Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A619:A620
Extra
PDB:
ATOM 1 O3' A A 618 46.921 118.927 98.401 1.00 33.36 O
ATOM 2 P A A 619 47.027 120.523 98.277 1.00 34.68 P
ATOM 3 OP1 A A 619 45.923 121.116 99.067 1.00 34.43 O
ATOM 4 OP2 A A 619 47.152 120.837 96.842 1.00 35.62 O
ATOM 5 O5' A A 619 48.393 120.907 98.986 1.00 33.36 O
ATOM 6 C5' A A 619 49.631 120.856 98.281 1.00 33.75 C
ATOM 7 C4' A A 619 50.644 120.160 99.132 1.00 34.46 C
ATOM 8 O4' A A 619 50.918 120.970 100.297 1.00 33.99 O
ATOM 9 C3' A A 619 50.139 118.834 99.673 1.00 34.56 C
ATOM 10 O3' A A 619 51.262 118.006 99.821 1.00 35.74 O
ATOM 11 C2' A A 619 49.533 119.218 101.018 1.00 33.92 C
ATOM 12 O2' A A 619 49.441 118.175 101.966 1.00 34.89 O
ATOM 13 C1' A A 619 50.504 120.293 101.465 1.00 33.40 C
ATOM 14 N9 A A 619 49.891 121.285 102.318 1.00 32.31 N
ATOM 15 C8 A A 619 48.769 122.027 102.077 1.00 34.31 C
ATOM 16 N7 A A 619 48.524 122.923 103.000 1.00 34.71 N
ATOM 17 C5 A A 619 49.538 122.728 103.922 1.00 31.81 C
ATOM 18 C6 A A 619 49.847 123.368 105.117 1.00 31.04 C
ATOM 19 N6 A A 619 49.153 124.389 105.598 1.00 32.55 N
ATOM 20 N1 A A 619 50.914 122.934 105.803 1.00 30.08 N
ATOM 21 C2 A A 619 51.632 121.940 105.290 1.00 30.55 C
ATOM 22 N3 A A 619 51.457 121.271 104.166 1.00 30.63 N
ATOM 23 C4 A A 619 50.374 121.713 103.521 1.00 31.62 C
ATOM 24 P A A 620 51.476 116.800 98.803 1.00 37.01 P
ATOM 25 OP1 A A 620 50.122 116.477 98.325 1.00 36.66 O
ATOM 26 OP2 A A 620 52.263 115.781 99.529 1.00 37.63 O
ATOM 27 O5' A A 620 52.335 117.418 97.612 1.00 35.79 O
TER
ATOM 1 O3' A B 619 51.262 118.006 99.821 1.00 35.74 O
ATOM 2 P A B 620 51.476 116.800 98.803 1.00 37.01 P
ATOM 3 OP1 A B 620 50.122 116.477 98.325 1.00 36.66 O
ATOM 4 OP2 A B 620 52.263 115.781 99.529 1.00 37.63 O
ATOM 5 O5' A B 620 52.335 117.418 97.612 1.00 35.79 O
ATOM 6 C5' A B 620 51.708 118.041 96.474 1.00 36.41 C
ATOM 7 C4' A B 620 52.072 117.294 95.216 1.00 36.52 C
ATOM 8 O4' A B 620 51.388 116.024 95.211 1.00 37.62 O
ATOM 9 C3' A B 620 51.682 117.926 93.898 1.00 36.53 C
ATOM 10 O3' A B 620 52.654 118.893 93.545 1.00 39.28 O
ATOM 11 C2' A B 620 51.685 116.718 92.975 1.00 37.49 C
ATOM 12 O2' A B 620 53.002 116.278 92.691 1.00 37.62 O
ATOM 13 C1' A B 620 51.045 115.667 93.883 1.00 37.32 C
ATOM 14 N9 A B 620 49.580 115.564 93.808 1.00 36.99 N
ATOM 15 C8 A B 620 48.702 115.758 94.847 1.00 37.10 C
ATOM 16 N7 A B 620 47.453 115.545 94.535 1.00 36.64 N
ATOM 17 C5 A B 620 47.503 115.197 93.195 1.00 38.02 C
ATOM 18 C6 A B 620 46.497 114.823 92.281 1.00 39.74 C
ATOM 19 N6 A B 620 45.200 114.743 92.601 1.00 40.24 N
ATOM 20 N1 A B 620 46.874 114.529 91.020 1.00 39.45 N
ATOM 21 C2 A B 620 48.175 114.618 90.714 1.00 38.59 C
ATOM 22 N3 A B 620 49.210 114.956 91.485 1.00 36.57 N
ATOM 23 C4 A B 620 48.803 115.228 92.728 1.00 36.52 C
