ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A573:A574

Extra

PDB:
ATOM 1 O3' U A 572 -78.218 -78.165 3.338 1.00 0.01 O
ATOM 2 P A A 573 -76.653 -77.999 3.620 1.00 0.01 P
ATOM 3 OP1 A A 573 -76.012 -79.257 3.261 1.00 0.01 O
ATOM 4 OP2 A A 573 -76.515 -77.507 4.988 1.00 0.01 O
ATOM 5 O5' A A 573 -76.237 -76.883 2.578 1.00 0.01 O
ATOM 6 C5' A A 573 -76.009 -75.544 2.981 1.00 0.01 C
ATOM 7 C4' A A 573 -76.907 -74.581 2.253 1.00 0.01 C
ATOM 8 O4' A A 573 -76.350 -74.302 0.952 1.00 0.01 O
ATOM 9 C3' A A 573 -78.310 -75.082 2.016 1.00 0.01 C
ATOM 10 O3' A A 573 -79.220 -74.011 2.081 1.00 0.01 O
ATOM 11 C2' A A 573 -78.260 -75.567 0.585 1.00 0.01 C
ATOM 12 O2' A A 573 -79.512 -75.529 -0.063 1.00 0.01 O
ATOM 13 C1' A A 573 -77.287 -74.585 -0.036 1.00 0.01 C
ATOM 14 N9 A A 573 -76.580 -75.110 -1.194 1.00 0.01 N
ATOM 15 C8 A A 573 -75.822 -76.245 -1.265 1.00 0.01 C
ATOM 16 N7 A A 573 -75.299 -76.473 -2.448 1.00 0.01 N
ATOM 17 C5 A A 573 -75.762 -75.419 -3.222 1.00 0.01 C
ATOM 18 C6 A A 573 -75.570 -75.084 -4.557 1.00 0.01 C
ATOM 19 N6 A A 573 -74.852 -75.763 -5.431 1.00 0.01 N
ATOM 20 N1 A A 573 -76.171 -73.988 -4.992 1.00 0.01 N
ATOM 21 C2 A A 573 -76.899 -73.276 -4.138 1.00 0.01 C
ATOM 22 N3 A A 573 -77.146 -73.464 -2.858 1.00 0.01 N
ATOM 23 C4 A A 573 -76.545 -74.576 -2.458 1.00 0.01 C
ATOM 24 P A A 574 -79.495 -73.254 3.431 1.00 0.01 P
ATOM 25 OP1 A A 574 -80.700 -73.825 4.025 1.00 0.01 O
ATOM 26 OP2 A A 574 -79.488 -71.854 3.101 1.00 0.01 O
ATOM 27 O5' A A 574 -78.250 -73.627 4.333 1.00 0.01 O
TER

ATOM 1 O3' A B 573 -79.220 -74.011 2.081 1.00 0.01 O
ATOM 2 P A B 574 -79.495 -73.254 3.431 1.00 0.01 P
ATOM 3 OP1 A B 574 -80.700 -73.825 4.025 1.00 0.01 O
ATOM 4 OP2 A B 574 -79.488 -71.854 3.101 1.00 0.01 O
ATOM 5 O5' A B 574 -78.250 -73.627 4.333 1.00 0.01 O
ATOM 6 C5' A B 574 -77.502 -72.626 5.024 1.00 0.01 C
ATOM 7 C4' A B 574 -78.051 -72.306 6.408 1.00 0.01 C
ATOM 8 O4' A B 574 -79.298 -73.002 6.649 1.00 0.01 O
ATOM 9 C3' A B 574 -77.199 -72.722 7.586 1.00 0.01 C
ATOM 10 O3' A B 574 -76.063 -71.902 7.785 1.00 0.01 O
ATOM 11 C2' A B 574 -78.202 -72.678 8.726 1.00 0.01 C
ATOM 12 O2' A B 574 -78.466 -71.347 9.116 1.00 0.01 O
ATOM 13 C1' A B 574 -79.448 -73.223 8.041 1.00 0.01 C
ATOM 14 N9 A B 574 -79.634 -74.668 8.292 1.00 0.01 N
ATOM 15 C8 A B 574 -79.711 -75.658 7.384 1.00 0.01 C
ATOM 16 N7 A B 574 -79.904 -76.837 7.899 1.00 0.01 N
ATOM 17 C5 A B 574 -79.960 -76.618 9.231 1.00 0.01 C
ATOM 18 C6 A B 574 -80.128 -77.477 10.290 1.00 0.01 C
ATOM 19 N6 A B 574 -80.266 -78.759 10.170 1.00 0.01 N
ATOM 20 N1 A B 574 -80.155 -77.004 11.509 1.00 0.01 N
ATOM 21 C2 A B 574 -79.996 -75.700 11.624 1.00 0.01 C
ATOM 22 N3 A B 574 -79.816 -74.773 10.689 1.00 0.01 N
ATOM 23 C4 A B 574 -79.807 -75.303 9.483 1.00 0.01 C
ATOM 24 P U B 575 -74.657 -72.579 8.105 1.00 0.01 P
ATOM 25 OP1 U B 575 -73.615 -71.643 7.746 1.00 0.01 O
ATOM 26 OP2 U B 575 -74.666 -73.881 7.476 1.00 0.01 O
ATOM 27 O5' U B 575 -74.707 -72.752 9.653 1.00 0.01 O
TER

Atoms:
OP1: (-76.012,-79.257,3.261)
OP2: (-76.515,-77.507,4.988)
C3': (-78.310,-75.082,2.016)
C1': (-77.287,-74.585,-0.036)
C5': (-76.009,-75.544,2.981)
O4': (-76.350,-74.302,0.952)
C8: (-75.822,-76.245,-1.265)
O2': (-79.512,-75.529,-0.063)
C6: (-75.570,-75.084,-4.557)
C5: (-75.762,-75.419,-3.222)
C4: (-76.545,-74.576,-2.458)
P: (-76.653,-77.999,3.620)
C4': (-76.907,-74.581,2.253)
C2': (-78.260,-75.567,0.585)
C2: (-76.899,-73.276,-4.138)
N1: (-76.171,-73.988,-4.992)
N3: (-77.146,-73.464,-2.858)
N6: (-74.852,-75.763,-5.431)
N7: (-75.299,-76.473,-2.448)
N9: (-76.580,-75.110,-1.194)
O5': (-76.237,-76.883,2.578)
O3': (-79.220,-74.011,2.081)
OP1: (-80.700,-73.825,4.025)
OP2: (-79.488,-71.854,3.101)
C3': (-77.199,-72.722,7.586)
C1': (-79.448,-73.223,8.041)
C5': (-77.502,-72.626,5.024)
O4': (-79.298,-73.002,6.649)
C8: (-79.711,-75.658,7.384)
O2': (-78.466,-71.347,9.116)
C6: (-80.128,-77.477,10.290)
C5: (-79.960,-76.618,9.231)
C4: (-79.807,-75.303,9.483)
P: (-79.495,-73.254,3.431)
C4': (-78.051,-72.306,6.408)
C2': (-78.202,-72.678,8.726)
C2: (-79.996,-75.700,11.624)
N1: (-80.155,-77.004,11.509)
N3: (-79.816,-74.773,10.689)
N6: (-80.266,-78.759,10.170)
N7: (-79.904,-76.837,7.899)
N9: (-79.634,-74.668,8.292)
O5': (-78.250,-73.627,4.333)
O3': (-76.063,-71.902,7.785)
Image (generated by PyMOL):
PyMOL image
show in jmol