Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZCI:A8:A9
Extra
PDB:
ATOM 1 O3' A A 7 3.696 4.480 -39.678 1.00 39.82 O
ATOM 2 P A A 8 2.509 3.880 -38.789 1.00 42.22 P
ATOM 3 OP1 A A 8 2.430 4.658 -37.522 1.00 44.22 O
ATOM 4 OP2 A A 8 2.637 2.394 -38.739 1.00 42.53 O
ATOM 5 O5' A A 8 1.236 4.223 -39.667 1.00 42.46 O
ATOM 6 C5' A A 8 1.100 5.521 -40.260 1.00 40.31 C
ATOM 7 C4' A A 8 -0.123 5.547 -41.125 1.00 38.59 C
ATOM 8 O4' A A 8 0.133 4.770 -42.329 1.00 38.75 O
ATOM 9 C3' A A 8 -1.313 4.892 -40.440 1.00 37.67 C
ATOM 10 O3' A A 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 11 C2' A A 8 -1.264 3.472 -40.976 1.00 37.66 C
ATOM 12 O2' A A 8 -2.516 2.826 -40.945 1.00 38.22 O
ATOM 13 C1' A A 8 -0.794 3.709 -42.408 1.00 38.46 C
ATOM 14 N9 A A 8 -0.127 2.532 -42.957 1.00 39.45 N
ATOM 15 C8 A A 8 0.626 1.607 -42.272 1.00 39.69 C
ATOM 16 N7 A A 8 1.041 0.611 -43.014 1.00 40.07 N
ATOM 17 C5 A A 8 0.542 0.905 -44.275 1.00 39.60 C
ATOM 18 C6 A A 8 0.624 0.231 -45.503 1.00 38.48 C
ATOM 19 N6 A A 8 1.244 -0.939 -45.660 1.00 38.93 N
ATOM 20 N1 A A 8 0.034 0.800 -46.575 1.00 38.99 N
ATOM 21 C2 A A 8 -0.606 1.962 -46.409 1.00 38.00 C
ATOM 22 N3 A A 8 -0.767 2.686 -45.303 1.00 40.27 N
ATOM 23 C4 A A 8 -0.162 2.095 -44.258 1.00 39.06 C
ATOM 24 P G A 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 25 OP1 G A 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 26 OP2 G A 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 27 O5' G A 9 -3.186 6.879 -38.830 1.00 34.02 O
TER
ATOM 1 O3' A B 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 2 P G B 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 3 OP1 G B 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 4 OP2 G B 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 5 O5' G B 9 -3.186 6.879 -38.830 1.00 34.02 O
ATOM 6 C5' G B 9 -2.874 8.150 -39.419 1.00 33.54 C
ATOM 7 C4' G B 9 -2.910 9.222 -38.360 1.00 34.71 C
ATOM 8 O4' G B 9 -4.241 9.254 -37.786 1.00 33.97 O
ATOM 9 C3' G B 9 -2.000 8.968 -37.168 1.00 34.43 C
ATOM 10 O3' G B 9 -0.688 9.434 -37.412 1.00 36.06 O
ATOM 11 C2' G B 9 -2.689 9.750 -36.063 1.00 34.46 C
ATOM 12 O2' G B 9 -2.456 11.144 -36.160 1.00 35.76 O
ATOM 13 C1' G B 9 -4.155 9.463 -36.384 1.00 32.19 C
ATOM 14 N9 G B 9 -4.665 8.260 -35.728 1.00 30.88 N
ATOM 15 C8 G B 9 -5.080 7.104 -36.341 1.00 28.46 C
ATOM 16 N7 G B 9 -5.542 6.215 -35.501 1.00 27.88 N
ATOM 17 C5 G B 9 -5.407 6.813 -34.258 1.00 27.02 C
ATOM 18 C6 G B 9 -5.750 6.330 -32.962 1.00 24.97 C
ATOM 19 O6 G B 9 -6.265 5.242 -32.653 1.00 25.27 O
ATOM 20 N1 G B 9 -5.442 7.260 -31.978 1.00 25.31 N
ATOM 21 C2 G B 9 -4.882 8.496 -32.203 1.00 26.76 C
ATOM 22 N2 G B 9 -4.664 9.249 -31.118 1.00 29.45 N
ATOM 23 N3 G B 9 -4.562 8.959 -33.406 1.00 30.06 N
ATOM 24 C4 G B 9 -4.852 8.073 -34.377 1.00 28.02 C