ATOM 24 P C B 621 52.198 120.290 92.896 1.00 41.68 P
ATOM 25 OP1 C B 621 53.365 121.198 92.872 1.00 40.87 O
ATOM 26 OP2 C B 621 50.932 120.754 93.518 1.00 43.35 O
ATOM 27 O5' C B 621 51.878 119.891 91.396 1.00 38.36 O
TER
ATOM 2 P A A 619 47.027 120.523 98.277 1.00 34.68 P
ATOM 3 OP1 A A 619 45.923 121.116 99.067 1.00 34.43 O
ATOM 4 OP2 A A 619 47.152 120.837 96.842 1.00 35.62 O
ATOM 5 O5' A A 619 48.393 120.907 98.986 1.00 33.36 O
ATOM 6 C5' A A 619 49.631 120.856 98.281 1.00 33.75 C
ATOM 7 C4' A A 619 50.644 120.160 99.132 1.00 34.46 C
ATOM 8 O4' A A 619 50.918 120.970 100.297 1.00 33.99 O
ATOM 9 C3' A A 619 50.139 118.834 99.673 1.00 34.56 C
ATOM 10 O3' A A 619 51.262 118.006 99.821 1.00 35.74 O
ATOM 11 C2' A A 619 49.533 119.218 101.018 1.00 33.92 C
ATOM 12 O2' A A 619 49.441 118.175 101.966 1.00 34.89 O
ATOM 13 C1' A A 619 50.504 120.293 101.465 1.00 33.40 C
ATOM 14 N9 A A 619 49.891 121.285 102.318 1.00 32.31 N
ATOM 15 C8 A A 619 48.769 122.027 102.077 1.00 34.31 C
ATOM 16 N7 A A 619 48.524 122.923 103.000 1.00 34.71 N
ATOM 17 C5 A A 619 49.538 122.728 103.922 1.00 31.81 C
ATOM 18 C6 A A 619 49.847 123.368 105.117 1.00 31.04 C
ATOM 19 N6 A A 619 49.153 124.389 105.598 1.00 32.55 N
ATOM 20 N1 A A 619 50.914 122.934 105.803 1.00 30.08 N
ATOM 21 C2 A A 619 51.632 121.940 105.290 1.00 30.55 C
ATOM 22 N3 A A 619 51.457 121.271 104.166 1.00 30.63 N
ATOM 23 C4 A A 619 50.374 121.713 103.521 1.00 31.62 C
ATOM 24 P A A 620 51.476 116.800 98.803 1.00 37.01 P
ATOM 25 OP1 A A 620 50.122 116.477 98.325 1.00 36.66 O
ATOM 26 OP2 A A 620 52.263 115.781 99.529 1.00 37.63 O
ATOM 27 O5' A A 620 52.335 117.418 97.612 1.00 35.79 O
TER
ATOM 1 O3' A B 619 51.262 118.006 99.821 1.00 35.74 O
ATOM 2 P A B 620 51.476 116.800 98.803 1.00 37.01 P
ATOM 3 OP1 A B 620 50.122 116.477 98.325 1.00 36.66 O
ATOM 4 OP2 A B 620 52.263 115.781 99.529 1.00 37.63 O
ATOM 5 O5' A B 620 52.335 117.418 97.612 1.00 35.79 O
ATOM 6 C5' A B 620 51.708 118.041 96.474 1.00 36.41 C
ATOM 7 C4' A B 620 52.072 117.294 95.216 1.00 36.52 C
ATOM 8 O4' A B 620 51.388 116.024 95.211 1.00 37.62 O
ATOM 9 C3' A B 620 51.682 117.926 93.898 1.00 36.53 C
ATOM 10 O3' A B 620 52.654 118.893 93.545 1.00 39.28 O
ATOM 11 C2' A B 620 51.685 116.718 92.975 1.00 37.49 C
ATOM 12 O2' A B 620 53.002 116.278 92.691 1.00 37.62 O
ATOM 13 C1' A B 620 51.045 115.667 93.883 1.00 37.32 C
ATOM 14 N9 A B 620 49.580 115.564 93.808 1.00 36.99 N
ATOM 15 C8 A B 620 48.702 115.758 94.847 1.00 37.10 C
ATOM 16 N7 A B 620 47.453 115.545 94.535 1.00 36.64 N
ATOM 17 C5 A B 620 47.503 115.197 93.195 1.00 38.02 C
ATOM 18 C6 A B 620 46.497 114.823 92.281 1.00 39.74 C
ATOM 19 N6 A B 620 45.200 114.743 92.601 1.00 40.24 N
ATOM 20 N1 A B 620 46.874 114.529 91.020 1.00 39.45 N
ATOM 21 C2 A B 620 48.175 114.618 90.714 1.00 38.59 C
ATOM 22 N3 A B 620 49.210 114.956 91.485 1.00 36.57 N
