Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2962:2996
Extra
PDB:
ATOM 1 O3' A A 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 2 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G A 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G A 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G A 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G A 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G A 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G A 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G A 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G A 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G A 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G A 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G A 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G A 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G A 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G A 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G A 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G A 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G A 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G A 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G A 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U A 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U A 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U A 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U A 963 -29.487 1.383 100.610 1.00 58.85 O
TER
ATOM 1 O3' A B 995 -27.088 -5.444 103.990 1.00 63.63 O
ATOM 2 P G B 996 -27.714 -5.052 105.415 1.00 66.84 P
ATOM 3 OP1 G B 996 -27.461 -3.605 105.615 1.00 66.02 O
ATOM 4 OP2 G B 996 -27.167 -6.010 106.407 1.00 68.07 O
ATOM 5 O5' G B 996 -29.263 -5.304 105.205 1.00 66.77 O
ATOM 6 C5' G B 996 -30.044 -4.449 104.387 1.00 65.74 C
ATOM 7 C4' G B 996 -31.420 -5.024 104.146 1.00 65.93 C
ATOM 8 O4' G B 996 -31.318 -6.380 103.619 1.00 66.57 O
ATOM 9 C3' G B 996 -32.286 -5.204 105.373 1.00 66.65 C
ATOM 10 O3' G B 996 -32.847 -4.001 105.842 1.00 66.10 O
ATOM 11 C2' G B 996 -33.309 -6.209 104.887 1.00 67.05 C
ATOM 12 O2' G B 996 -34.236 -5.587 104.023 1.00 66.19 O
ATOM 13 C1' G B 996 -32.428 -7.139 104.056 1.00 67.27 C
ATOM 14 N9 G B 996 -31.954 -8.274 104.865 1.00 68.49 N
ATOM 15 C8 G B 996 -30.758 -8.478 105.494 1.00 69.02 C
ATOM 16 N7 G B 996 -30.724 -9.600 106.175 1.00 70.20 N
ATOM 17 C5 G B 996 -31.991 -10.162 106.017 1.00 70.47 C
ATOM 18 C6 G B 996 -32.585 -11.375 106.505 1.00 71.63 C
ATOM 19 O6 G B 996 -32.101 -12.258 107.227 1.00 72.72 O
ATOM 20 N1 G B 996 -33.900 -11.545 106.085 1.00 71.49 N
ATOM 21 C2 G B 996 -34.577 -10.665 105.283 1.00 70.40 C
ATOM 22 N2 G B 996 -35.847 -11.001 104.960 1.00 70.49 N
ATOM 23 N3 G B 996 -34.042 -9.532 104.832 1.00 69.33 N
ATOM 24 C4 G B 996 -32.757 -9.341 105.223 1.00 69.42 C
ATOM 25 P U B 997 -33.227 -3.849 107.396 1.00 63.06 P
ATOM 26 OP1 U B 997 -33.921 -2.539 107.551 1.00 62.32 O
ATOM 27 OP2 U B 997 -31.987 -4.117 108.190 1.00 63.71 O
ATOM 28 O5' U B 997 -34.246 -5.041 107.626 1.00 63.96 O
TER
ATOM 2 P G A 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G A 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G A 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G A 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G A 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G A 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G A 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G A 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G A 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G A 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G A 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G A 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G A 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G