Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZCI:B8:B9
Extra
PDB:
ATOM 1 O3' A A 7 -6.537 -4.345 -39.684 1.00 40.37 O
ATOM 2 P A A 8 -5.372 -3.725 -38.794 1.00 42.83 P
ATOM 3 OP1 A A 8 -5.488 -4.493 -37.458 1.00 45.90 O
ATOM 4 OP2 A A 8 -5.249 -2.211 -38.805 1.00 43.19 O
ATOM 5 O5' A A 8 -4.088 -4.105 -39.603 1.00 42.09 O
ATOM 6 C5' A A 8 -3.951 -5.375 -40.245 1.00 39.32 C
ATOM 7 C4' A A 8 -2.732 -5.311 -41.114 1.00 37.87 C
ATOM 8 O4' A A 8 -3.060 -4.518 -42.275 1.00 37.36 O
ATOM 9 C3' A A 8 -1.561 -4.580 -40.434 1.00 37.58 C
ATOM 10 O3' A A 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 11 C2' A A 8 -1.631 -3.193 -40.992 1.00 37.57 C
ATOM 12 O2' A A 8 -0.387 -2.498 -40.982 1.00 38.25 O
ATOM 13 C1' A A 8 -2.124 -3.493 -42.402 1.00 38.40 C
ATOM 14 N9 A A 8 -2.773 -2.313 -42.952 1.00 38.58 N
ATOM 15 C8 A A 8 -3.438 -1.314 -42.263 1.00 38.51 C
ATOM 16 N7 A A 8 -3.799 -0.307 -43.032 1.00 38.63 N
ATOM 17 C5 A A 8 -3.389 -0.699 -44.315 1.00 37.36 C
ATOM 18 C6 A A 8 -3.516 -0.079 -45.568 1.00 36.34 C
ATOM 19 N6 A A 8 -4.091 1.103 -45.733 1.00 36.50 N
ATOM 20 N1 A A 8 -3.034 -0.728 -46.657 1.00 36.85 N
ATOM 21 C2 A A 8 -2.470 -1.920 -46.461 1.00 35.29 C
ATOM 22 N3 A A 8 -2.299 -2.598 -45.343 1.00 36.79 N
ATOM 23 C4 A A 8 -2.782 -1.923 -44.287 1.00 37.04 C
ATOM 24 P G A 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 25 OP1 G A 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 26 OP2 G A 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 27 O5' G A 9 0.042 -6.621 -38.913 1.00 34.94 O
TER
ATOM 1 O3' A B 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 2 P G B 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 3 OP1 G B 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 4 OP2 G B 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 5 O5' G B 9 0.042 -6.621 -38.913 1.00 34.94 O
ATOM 6 C5' G B 9 -0.082 -7.941 -39.424 1.00 34.49 C
ATOM 7 C4' G B 9 -0.049 -8.944 -38.293 1.00 34.95 C
ATOM 8 O4' G B 9 1.291 -8.946 -37.760 1.00 34.43 O
ATOM 9 C3' G B 9 -0.931 -8.685 -37.048 1.00 35.11 C
ATOM 10 O3' G B 9 -2.232 -9.187 -37.215 1.00 35.28 O
ATOM 11 C2' G B 9 -0.207 -9.463 -35.975 1.00 34.06 C
ATOM 12 O2' G B 9 -0.388 -10.869 -36.049 1.00 35.12 O
ATOM 13 C1' G B 9 1.248 -9.157 -36.338 1.00 33.69 C
ATOM 14 N9 G B 9 1.710 -7.926 -35.707 1.00 32.24 N
ATOM 15 C8 G B 9 2.110 -6.775 -36.329 1.00 31.43 C
ATOM 16 N7 G B 9 2.605 -5.902 -35.503 1.00 31.03 N
ATOM 17 C5 G B 9 2.495 -6.506 -34.262 1.00 29.92 C
ATOM 18 C6 G B 9 2.898 -6.038 -32.999 1.00 28.19 C
ATOM 19 O6 G B 9 3.431 -4.956 -32.713 1.00 26.34 O
ATOM 20 N1 G B 9 2.628 -6.962 -32.024 1.00 26.55 N
ATOM 21 C2 G B 9 1.998 -8.154 -32.223 1.00 29.07 C
ATOM 22 N2 G B 9 1.784 -8.914 -31.130 1.00 29.83 N
ATOM 23 N3 G B 9 1.594 -8.590 -33.422 1.00 29.51 N
ATOM 24 C4 G B 9 1.893 -7.727 -34.369 1.00 30.08 C