ATOM 23 C4 A B 620 48.803 115.228 92.728 1.00 36.52 C
ATOM 24 P C B 621 52.198 120.290 92.896 1.00 41.68 P
ATOM 25 OP1 C B 621 53.365 121.198 92.872 1.00 40.87 O
ATOM 26 OP2 C B 621 50.932 120.754 93.518 1.00 43.35 O
ATOM 27 O5' C B 621 51.878 119.891 91.396 1.00 38.36 O
TER
Atoms:
OP1: (45.923,121.116,99.067)
OP2: (47.152,120.837,96.842)
C3': (50.139,118.834,99.673)
C1': (50.504,120.293,101.465)
C5': (49.631,120.856,98.281)
O4': (50.918,120.970,100.297)
C8: (48.769,122.027,102.077)
O2': (49.441,118.175,101.966)
C6: (49.847,123.368,105.117)
C5: (49.538,122.728,103.922)
C4: (50.374,121.713,103.521)
P: (47.027,120.523,98.277)
C4': (50.644,120.160,99.132)
C2': (49.533,119.218,101.018)
C2: (51.632,121.940,105.290)
N1: (50.914,122.934,105.803)
N3: (51.457,121.271,104.166)
N6: (49.153,124.389,105.598)
N7: (48.524,122.923,103.000)
N9: (49.891,121.285,102.318)
O5': (48.393,120.907,98.986)
O3': (51.262,118.006,99.821)
OP2: (47.152,120.837,96.842)
C3': (50.139,118.834,99.673)
C1': (50.504,120.293,101.465)
C5': (49.631,120.856,98.281)
O4': (50.918,120.970,100.297)
C8: (48.769,122.027,102.077)
O2': (49.441,118.175,101.966)
C6: (49.847,123.368,105.117)
C5: (49.538,122.728,103.922)
C4: (50.374,121.713,103.521)
P: (47.027,120.523,98.277)
C4': (50.644,120.160,99.132)
C2': (49.533,119.218,101.018)
C2: (51.632,121.940,105.290)
N1: (50.914,122.934,105.803)
N3: (51.457,121.271,104.166)
N6: (49.153,124.389,105.598)
N7: (48.524,122.923,103.000)
N9: (49.891,121.285,102.318)
O5': (48.393,120.907,98.986)
O3': (51.262,118.006,99.821)
OP1: (50.122,116.477,98.325)
OP2: (52.263,115.781,99.529)
C3': (51.682,117.926,93.898)
C1': (51.045,115.667,93.883)
C5': (51.708,118.041,96.474)
O4': (51.388,116.024,95.211)
C8: (48.702,115.758,94.847)
O2': (53.002,116.278,92.691)
C6: (46.497,114.823,92.281)
C5: (47.503,115.197,93.195)
C4: (48.803,115.228,92.728)
P: (51.476,116.800,98.803)
C4': (52.072,117.294,95.216)
C2': (51.685,116.718,92.975)
C2: (48.175,114.618,90.714)
N1: (46.874,114.529,91.020)
N3: (49.210,114.956,91.485)
N6: (45.200,114.743,92.601)
N7: (47.453,115.545,94.535)
N9: (49.580,115.564,93.808)
O5': (52.335,117.418,97.612)
O3': (52.654,118.893,93.545)
OP2: (52.263,115.781,99.529)
C3': (51.682,117.926,93.898)
C1': (51.045,115.667,93.883)
C5': (51.708,118.041,96.474)
O4': (51.388,116.024,95.211)
C8: (48.702,115.758,94.847)
O2': (53.002,116.278,92.691)
C6: (46.497,114.823,92.281)
C5: (47.503,115.197,93.195)
C4: (48.803,115.228,92.728)
P: (51.476,116.800,98.803)
C4': (52.072,117.294,95.216)
C2': (51.685,116.718,92.975)
C2: (48.175,114.618,90.714)
N1: (46.874,114.529,91.020)
N3: (49.210,114.956,91.485)
N6: (45.200,114.743,92.601)
N7: (47.453,115.545,94.535)
N9: (49.580,115.564,93.808)
O5': (52.335,117.418,97.612)
O3': (52.654,118.893,93.545)
Image (generated by PyMOL):