Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0619:0620
Extra
PDB:
ATOM 1 O3' A A 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 2 P A A 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 3 OP1 A A 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 4 OP2 A A 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 5 O5' A A 619 48.123 121.029 98.649 1.00 30.59 O
ATOM 6 C5' A A 619 49.385 120.922 97.966 1.00 30.39 C
ATOM 7 C4' A A 619 50.372 120.167 98.820 1.00 29.98 C
ATOM 8 O4' A A 619 50.702 120.971 99.982 1.00 28.28 O
ATOM 9 C3' A A 619 49.879 118.827 99.349 1.00 28.78 C
ATOM 10 O3' A A 619 50.964 117.921 99.420 1.00 28.54 O
ATOM 11 C2' A A 619 49.372 119.179 100.745 1.00 29.56 C
ATOM 12 O2' A A 619 49.453 118.090 101.645 1.00 28.99 O
ATOM 13 C1' A A 619 50.337 120.289 101.163 1.00 27.95 C
ATOM 14 N9 A A 619 49.734 121.278 102.052 1.00 27.79 N
ATOM 15 C8 A A 619 48.585 121.992 101.832 1.00 27.99 C
ATOM 16 N7 A A 619 48.314 122.862 102.774 1.00 27.59 N
ATOM 17 C5 A A 619 49.346 122.701 103.683 1.00 25.53 C
ATOM 18 C6 A A 619 49.634 123.336 104.891 1.00 23.71 C
ATOM 19 N6 A A 619 48.872 124.287 105.416 1.00 23.71 N
ATOM 20 N1 A A 619 50.743 122.951 105.555 1.00 23.29 N
ATOM 21 C2 A A 619 51.497 121.980 105.033 1.00 23.12 C
ATOM 22 N3 A A 619 51.327 121.299 103.906 1.00 25.90 N
ATOM 23 C4 A A 619 50.221 121.716 103.263 1.00 27.79 C
ATOM 24 P A A 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 25 OP1 A A 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 26 OP2 A A 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 27 O5' A A 620 52.053 117.451 97.221 1.00 28.71 O
TER
ATOM 1 O3' A B 619 50.964 117.921 99.420 1.00 28.54 O
ATOM 2 P A B 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 3 OP1 A B 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 4 OP2 A B 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 5 O5' A B 620 52.053 117.451 97.221 1.00 28.71 O
ATOM 6 C5' A B 620 51.497 118.099 96.073 1.00 27.21 C
ATOM 7 C4' A B 620 51.912 117.363 94.830 1.00 28.15 C
ATOM 8 O4' A B 620 51.296 116.053 94.788 1.00 28.96 O
ATOM 9 C3' A B 620 51.514 118.023 93.531 1.00 27.80 C
ATOM 10 O3' A B 620 52.523 118.965 93.224 1.00 31.20 O
ATOM 11 C2' A B 620 51.518 116.844 92.572 1.00 28.04 C
ATOM 12 O2' A B 620 52.831 116.465 92.212 1.00 28.17 O
ATOM 13 C1' A B 620 50.935 115.738 93.456 1.00 28.17 C
ATOM 14 N9 A B 620 49.471 115.645 93.401 1.00 29.68 N
ATOM 15 C8 A B 620 48.585 115.886 94.426 1.00 28.68 C
ATOM 16 N7 A B 620 47.333 115.732 94.092 1.00 26.94 N
ATOM 17 C5 A B 620 47.390 115.360 92.757 1.00 29.68 C
ATOM 18 C6 A B 620 46.389 115.039 91.824 1.00 31.04 C
ATOM 19 N6 A B 620 45.083 115.026 92.113 1.00 29.62 N
ATOM 20 N1 A B 620 46.781 114.718 90.573 1.00 30.70 N
ATOM 21 C2 A B 620 48.086 114.710 90.294 1.00 29.72 C
ATOM 22 N3 A B 620 49.118 114.981 91.085 1.00 29.76 N