A 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G A 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G A 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G A 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G A 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G A 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G A 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G A 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G A 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G A 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U A 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U A 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U A 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U A 963 -29.487 1.383 100.610 1.00 58.85 O
TER
ATOM 1 O3' A B 995 -27.088 -5.444 103.990 1.00 63.63 O
ATOM 2 P G B 996 -27.714 -5.052 105.415 1.00 66.84 P
ATOM 3 OP1 G B 996 -27.461 -3.605 105.615 1.00 66.02 O
ATOM 4 OP2 G B 996 -27.167 -6.010 106.407 1.00 68.07 O
ATOM 5 O5' G B 996 -29.263 -5.304 105.205 1.00 66.77 O
ATOM 6 C5' G B 996 -30.044 -4.449 104.387 1.00 65.74 C
ATOM 7 C4' G B 996 -31.420 -5.024 104.146 1.00 65.93 C
ATOM 8 O4' G B 996 -31.318 -6.380 103.619 1.00 66.57 O
ATOM 9 C3' G B 996 -32.286 -5.204 105.373 1.00 66.65 C
ATOM 10 O3' G B 996 -32.847 -4.001 105.842 1.00 66.10 O
ATOM 11 C2' G B 996 -33.309 -6.209 104.887 1.00 67.05 C
ATOM 12 O2' G B 996 -34.236 -5.587 104.023 1.00 66.19 O
ATOM 13 C1' G B 996 -32.428 -7.139 104.056 1.00 67.27 C
ATOM 14 N9 G B 996 -31.954 -8.274 104.865 1.00 68.49 N
ATOM 15 C8 G B 996 -30.758 -8.478 105.494 1.00 69.02 C
ATOM 16 N7 G B 996 -30.724 -9.600 106.175 1.00 70.20 N
ATOM 17 C5 G B 996 -31.991 -10.162 106.017 1.00 70.47 C
ATOM 18 C6 G B 996 -32.585 -11.375 106.505 1.00 71.63 C
ATOM 19 O6 G B 996 -32.101 -12.258 107.227 1.00 72.72 O
ATOM 20 N1 G B 996 -33.900 -11.545 106.085 1.00 71.49 N
ATOM 21 C2 G B 996 -34.577 -10.665 105.283 1.00 70.40 C
ATOM 22 N2 G B 996 -35.847 -11.001 104.960 1.00 70.49 N
ATOM 23 N3 G B 996 -34.042 -9.532 104.832 1.00 69.33 N
ATOM 24 C4 G B 996 -32.757 -9.341 105.223 1.00 69.42 C
ATOM 25 P U B 997 -33.227 -3.849 107.396 1.00 63.06 P
ATOM 26 OP1 U B 997 -33.921 -2.539 107.551 1.00 62.32 O
ATOM 27 OP2 U B 997 -31.987 -4.117 108.190 1.00 63.71 O
ATOM 28 O5' U B 997 -34.246 -5.041 107.626 1.00 63.96 O
TER
Atoms:
OP1: (-33.766,-4.558,100.619)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
OP1: (-27.461,-3.605,105.615)
OP2: (-27.167,-6.010,106.407)
C3': (-32.286,-5.204,105.373)
C1': (-32.428,-7.139,104.056)
C5': (-30.044,-4.449,104.387)
O6: (-32.101,-12.258,107.227)
O4': (-31.318,-6.380,103.619)
C8: (-30.758,-8.478,105.494)
C2: (-34.577,-10.665,105.283)
C6: (-32.585,-11.375,106.505)
C5: (-31.991,-10.162,106.017)
C4: (-32.757,-9.341,105.223)
P: (-27.714,-5.052,105.415)
C4': (-31.420,-5.024,104.146)
C2': (-33.309,-6.209,104.887)
O2': (-34.236,-5.587,104.023)
N1: (-33.900,-11.545,106.085)
N2: (-35.847,-11.001,104.960)
N3: (-34.042,-9.532,104.832)
N7: (-30.724,-9.600,106.175)
N9: (-31.954,-8.274,104.865)
O5': (-29.263,-5.304,105.205)
O3': (-32.847,-4.001,105.842)
OP2: (-27.167,-6.010,106.407)
C3': (-32.286,-5.204,105.373)
C1': (-32.428,-7.139,104.056)
C5': (-30.044,-4.449,104.387)
O6: (-32.101,-12.258,107.227)
O4': (-31.318,-6.380,103.619)
C8: (-30.758,-8.478,105.494)
C2: (-34.577,-10.665,105.283)
C6: (-32.585,-11.375,106.505)
C5: (-31.991,-10.162,106.017)
C4: (-32.757,-9.341,105.223)
P: (-27.714,-5.052,105.415)
C4': (-31.420,-5.024,104.146)
C2': (-33.309,-6.209,104.887)
O2': (-34.236,-5.587,104.023)
N1: (-33.900,-11.545,106.085)
N2: (-35.847,-11.001,104.960)
N3: (-34.042,-9.532,104.832)
N7: (-30.724,-9.600,106.175)
N9: (-31.954,-8.274,104.865)
O5': (-29.263,-5.304,105.205)
O3': (-32.847,-4.001,105.842)
Image (generated by PyMOL):