,-18.238,35.093)
OP2: (11.696,-19.024,32.802)
C2: (6.259,-22.035,29.689)
C1': (6.033,-20.865,31.837)
C3': (7.217,-21.208,33.863)
O5': (9.264,-19.175,33.358)
O4': (6.497,-19.608,32.305)
C5': (8.043,-18.759,33.995)
P: (10.625,-18.385,33.623)
C4': (6.921,-19.728,33.691)
C2': (6.132,-21.853,33.004)
O2': (4.882,-21.909,33.671)
N1: (6.859,-21.284,30.692)
O4: (9.106,-22.690,27.665)
O2: (5.077,-22.314,29.679)
C6: (8.198,-20.964,30.626)
C5: (8.993,-21.378,29.636)
O3': (7.158,-21.620,35.222)
N3: (7.105,-22.447,28.692)
OP1: (10.804,-18.238,35.093)
OP2: (11.696,-19.024,32.802)
C2: (6.259,-22.035,29.689)
C1': (6.033,-20.865,31.837)
C3': (7.217,-21.208,33.863)
O5': (9.264,-19.175,33.358)
O4': (6.497,-19.608,32.305)
C5': (8.043,-18.759,33.995)
P: (10.625,-18.385,33.623)
C4': (6.921,-19.728,33.691)
C2': (6.132,-21.853,33.004)
O2': (4.882,-21.909,33.671)
N1: (6.859,-21.284,30.692)
O4: (9.106,-22.690,27.665)
O2: (5.077,-22.314,29.679)
C6: (8.198,-20.964,30.626)
C5: (8.993,-21.378,29.636)
O3': (7.158,-21.620,35.222)
C4: (0.853,-20.660,29.561)
N3: (-0.452,-20.831,29.146)
OP1: (5.405,-25.274,24.703)
OP2: (5.691,-23.657,26.680)
C2: (-0.881,-21.528,28.040)
C1': (-0.259,-22.777,26.045)
C3': (1.253,-22.342,24.281)
O5': (3.467,-23.937,25.586)
O4': (0.570,-23.905,25.879)
C5': (2.565,-24.555,24.654)
P: (4.857,-24.639,25.926)
C4': (1.248,-23.822,24.606)
C2': (-0.092,-21.880,24.821)
O2': (-1.170,-22.110,23.934)
N1: (0.126,-22.088,27.280)
O4: (1.089,-19.919,30.519)
O2: (-2.064,-21.645,27.755)
C6: (1.441,-21.981,27.653)
C5: (1.830,-21.308,28.737)
O3': (1.284,-22.159,22.886)
N3: (-0.452,-20.831,29.146)
OP1: (5.405,-25.274,24.703)
OP2: (5.691,-23.657,26.680)
C2: (-0.881,-21.528,28.040)
C1': (-0.259,-22.777,26.045)
C3': (1.253,-22.342,24.281)
O5': (3.467,-23.937,25.586)
O4': (0.570,-23.905,25.879)
C5': (2.565,-24.555,24.654)
P: (4.857,-24.639,25.926)
C4': (1.248,-23.822,24.606)
C2': (-0.092,-21.880,24.821)
O2': (-1.170,-22.110,23.934)
N1: (0.126,-22.088,27.280)
O4: (1.089,-19.919,30.519)
O2: (-2.064,-21.645,27.755)
C6: (1.441,-21.981,27.653)
C5: (1.830,-21.308,28.737)
O3': (1.284,-22.159,22.886)
Image (generated by PyMOL):