ATOM 23 C4 A B 620 48.698 115.304 92.318 1.00 28.76 C
ATOM 24 P C B 621 52.133 120.444 92.762 1.00 33.36 P
ATOM 25 OP1 C B 621 53.341 121.269 92.978 1.00 36.07 O
ATOM 26 OP2 C B 621 50.858 120.847 93.384 1.00 35.41 O
ATOM 27 O5' C B 621 51.905 120.280 91.198 1.00 34.77 O
TER
ATOM 2 P A A 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 3 OP1 A A 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 4 OP2 A A 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 5 O5' A A 619 48.123 121.029 98.649 1.00 30.59 O
ATOM 6 C5' A A 619 49.385 120.922 97.966 1.00 30.39 C
ATOM 7 C4' A A 619 50.372 120.167 98.820 1.00 29.98 C
ATOM 8 O4' A A 619 50.702 120.971 99.982 1.00 28.28 O
ATOM 9 C3' A A 619 49.879 118.827 99.349 1.00 28.78 C
ATOM 10 O3' A A 619 50.964 117.921 99.420 1.00 28.54 O
ATOM 11 C2' A A 619 49.372 119.179 100.745 1.00 29.56 C
ATOM 12 O2' A A 619 49.453 118.090 101.645 1.00 28.99 O
ATOM 13 C1' A A 619 50.337 120.289 101.163 1.00 27.95 C
ATOM 14 N9 A A 619 49.734 121.278 102.052 1.00 27.79 N
ATOM 15 C8 A A 619 48.585 121.992 101.832 1.00 27.99 C
ATOM 16 N7 A A 619 48.314 122.862 102.774 1.00 27.59 N
ATOM 17 C5 A A 619 49.346 122.701 103.683 1.00 25.53 C
ATOM 18 C6 A A 619 49.634 123.336 104.891 1.00 23.71 C
ATOM 19 N6 A A 619 48.872 124.287 105.416 1.00 23.71 N
ATOM 20 N1 A A 619 50.743 122.951 105.555 1.00 23.29 N
ATOM 21 C2 A A 619 51.497 121.980 105.033 1.00 23.12 C
ATOM 22 N3 A A 619 51.327 121.299 103.906 1.00 25.90 N
ATOM 23 C4 A A 619 50.221 121.716 103.263 1.00 27.79 C
ATOM 24 P A A 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 25 OP1 A A 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 26 OP2 A A 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 27 O5' A A 620 52.053 117.451 97.221 1.00 28.71 O
TER
ATOM 1 O3' A B 619 50.964 117.921 99.420 1.00 28.54 O
ATOM 2 P A B 620 51.115 116.779 98.307 1.00 29.00 P
ATOM 3 OP1 A B 620 49.796 116.537 97.682 1.00 30.28 O
ATOM 4 OP2 A B 620 51.859 115.645 98.887 1.00 28.48 O
ATOM 5 O5' A B 620 52.053 117.451 97.221 1.00 28.71 O
ATOM 6 C5' A B 620 51.497 118.099 96.073 1.00 27.21 C
ATOM 7 C4' A B 620 51.912 117.363 94.830 1.00 28.15 C
ATOM 8 O4' A B 620 51.296 116.053 94.788 1.00 28.96 O
ATOM 9 C3' A B 620 51.514 118.023 93.531 1.00 27.80 C
ATOM 10 O3' A B 620 52.523 118.965 93.224 1.00 31.20 O
ATOM 11 C2' A B 620 51.518 116.844 92.572 1.00 28.04 C
ATOM 12 O2' A B 620 52.831 116.465 92.212 1.00 28.17 O
ATOM 13 C1' A B 620 50.935 115.738 93.456 1.00 28.17 C
ATOM 14 N9 A B 620 49.471 115.645 93.401 1.00 29.68 N
ATOM 15 C8 A B 620 48.585 115.886 94.426 1.00 28.68 C
ATOM 16 N7 A B 620 47.333 115.732 94.092 1.00 26.94 N
ATOM 17 C5 A B 620 47.390 115.360 92.757 1.00 29.68 C
ATOM 18 C6 A B 620 46.389 115.039 91.824 1.00 31.04 C
ATOM 19 N6 A B 620 45.083 115.026 92.113 1.00 29.62 N
ATOM 20 N1 A B 620 46.781 114.718 90.573 1.00 30.70 N
ATOM 21 C2 A B 620 48.086 114.710 90.294 1.00 29.72 C