ATOM 25 P U B 10 0.567 8.631 -36.816 1.00 37.93 P
ATOM 26 OP1 U B 10 1.789 9.236 -37.398 1.00 36.94 O
ATOM 27 OP2 U B 10 0.318 7.177 -36.983 1.00 37.42 O
ATOM 28 O5' U B 10 0.529 8.936 -35.253 1.00 37.35 O
TER
ATOM 2 P A A 8 2.509 3.880 -38.789 1.00 42.22 P
ATOM 3 OP1 A A 8 2.430 4.658 -37.522 1.00 44.22 O
ATOM 4 OP2 A A 8 2.637 2.394 -38.739 1.00 42.53 O
ATOM 5 O5' A A 8 1.236 4.223 -39.667 1.00 42.46 O
ATOM 6 C5' A A 8 1.100 5.521 -40.260 1.00 40.31 C
ATOM 7 C4' A A 8 -0.123 5.547 -41.125 1.00 38.59 C
ATOM 8 O4' A A 8 0.133 4.770 -42.329 1.00 38.75 O
ATOM 9 C3' A A 8 -1.313 4.892 -40.440 1.00 37.67 C
ATOM 10 O3' A A 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 11 C2' A A 8 -1.264 3.472 -40.976 1.00 37.66 C
ATOM 12 O2' A A 8 -2.516 2.826 -40.945 1.00 38.22 O
ATOM 13 C1' A A 8 -0.794 3.709 -42.408 1.00 38.46 C
ATOM 14 N9 A A 8 -0.127 2.532 -42.957 1.00 39.45 N
ATOM 15 C8 A A 8 0.626 1.607 -42.272 1.00 39.69 C
ATOM 16 N7 A A 8 1.041 0.611 -43.014 1.00 40.07 N
ATOM 17 C5 A A 8 0.542 0.905 -44.275 1.00 39.60 C
ATOM 18 C6 A A 8 0.624 0.231 -45.503 1.00 38.48 C
ATOM 19 N6 A A 8 1.244 -0.939 -45.660 1.00 38.93 N
ATOM 20 N1 A A 8 0.034 0.800 -46.575 1.00 38.99 N
ATOM 21 C2 A A 8 -0.606 1.962 -46.409 1.00 38.00 C
ATOM 22 N3 A A 8 -0.767 2.686 -45.303 1.00 40.27 N
ATOM 23 C4 A A 8 -0.162 2.095 -44.258 1.00 39.06 C
ATOM 24 P G A 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 25 OP1 G A 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 26 OP2 G A 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 27 O5' G A 9 -3.186 6.879 -38.830 1.00 34.02 O
TER
ATOM 1 O3' A B 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 2 P G B 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 3 OP1 G B 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 4 OP2 G B 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 5 O5' G B 9 -3.186 6.879 -38.830 1.00 34.02 O
ATOM 6 C5' G B 9 -2.874 8.150 -39.419 1.00 33.54 C
ATOM 7 C4' G B 9 -2.910 9.222 -38.360 1.00 34.71 C
ATOM 8 O4' G B 9 -4.241 9.254 -37.786 1.00 33.97 O
ATOM 9 C3' G B 9 -2.000 8.968 -37.168 1.00 34.43 C
ATOM 10 O3' G B 9 -0.688 9.434 -37.412 1.00 36.06 O
ATOM 11 C2' G B 9 -2.689 9.750 -36.063 1.00 34.46 C
ATOM 12 O2' G B 9 -2.456 11.144 -36.160 1.00 35.76 O
ATOM 13 C1' G B 9 -4.155 9.463 -36.384 1.00 32.19 C
ATOM 14 N9 G B 9 -4.665 8.260 -35.728 1.00 30.88 N
ATOM 15 C8 G B 9 -5.080 7.104 -36.341 1.00 28.46 C
ATOM 16 N7 G B 9 -5.542 6.215 -35.501 1.00 27.88 N
ATOM 17 C5 G B 9 -5.407 6.813 -34.258 1.00 27.02 C
ATOM 18 C6 G B 9 -5.750 6.330 -32.962 1.00 24.97 C
ATOM 19 O6 G B 9 -6.265 5.242 -32.653 1.00 25.27 O
ATOM 20 N1 G B 9 -5.442 7.260 -31.978 1.00 25.31 N
ATOM 21 C2 G B 9 -4.882 8.496 -32.203 1.00 26.76 C
ATOM 22 N2 G B 9 -4.664 9.249 -31.118 1.00 29.45 N
