ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0619:0620

Extra

PDB:
ATOM 1 O3' A A 618 46.997 119.223 98.639 1.00 38.99 O
ATOM 2 P A A 619 47.135 120.793 98.289 1.00 41.23 P
ATOM 3 OP1 A A 619 46.064 121.519 99.008 1.00 41.92 O
ATOM 4 OP2 A A 619 47.249 120.922 96.812 1.00 40.19 O
ATOM 5 O5' A A 619 48.504 121.251 98.961 1.00 38.87 O
ATOM 6 C5' A A 619 49.751 121.082 98.278 1.00 38.12 C
ATOM 7 C4' A A 619 50.708 120.303 99.139 1.00 37.12 C
ATOM 8 O4' A A 619 51.014 121.081 100.325 1.00 36.11 O
ATOM 9 C3' A A 619 50.196 118.962 99.629 1.00 35.90 C
ATOM 10 O3' A A 619 51.283 118.062 99.713 1.00 35.49 O
ATOM 11 C2' A A 619 49.645 119.294 101.016 1.00 37.54 C
ATOM 12 O2' A A 619 49.684 118.172 101.881 1.00 38.28 O
ATOM 13 C1' A A 619 50.600 120.392 101.486 1.00 36.25 C
ATOM 14 N9 A A 619 50.003 121.397 102.368 1.00 37.69 N
ATOM 15 C8 A A 619 48.832 122.094 102.165 1.00 39.99 C
ATOM 16 N7 A A 619 48.588 123.005 103.082 1.00 39.13 N
ATOM 17 C5 A A 619 49.657 122.889 103.957 1.00 36.14 C
ATOM 18 C6 A A 619 49.988 123.576 105.131 1.00 34.37 C
ATOM 19 N6 A A 619 49.258 124.564 105.643 1.00 32.44 N
ATOM 20 N1 A A 619 51.115 123.212 105.771 1.00 34.78 N
ATOM 21 C2 A A 619 51.855 122.227 105.254 1.00 34.89 C
ATOM 22 N3 A A 619 51.654 121.508 104.159 1.00 34.80 N
ATOM 23 C4 A A 619 50.525 121.889 103.544 1.00 36.73 C
ATOM 24 P A A 620 51.412 116.875 98.651 1.00 35.99 P
ATOM 25 OP1 A A 620 50.102 116.625 98.013 1.00 39.08 O
ATOM 26 OP2 A A 620 52.114 115.772 99.320 1.00 35.72 O
ATOM 27 O5' A A 620 52.352 117.472 97.530 1.00 35.36 O
TER

ATOM 1 O3' A B 619 51.283 118.062 99.713 1.00 35.49 O
ATOM 2 P A B 620 51.412 116.875 98.651 1.00 35.99 P
ATOM 3 OP1 A B 620 50.102 116.625 98.013 1.00 39.08 O
ATOM 4 OP2 A B 620 52.114 115.772 99.320 1.00 35.72 O
ATOM 5 O5' A B 620 52.352 117.472 97.530 1.00 35.36 O
ATOM 6 C5' A B 620 51.796 118.151 96.402 1.00 34.76 C
ATOM 7 C4' A B 620 52.221 117.463 95.132 1.00 36.21 C
ATOM 8 O4' A B 620 51.605 116.156 95.038 1.00 34.72 O
ATOM 9 C3' A B 620 51.827 118.177 93.857 1.00 35.30 C
ATOM 10 O3' A B 620 52.823 119.147 93.571 1.00 36.96 O
ATOM 11 C2' A B 620 51.801 117.040 92.844 1.00 36.46 C
ATOM 12 O2' A B 620 53.087 116.694 92.369 1.00 37.28 O
ATOM 13 C1' A B 620 51.243 115.894 93.694 1.00 35.56 C
ATOM 14 N9 A B 620 49.785 115.798 93.652 1.00 37.29 N
ATOM 15 C8 A B 620 48.908 116.045 94.683 1.00 38.04 C
ATOM 16 N7 A B 620 47.654 115.867 94.365 1.00 38.76 N
ATOM 17 C5 A B 620 47.702 115.475 93.036 1.00 41.11 C
ATOM 18 C6 A B 620 46.698 115.124 92.120 1.00 43.41 C
ATOM 19 N6 A B 620 45.395 115.108 92.418 1.00 45.89 N
ATOM 20 N1 A B 620 47.081 114.783 90.872 1.00 42.62 N
ATOM 21 C2 A B 620 48.385 114.807 90.575 1.00 41.46 C
ATOM 22 N3 A B 620 49.421 115.117 91.349 1.00 40.54 N
ATOM 23 C4 A B 620 49.008 115.440 92.582 1.00 38.88 C
ATOM 24 P C B 621 52.441 120.465 92.764 1.00 39.35 P
ATOM 25 OP1 C B 621 53.622 121.350 92.699 1.00 40.56 O
ATOM 26 OP2 C B 621 51.180 120.987 93.312 1.00 42.38 O
ATOM 27 O5' C B 621 52.129 119.904 91.318 1.00 38.56 O
TER

Atoms:
OP1: (46.064,121.519,99.008)
OP2: (47.249,120.922,96.812)
C3': (50.196,118.962,99.629)
C1': (50.600,120.392,101.486)
C5': (49.751,121.082,98.278)
O4': (51.014,121.081,100.325)
C8: (48.832,122.094,102.165)
O2': (49.684,118.172,101.881)
C6: (49.988,123.576,105.131)
C5: (49.657,122.889,103.957)
C4: (50.525,121.889,103.544)
P: (47.135,120.793,98.289)
C4': (50.708,120.303,99.139)
C2': (49.645,119.294,101.016)
C2: (51.855,122.227,105.254)
N1: (51.115,123.212,105.771)
N3: (51.654,121.508,104.159)
N6: (49.258,124.564,105.643)
N7: (48.588,123.005,103.082)
N9: (50.003,121.397,102.368)
O5': (48.504,121.251,98.961)
O3': (51.283,118.062,99.713)
OP1: (50.102,116.625,98.013)
OP2: (52.114,115.772,99.320)
C3': (51.827,118.177,93.857)
C1': (51.243,115.894,93.694)
C5': (51.796,118.151,96.402)
O4': (51.605,116.156,95.038)
C8: (48.908,116.045,94.683)
O2': (53.087,116.694,92.369)
C6: (46.698,115.124,92.120)
C5: (47.702,115.475,93.036)
C4: (49.008,115.440,92.582)
P: (51.412,116.875,98.651)
C4': (52.221,117.463,95.132)
C2': (51.801,117.040,92.844)
C2: (48.385,114.807,90.575)
N1: (47.081,114.783,90.872)
N3: (49.421,115.117,91.349)
N6: (45.395,115.108,92.418)
N7: (47.654,115.867,94.365)
N9: (49.785,115.798,93.652)
O5': (52.352,117.472,97.530)
O3': (52.823,119.147,93.571)
Image (generated by PyMOL):
PyMOL image
show in jmol