ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A738:A772

Extra

PDB:
ATOM 1 O3' A A 737 72.364 14.997 -8.215 1.00 46.51 O
ATOM 2 P G A 738 71.639 13.862 -9.081 1.00 41.50 P
ATOM 3 OP1 G A 738 72.687 13.104 -9.790 1.00 44.56 O
ATOM 4 OP2 G A 738 70.574 14.535 -9.870 1.00 42.36 O
ATOM 5 O5' G A 738 71.004 12.912 -7.955 1.00 43.70 O
ATOM 6 C5' G A 738 71.842 12.154 -7.061 1.00 42.88 C
ATOM 7 C4' G A 738 71.010 11.302 -6.121 1.00 47.44 C
ATOM 8 O4' G A 738 70.297 12.150 -5.173 1.00 49.61 O
ATOM 9 C3' G A 738 69.928 10.422 -6.740 1.00 43.70 C
ATOM 10 O3' G A 738 70.405 9.167 -7.204 1.00 42.20 O
ATOM 11 C2' G A 738 68.977 10.215 -5.569 1.00 48.60 C
ATOM 12 O2' G A 738 69.474 9.233 -4.682 1.00 51.76 O
ATOM 13 C1' G A 738 69.026 11.573 -4.873 1.00 48.98 C
ATOM 14 N9 G A 738 67.978 12.456 -5.383 1.00 53.18 N
ATOM 15 C8 G A 738 68.151 13.503 -6.258 1.00 55.69 C
ATOM 16 N7 G A 738 67.043 14.119 -6.549 1.00 53.69 N
ATOM 17 C5 G A 738 66.075 13.443 -5.829 1.00 51.59 C
ATOM 18 C6 G A 738 64.682 13.664 -5.753 1.00 55.89 C
ATOM 19 O6 G A 738 63.998 14.534 -6.336 1.00 48.74 O
ATOM 20 N1 G A 738 64.072 12.751 -4.906 1.00 59.79 N
ATOM 21 C2 G A 738 64.721 11.747 -4.226 1.00 59.90 C
ATOM 22 N2 G A 738 63.944 10.966 -3.449 1.00 55.19 N
ATOM 23 N3 G A 738 66.026 11.528 -4.298 1.00 50.94 N
ATOM 24 C4 G A 738 66.634 12.408 -5.106 1.00 45.76 C
ATOM 25 P C A 739 69.524 8.317 -8.254 1.00 65.21 P
ATOM 26 OP1 C A 739 70.277 7.072 -8.568 1.00 69.14 O
ATOM 27 OP2 C A 739 69.169 9.242 -9.354 1.00 52.07 O
ATOM 28 O5' C A 739 68.178 7.929 -7.472 1.00 55.15 O
TER

ATOM 1 O3' A B 771 70.484 8.652 -14.483 1.00 51.73 O
ATOM 2 P G B 772 69.186 9.441 -15.017 1.00 55.14 P
ATOM 3 OP1 G B 772 68.024 8.813 -14.354 1.00 47.71 O
ATOM 4 OP2 G B 772 69.241 9.491 -16.508 1.00 49.88 O
ATOM 5 O5' G B 772 69.364 10.928 -14.459 1.00 39.62 O
ATOM 6 C5' G B 772 69.708 11.166 -13.094 1.00 42.32 C
ATOM 7 C4' G B 772 70.478 12.469 -12.954 1.00 52.18 C
ATOM 8 O4' G B 772 71.766 12.362 -13.611 1.00 54.76 O
ATOM 9 C3' G B 772 69.837 13.709 -13.554 1.00 53.96 C
ATOM 10 O3' G B 772 68.937 14.304 -12.632 1.00 57.61 O
ATOM 11 C2' G B 772 71.031 14.614 -13.829 1.00 51.58 C
ATOM 12 O2' G B 772 71.455 15.327 -12.687 1.00 54.98 O
ATOM 13 C1' G B 772 72.107 13.598 -14.199 1.00 49.79 C
ATOM 14 N9 G B 772 72.210 13.375 -15.630 1.00 52.76 N
ATOM 15 C8 G B 772 71.531 12.444 -16.383 1.00 56.48 C
ATOM 16 N7 G B 772 71.884 12.445 -17.638 1.00 51.58 N
ATOM 17 C5 G B 772 72.846 13.434 -17.716 1.00 52.56 C
ATOM 18 C6 G B 772 73.625 13.864 -18.809 1.00 56.05 C
ATOM 19 O6 G B 772 73.660 13.400 -19.966 1.00 57.30 O
ATOM 20 N1 G B 772 74.461 14.923 -18.452 1.00 59.81 N
ATOM 21 C2 G B 772 74.562 15.466 -17.188 1.00 59.33 C
ATOM 22 N2 G B 772 75.431 16.475 -17.031 1.00 55.73 N
ATOM 23 N3 G B 772 73.864 15.045 -16.153 1.00 59.49 N
ATOM 24 C4 G B 772 73.034 14.037 -16.487 1.00 55.46 C
ATOM 25 P U B 773 67.582 14.986 -13.164 1.00 60.51 P
ATOM 26 OP1 U B 773 66.817 15.392 -11.964 1.00 59.04 O
ATOM 27 OP2 U B 773 66.955 14.067 -14.163 1.00 56.16 O
ATOM 28 O5' U B 773 68.095 16.318 -13.872 1.00 59.34 O
TER

Atoms:
OP1: (72.687,13.104,-9.790)
OP2: (70.574,14.535,-9.870)
C3': (69.928,10.422,-6.740)
C1': (69.026,11.573,-4.873)
C5': (71.842,12.154,-7.061)
O6: (63.998,14.534,-6.336)
O4': (70.297,12.150,-5.173)
C8: (68.151,13.503,-6.258)
C2: (64.721,11.747,-4.226)
C6: (64.682,13.664,-5.753)
C5: (66.075,13.443,-5.829)
C4: (66.634,12.408,-5.106)
P: (71.639,13.862,-9.081)
C4': (71.010,11.302,-6.121)
C2': (68.977,10.215,-5.569)
O2': (69.474,9.233,-4.682)
N1: (64.072,12.751,-4.906)
N2: (63.944,10.966,-3.449)
N3: (66.026,11.528,-4.298)
N7: (67.043,14.119,-6.549)
N9: (67.978,12.456,-5.383)
O5': (71.004,12.912,-7.955)
O3': (70.405,9.167,-7.204)
OP1: (68.024,8.813,-14.354)
OP2: (69.241,9.491,-16.508)
C3': (69.837,13.709,-13.554)
C1': (72.107,13.598,-14.199)
C5': (69.708,11.166,-13.094)
O6: (73.660,13.400,-19.966)
O4': (71.766,12.362,-13.611)
C8: (71.531,12.444,-16.383)
C2: (74.562,15.466,-17.188)
C6: (73.625,13.864,-18.809)
C5: (72.846,13.434,-17.716)
C4: (73.034,14.037,-16.487)
P: (69.186,9.441,-15.017)
C4': (70.478,12.469,-12.954)
C2': (71.031,14.614,-13.829)
O2': (71.455,15.327,-12.687)
N1: (74.461,14.923,-18.452)
N2: (75.431,16.475,-17.031)
N3: (73.864,15.045,-16.153)
N7: (71.884,12.445,-17.638)
N9: (72.210,13.375,-15.630)
O5': (69.364,10.928,-14.459)
O3': (68.937,14.304,-12.632)
Image (generated by PyMOL):
PyMOL image
show in jmol