ATOM 23 N3 G B 9 -4.562 8.959 -33.406 1.00 30.06 N
ATOM 24 C4 G B 9 -4.852 8.073 -34.377 1.00 28.02 C
ATOM 25 P U B 10 0.567 8.631 -36.816 1.00 37.93 P
ATOM 26 OP1 U B 10 1.789 9.236 -37.398 1.00 36.94 O
ATOM 27 OP2 U B 10 0.318 7.177 -36.983 1.00 37.42 O
ATOM 28 O5' U B 10 0.529 8.936 -35.253 1.00 37.35 O
TER
Atoms:
OP1: (2.430,4.658,-37.522)
OP2: (2.637,2.394,-38.739)
C3': (-1.313,4.892,-40.440)
C1': (-0.794,3.709,-42.408)
C5': (1.100,5.521,-40.260)
O4': (0.133,4.770,-42.329)
C8: (0.626,1.607,-42.272)
O2': (-2.516,2.826,-40.945)
C6: (0.624,0.231,-45.503)
C5: (0.542,0.905,-44.275)
C4: (-0.162,2.095,-44.258)
P: (2.509,3.880,-38.789)
C4': (-0.123,5.547,-41.125)
C2': (-1.264,3.472,-40.976)
C2: (-0.606,1.962,-46.409)
N1: (0.034,0.800,-46.575)
N3: (-0.767,2.686,-45.303)
N6: (1.244,-0.939,-45.660)
N7: (1.041,0.611,-43.014)
N9: (-0.127,2.532,-42.957)
O5': (1.236,4.223,-39.667)
O3': (-2.535,5.493,-40.812)
OP2: (2.637,2.394,-38.739)
C3': (-1.313,4.892,-40.440)
C1': (-0.794,3.709,-42.408)
C5': (1.100,5.521,-40.260)
O4': (0.133,4.770,-42.329)
C8: (0.626,1.607,-42.272)
O2': (-2.516,2.826,-40.945)
C6: (0.624,0.231,-45.503)
C5: (0.542,0.905,-44.275)
C4: (-0.162,2.095,-44.258)
P: (2.509,3.880,-38.789)
C4': (-0.123,5.547,-41.125)
C2': (-1.264,3.472,-40.976)
C2: (-0.606,1.962,-46.409)
N1: (0.034,0.800,-46.575)
N3: (-0.767,2.686,-45.303)
N6: (1.244,-0.939,-45.660)
N7: (1.041,0.611,-43.014)
N9: (-0.127,2.532,-42.957)
O5': (1.236,4.223,-39.667)
O3': (-2.535,5.493,-40.812)
OP1: (-3.669,4.434,-38.856)
OP2: (-4.941,6.031,-40.423)
C3': (-2.000,8.968,-37.168)
C1': (-4.155,9.463,-36.384)
C5': (-2.874,8.150,-39.419)
O6: (-6.265,5.242,-32.653)
O4': (-4.241,9.254,-37.786)
C8: (-5.080,7.104,-36.341)
C2: (-4.882,8.496,-32.203)
C6: (-5.750,6.330,-32.962)
C5: (-5.407,6.813,-34.258)
C4: (-4.852,8.073,-34.377)
P: (-3.687,5.655,-39.711)
C4': (-2.910,9.222,-38.360)
C2': (-2.689,9.750,-36.063)
O2': (-2.456,11.144,-36.160)
N1: (-5.442,7.260,-31.978)
N2: (-4.664,9.249,-31.118)
N3: (-4.562,8.959,-33.406)
N7: (-5.542,6.215,-35.501)
N9: (-4.665,8.260,-35.728)
O5': (-3.186,6.879,-38.830)
O3': (-0.688,9.434,-37.412)
OP2: (-4.941,6.031,-40.423)
C3': (-2.000,8.968,-37.168)
C1': (-4.155,9.463,-36.384)
C5': (-2.874,8.150,-39.419)
O6: (-6.265,5.242,-32.653)
O4': (-4.241,9.254,-37.786)
C8: (-5.080,7.104,-36.341)
C2: (-4.882,8.496,-32.203)
C6: (-5.750,6.330,-32.962)
C5: (-5.407,6.813,-34.258)
C4: (-4.852,8.073,-34.377)
P: (-3.687,5.655,-39.711)
C4': (-2.910,9.222,-38.360)
C2': (-2.689,9.750,-36.063)
O2': (-2.456,11.144,-36.160)
N1: (-5.442,7.260,-31.978)
N2: (-4.664,9.249,-31.118)
N3: (-4.562,8.959,-33.406)
N7: (-5.542,6.215,-35.501)
N9: (-4.665,8.260,-35.728)
O5': (-3.186,6.879,-38.830)
O3': (-0.688,9.434,-37.412)
Image (generated by PyMOL):