ATOM 22 N3 A B 620 49.118 114.981 91.085 1.00 29.76 N
ATOM 23 C4 A B 620 48.698 115.304 92.318 1.00 28.76 C
ATOM 24 P C B 621 52.133 120.444 92.762 1.00 33.36 P
ATOM 25 OP1 C B 621 53.341 121.269 92.978 1.00 36.07 O
ATOM 26 OP2 C B 621 50.858 120.847 93.384 1.00 35.41 O
ATOM 27 O5' C B 621 51.905 120.280 91.198 1.00 34.77 O
TER
Atoms:
OP1: (45.651,121.168,98.740)
OP2: (46.849,120.913,96.480)
C3': (49.879,118.827,99.349)
C1': (50.337,120.289,101.163)
C5': (49.385,120.922,97.966)
O4': (50.702,120.971,99.982)
C8: (48.585,121.992,101.832)
O2': (49.453,118.090,101.645)
C6: (49.634,123.336,104.891)
C5: (49.346,122.701,103.683)
C4: (50.221,121.716,103.263)
P: (46.765,120.601,97.936)
C4': (50.372,120.167,98.820)
C2': (49.372,119.179,100.745)
C2: (51.497,121.980,105.033)
N1: (50.743,122.951,105.555)
N3: (51.327,121.299,103.906)
N6: (48.872,124.287,105.416)
N7: (48.314,122.862,102.774)
N9: (49.734,121.278,102.052)
O5': (48.123,121.029,98.649)
O3': (50.964,117.921,99.420)
OP2: (46.849,120.913,96.480)
C3': (49.879,118.827,99.349)
C1': (50.337,120.289,101.163)
C5': (49.385,120.922,97.966)
O4': (50.702,120.971,99.982)
C8: (48.585,121.992,101.832)
O2': (49.453,118.090,101.645)
C6: (49.634,123.336,104.891)
C5: (49.346,122.701,103.683)
C4: (50.221,121.716,103.263)
P: (46.765,120.601,97.936)
C4': (50.372,120.167,98.820)
C2': (49.372,119.179,100.745)
C2: (51.497,121.980,105.033)
N1: (50.743,122.951,105.555)
N3: (51.327,121.299,103.906)
N6: (48.872,124.287,105.416)
N7: (48.314,122.862,102.774)
N9: (49.734,121.278,102.052)
O5': (48.123,121.029,98.649)
O3': (50.964,117.921,99.420)
OP1: (49.796,116.537,97.682)
OP2: (51.859,115.645,98.887)
C3': (51.514,118.023,93.531)
C1': (50.935,115.738,93.456)
C5': (51.497,118.099,96.073)
O4': (51.296,116.053,94.788)
C8: (48.585,115.886,94.426)
O2': (52.831,116.465,92.212)
C6: (46.389,115.039,91.824)
C5: (47.390,115.360,92.757)
C4: (48.698,115.304,92.318)
P: (51.115,116.779,98.307)
C4': (51.912,117.363,94.830)
C2': (51.518,116.844,92.572)
C2: (48.086,114.710,90.294)
N1: (46.781,114.718,90.573)
N3: (49.118,114.981,91.085)
N6: (45.083,115.026,92.113)
N7: (47.333,115.732,94.092)
N9: (49.471,115.645,93.401)
O5': (52.053,117.451,97.221)
O3': (52.523,118.965,93.224)
OP2: (51.859,115.645,98.887)
C3': (51.514,118.023,93.531)
C1': (50.935,115.738,93.456)
C5': (51.497,118.099,96.073)
O4': (51.296,116.053,94.788)
C8: (48.585,115.886,94.426)
O2': (52.831,116.465,92.212)
C6: (46.389,115.039,91.824)
C5: (47.390,115.360,92.757)
C4: (48.698,115.304,92.318)
P: (51.115,116.779,98.307)
C4': (51.912,117.363,94.830)
C2': (51.518,116.844,92.572)
C2: (48.086,114.710,90.294)
N1: (46.781,114.718,90.573)
N3: (49.118,114.981,91.085)
N6: (45.083,115.026,92.113)
N7: (47.333,115.732,94.092)
N9: (49.471,115.645,93.401)
O5': (52.053,117.451,97.221)
O3': (52.523,118.965,93.224)
Image (generated by PyMOL):