ATOM 25 P U B 10 -3.500 -8.341 -36.675 1.00 37.34 P
ATOM 26 OP1 U B 10 -4.743 -8.902 -37.268 1.00 36.03 O
ATOM 27 OP2 U B 10 -3.225 -6.882 -36.784 1.00 36.56 O
ATOM 28 O5' U B 10 -3.460 -8.709 -35.130 1.00 36.80 O
TER
ATOM 2 P A A 8 -5.372 -3.725 -38.794 1.00 42.83 P
ATOM 3 OP1 A A 8 -5.488 -4.493 -37.458 1.00 45.90 O
ATOM 4 OP2 A A 8 -5.249 -2.211 -38.805 1.00 43.19 O
ATOM 5 O5' A A 8 -4.088 -4.105 -39.603 1.00 42.09 O
ATOM 6 C5' A A 8 -3.951 -5.375 -40.245 1.00 39.32 C
ATOM 7 C4' A A 8 -2.732 -5.311 -41.114 1.00 37.87 C
ATOM 8 O4' A A 8 -3.060 -4.518 -42.275 1.00 37.36 O
ATOM 9 C3' A A 8 -1.561 -4.580 -40.434 1.00 37.58 C
ATOM 10 O3' A A 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 11 C2' A A 8 -1.631 -3.193 -40.992 1.00 37.57 C
ATOM 12 O2' A A 8 -0.387 -2.498 -40.982 1.00 38.25 O
ATOM 13 C1' A A 8 -2.124 -3.493 -42.402 1.00 38.40 C
ATOM 14 N9 A A 8 -2.773 -2.313 -42.952 1.00 38.58 N
ATOM 15 C8 A A 8 -3.438 -1.314 -42.263 1.00 38.51 C
ATOM 16 N7 A A 8 -3.799 -0.307 -43.032 1.00 38.63 N
ATOM 17 C5 A A 8 -3.389 -0.699 -44.315 1.00 37.36 C
ATOM 18 C6 A A 8 -3.516 -0.079 -45.568 1.00 36.34 C
ATOM 19 N6 A A 8 -4.091 1.103 -45.733 1.00 36.50 N
ATOM 20 N1 A A 8 -3.034 -0.728 -46.657 1.00 36.85 N
ATOM 21 C2 A A 8 -2.470 -1.920 -46.461 1.00 35.29 C
ATOM 22 N3 A A 8 -2.299 -2.598 -45.343 1.00 36.79 N
ATOM 23 C4 A A 8 -2.782 -1.923 -44.287 1.00 37.04 C
ATOM 24 P G A 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 25 OP1 G A 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 26 OP2 G A 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 27 O5' G A 9 0.042 -6.621 -38.913 1.00 34.94 O
TER
ATOM 1 O3' A B 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 2 P G B 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 3 OP1 G B 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 4 OP2 G B 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 5 O5' G B 9 0.042 -6.621 -38.913 1.00 34.94 O
ATOM 6 C5' G B 9 -0.082 -7.941 -39.424 1.00 34.49 C
ATOM 7 C4' G B 9 -0.049 -8.944 -38.293 1.00 34.95 C
ATOM 8 O4' G B 9 1.291 -8.946 -37.760 1.00 34.43 O
ATOM 9 C3' G B 9 -0.931 -8.685 -37.048 1.00 35.11 C
ATOM 10 O3' G B 9 -2.232 -9.187 -37.215 1.00 35.28 O
ATOM 11 C2' G B 9 -0.207 -9.463 -35.975 1.00 34.06 C
ATOM 12 O2' G B 9 -0.388 -10.869 -36.049 1.00 35.12 O
ATOM 13 C1' G B 9 1.248 -9.157 -36.338 1.00 33.69 C
ATOM 14 N9 G B 9 1.710 -7.926 -35.707 1.00 32.24 N
ATOM 15 C8 G B 9 2.110 -6.775 -36.329 1.00 31.43 C
ATOM 16 N7 G B 9 2.605 -5.902 -35.503 1.00 31.03 N
ATOM 17 C5 G B 9 2.495 -6.506 -34.262 1.00 29.92 C
ATOM 18 C6 G B 9 2.898 -6.038 -32.999 1.00 28.19 C
ATOM 19 O6 G B 9 3.431 -4.956 -32.713 1.00 26.34 O
ATOM 20 N1 G B 9 2.628 -6.962 -32.024 1.00 26.55 N
ATOM 21 C2 G B 9 1.998 -8.154 -32.223 1.00 29.07 C
ATOM 22 N2 G B 9 1.784 -8.914 -31.130 1.00 29.83 N
