ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUT:R41:R42

Extra

PDB:
ATOM 1 O3' A A 40 -10.955 -1.939 8.104 1.00 57.87 O
ATOM 2 P A A 41 -10.781 -0.921 6.869 1.00 59.05 P
ATOM 3 OP1 A A 41 -10.771 0.453 7.422 1.00 59.84 O
ATOM 4 OP2 A A 41 -11.734 -1.285 5.788 1.00 59.00 O
ATOM 5 O5' A A 41 -9.305 -1.222 6.351 1.00 55.86 O
ATOM 6 C5' A A 41 -9.073 -2.318 5.471 1.00 54.27 C
ATOM 7 C4' A A 41 -7.591 -2.482 5.180 1.00 50.68 C
ATOM 8 O4' A A 41 -7.154 -1.425 4.297 1.00 49.46 O
ATOM 9 C3' A A 41 -6.662 -2.416 6.387 1.00 48.48 C
ATOM 10 O3' A A 41 -5.530 -3.251 6.150 1.00 47.41 O
ATOM 11 C2' A A 41 -6.307 -0.933 6.474 1.00 48.20 C
ATOM 12 O2' A A 41 -5.015 -0.707 6.994 1.00 49.74 O
ATOM 13 C1' A A 41 -6.352 -0.505 5.012 1.00 48.06 C
ATOM 14 N9 A A 41 -6.916 0.811 4.761 1.00 46.67 N
ATOM 15 C8 A A 41 -8.174 1.076 4.316 1.00 49.24 C
ATOM 16 N7 A A 41 -8.420 2.353 4.147 1.00 51.18 N
ATOM 17 C5 A A 41 -7.237 2.965 4.501 1.00 48.10 C
ATOM 18 C6 A A 41 -6.851 4.315 4.536 1.00 46.93 C
ATOM 19 N6 A A 41 -7.663 5.316 4.205 1.00 46.60 N
ATOM 20 N1 A A 41 -5.595 4.594 4.934 1.00 48.01 N
ATOM 21 C2 A A 41 -4.779 3.586 5.275 1.00 48.83 C
ATOM 22 N3 A A 41 -5.032 2.275 5.284 1.00 48.80 N
ATOM 23 C4 A A 41 -6.292 2.029 4.879 1.00 47.69 C
ATOM 24 P G A 42 -5.431 -4.689 6.852 1.00 48.49 P
ATOM 25 OP1 G A 42 -5.346 -4.460 8.307 1.00 51.51 O
ATOM 26 OP2 G A 42 -4.352 -5.455 6.193 1.00 48.08 O
ATOM 27 O5' G A 42 -6.858 -5.372 6.585 1.00 48.02 O
TER

ATOM 1 O3' A B 41 -5.530 -3.251 6.150 1.00 47.41 O
ATOM 2 P G B 42 -5.431 -4.689 6.852 1.00 48.49 P
ATOM 3 OP1 G B 42 -5.346 -4.460 8.307 1.00 51.51 O
ATOM 4 OP2 G B 42 -4.352 -5.455 6.193 1.00 48.08 O
ATOM 5 O5' G B 42 -6.858 -5.372 6.585 1.00 48.02 O
ATOM 6 C5' G B 42 -7.168 -6.073 5.381 1.00 48.32 C
ATOM 7 C4' G B 42 -7.309 -7.558 5.666 1.00 50.12 C
ATOM 8 O4' G B 42 -8.319 -7.793 6.687 1.00 51.66 O
ATOM 9 C3' G B 42 -7.738 -8.430 4.493 1.00 49.68 C
ATOM 10 O3' G B 42 -6.607 -8.768 3.689 1.00 47.88 O
ATOM 11 C2' G B 42 -8.299 -9.640 5.238 1.00 50.99 C
ATOM 12 O2' G B 42 -7.293 -10.487 5.762 1.00 51.46 O
ATOM 13 C1' G B 42 -9.040 -8.978 6.396 1.00 50.92 C
ATOM 14 N9 G B 42 -10.427 -8.619 6.100 1.00 49.92 N
ATOM 15 C8 G B 42 -10.960 -7.355 6.115 1.00 49.09 C
ATOM 16 N7 G B 42 -12.223 -7.308 5.813 1.00 48.90 N
ATOM 17 C5 G B 42 -12.549 -8.628 5.584 1.00 50.08 C
ATOM 18 C6 G B 42 -13.786 -9.185 5.215 1.00 52.81 C
ATOM 19 O6 G B 42 -14.845 -8.588 5.024 1.00 55.08 O
ATOM 20 N1 G B 42 -13.721 -10.563 5.066 1.00 54.27 N
ATOM 21 C2 G B 42 -12.581 -11.305 5.256 1.00 55.46 C
ATOM 22 N2 G B 42 -12.700 -12.627 5.078 1.00 59.64 N
ATOM 23 N3 G B 42 -11.407 -10.792 5.608 1.00 52.73 N
ATOM 24 C4 G B 42 -11.463 -9.449 5.752 1.00 50.25 C
ATOM 25 P C B 43 -6.428 -8.199 2.201 1.00 46.78 P
ATOM 26 OP1 C B 43 -5.089 -8.614 1.730 1.00 45.70 O
ATOM 27 OP2 C B 43 -6.778 -6.765 2.198 1.00 46.93 O
ATOM 28 O5' C B 43 -7.549 -8.986 1.370 1.00 48.15 O
TER

Atoms:
OP1: (-10.771,0.453,7.422)
OP2: (-11.734,-1.285,5.788)
C3': (-6.662,-2.416,6.387)
C1': (-6.352,-0.505,5.012)
C5': (-9.073,-2.318,5.471)
O4': (-7.154,-1.425,4.297)
C8: (-8.174,1.076,4.316)
O2': (-5.015,-0.707,6.994)
C6: (-6.851,4.315,4.536)
C5: (-7.237,2.965,4.501)
C4: (-6.292,2.029,4.879)
P: (-10.781,-0.921,6.869)
C4': (-7.591,-2.482,5.180)
C2': (-6.307,-0.933,6.474)
C2: (-4.779,3.586,5.275)
N1: (-5.595,4.594,4.934)
N3: (-5.032,2.275,5.284)
N6: (-7.663,5.316,4.205)
N7: (-8.420,2.353,4.147)
N9: (-6.916,0.811,4.761)
O5': (-9.305,-1.222,6.351)
O3': (-5.530,-3.251,6.150)
OP1: (-5.346,-4.460,8.307)
OP2: (-4.352,-5.455,6.193)
C3': (-7.738,-8.430,4.493)
C1': (-9.040,-8.978,6.396)
C5': (-7.168,-6.073,5.381)
O6: (-14.845,-8.588,5.024)
O4': (-8.319,-7.793,6.687)
C8: (-10.960,-7.355,6.115)
C2: (-12.581,-11.305,5.256)
C6: (-13.786,-9.185,5.215)
C5: (-12.549,-8.628,5.584)
C4: (-11.463,-9.449,5.752)
P: (-5.431,-4.689,6.852)
C4': (-7.309,-7.558,5.666)
C2': (-8.299,-9.640,5.238)
O2': (-7.293,-10.487,5.762)
N1: (-13.721,-10.563,5.066)
N2: (-12.700,-12.627,5.078)
N3: (-11.407,-10.792,5.608)
N7: (-12.223,-7.308,5.813)
N9: (-10.427,-8.619,6.100)
O5': (-6.858,-5.372,6.585)
O3': (-6.607,-8.768,3.689)
Image (generated by PyMOL):
PyMOL image
show in jmol