ATOM 23 N3 G B 9 1.594 -8.590 -33.422 1.00 29.51 N
ATOM 24 C4 G B 9 1.893 -7.727 -34.369 1.00 30.08 C
ATOM 25 P U B 10 -3.500 -8.341 -36.675 1.00 37.34 P
ATOM 26 OP1 U B 10 -4.743 -8.902 -37.268 1.00 36.03 O
ATOM 27 OP2 U B 10 -3.225 -6.882 -36.784 1.00 36.56 O
ATOM 28 O5' U B 10 -3.460 -8.709 -35.130 1.00 36.80 O
TER
Atoms:
OP1: (-5.488,-4.493,-37.458)
OP2: (-5.249,-2.211,-38.805)
C3': (-1.561,-4.580,-40.434)
C1': (-2.124,-3.493,-42.402)
C5': (-3.951,-5.375,-40.245)
O4': (-3.060,-4.518,-42.275)
C8: (-3.438,-1.314,-42.263)
O2': (-0.387,-2.498,-40.982)
C6: (-3.516,-0.079,-45.568)
C5: (-3.389,-0.699,-44.315)
C4: (-2.782,-1.923,-44.287)
P: (-5.372,-3.725,-38.794)
C4': (-2.732,-5.311,-41.114)
C2': (-1.631,-3.193,-40.992)
C2: (-2.470,-1.920,-46.461)
N1: (-3.034,-0.728,-46.657)
N3: (-2.299,-2.598,-45.343)
N6: (-4.091,1.103,-45.733)
N7: (-3.799,-0.307,-43.032)
N9: (-2.773,-2.313,-42.952)
O5': (-4.088,-4.105,-39.603)
O3': (-0.299,-5.032,-40.840)
OP2: (-5.249,-2.211,-38.805)
C3': (-1.561,-4.580,-40.434)
C1': (-2.124,-3.493,-42.402)
C5': (-3.951,-5.375,-40.245)
O4': (-3.060,-4.518,-42.275)
C8: (-3.438,-1.314,-42.263)
O2': (-0.387,-2.498,-40.982)
C6: (-3.516,-0.079,-45.568)
C5: (-3.389,-0.699,-44.315)
C4: (-2.782,-1.923,-44.287)
P: (-5.372,-3.725,-38.794)
C4': (-2.732,-5.311,-41.114)
C2': (-1.631,-3.193,-40.992)
C2: (-2.470,-1.920,-46.461)
N1: (-3.034,-0.728,-46.657)
N3: (-2.299,-2.598,-45.343)
N6: (-4.091,1.103,-45.733)
N7: (-3.799,-0.307,-43.032)
N9: (-2.773,-2.313,-42.952)
O5': (-4.088,-4.105,-39.603)
O3': (-0.299,-5.032,-40.840)
OP1: (0.757,-4.305,-38.722)
OP2: (1.962,-5.829,-40.346)
C3': (-0.931,-8.685,-37.048)
C1': (1.248,-9.157,-36.338)
C5': (-0.082,-7.941,-39.424)
O6: (3.431,-4.956,-32.713)
O4': (1.291,-8.946,-37.760)
C8: (2.110,-6.775,-36.329)
C2: (1.998,-8.154,-32.223)
C6: (2.898,-6.038,-32.999)
C5: (2.495,-6.506,-34.262)
C4: (1.893,-7.727,-34.369)
P: (0.728,-5.435,-39.694)
C4': (-0.049,-8.944,-38.293)
C2': (-0.207,-9.463,-35.975)
O2': (-0.388,-10.869,-36.049)
N1: (2.628,-6.962,-32.024)
N2: (1.784,-8.914,-31.130)
N3: (1.594,-8.590,-33.422)
N7: (2.605,-5.902,-35.503)
N9: (1.710,-7.926,-35.707)
O5': (0.042,-6.621,-38.913)
O3': (-2.232,-9.187,-37.215)
OP2: (1.962,-5.829,-40.346)
C3': (-0.931,-8.685,-37.048)
C1': (1.248,-9.157,-36.338)
C5': (-0.082,-7.941,-39.424)
O6: (3.431,-4.956,-32.713)
O4': (1.291,-8.946,-37.760)
C8: (2.110,-6.775,-36.329)
C2: (1.998,-8.154,-32.223)
C6: (2.898,-6.038,-32.999)
C5: (2.495,-6.506,-34.262)
C4: (1.893,-7.727,-34.369)
P: (0.728,-5.435,-39.694)
C4': (-0.049,-8.944,-38.293)
C2': (-0.207,-9.463,-35.975)
O2': (-0.388,-10.869,-36.049)
N1: (2.628,-6.962,-32.024)
N2: (1.784,-8.914,-31.130)
N3: (1.594,-8.590,-33.422)
N7: (2.605,-5.902,-35.503)
N9: (1.710,-7.926,-35.707)
O5': (0.042,-6.621,-38.913)
O3': (-2.232,-9.187,-37.215)
Image (generated by PyMOL):