ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01288:0893

Extra

PDB:
ATOM 1 O3' A A1287 16.311 111.650 80.066 1.00 32.35 O
ATOM 2 P G A1288 16.166 113.005 79.228 1.00 32.69 P
ATOM 3 OP1 G A1288 16.173 114.123 80.208 1.00 30.08 O
ATOM 4 OP2 G A1288 15.023 112.844 78.306 1.00 32.78 O
ATOM 5 O5' G A1288 17.501 113.055 78.364 1.00 33.58 O
ATOM 6 C5' G A1288 18.779 113.131 79.010 1.00 31.57 C
ATOM 7 C4' G A1288 19.869 112.653 78.087 1.00 31.02 C
ATOM 8 O4' G A1288 19.563 111.318 77.621 1.00 29.09 O
ATOM 9 C3' G A1288 20.089 113.458 76.817 1.00 30.13 C
ATOM 10 O3' G A1288 20.894 114.596 77.126 1.00 33.05 O
ATOM 11 C2' G A1288 20.805 112.447 75.929 1.00 30.01 C
ATOM 12 O2' G A1288 22.170 112.290 76.263 1.00 31.83 O
ATOM 13 C1' G A1288 20.093 111.148 76.320 1.00 29.73 C
ATOM 14 N9 G A1288 19.013 110.729 75.431 1.00 28.78 N
ATOM 15 C8 G A1288 17.722 111.201 75.403 1.00 27.81 C
ATOM 16 N7 G A1288 16.975 110.587 74.527 1.00 27.21 N
ATOM 17 C5 G A1288 17.825 109.664 73.936 1.00 27.79 C
ATOM 18 C6 G A1288 17.575 108.708 72.929 1.00 29.83 C
ATOM 19 O6 G A1288 16.518 108.471 72.347 1.00 36.48 O
ATOM 20 N1 G A1288 18.719 107.982 72.612 1.00 29.05 N
ATOM 21 C2 G A1288 19.948 108.158 73.195 1.00 28.20 C
ATOM 22 N2 G A1288 20.939 107.376 72.747 1.00 25.55 N
ATOM 23 N3 G A1288 20.189 109.041 74.147 1.00 28.56 N
ATOM 24 C4 G A1288 19.089 109.753 74.468 1.00 27.46 C
ATOM 25 P A A1289 20.982 115.838 76.108 1.00 32.97 P
ATOM 26 OP1 A A1289 21.730 116.904 76.821 1.00 32.93 O
ATOM 27 OP2 A A1289 19.639 116.137 75.578 1.00 31.93 O
ATOM 28 O5' A A1289 21.870 115.284 74.906 1.00 31.01 O
TER

ATOM 1 O3' C B 892 29.345 113.077 74.353 1.00 26.14 O
ATOM 2 P C B 893 29.170 111.721 75.201 1.00 26.18 P
ATOM 3 OP1 C B 893 29.237 112.090 76.628 1.00 24.80 O
ATOM 4 OP2 C B 893 30.093 110.700 74.657 1.00 27.26 O
ATOM 5 O5' C B 893 27.693 111.222 74.890 1.00 29.74 O
ATOM 6 C5' C B 893 26.553 111.927 75.410 1.00 31.06 C
ATOM 7 C4' C B 893 25.284 111.183 75.079 1.00 31.36 C
ATOM 8 O4' C B 893 25.167 111.050 73.634 1.00 31.12 O
ATOM 9 C3' C B 893 25.193 109.742 75.562 1.00 31.33 C
ATOM 10 O3' C B 893 24.816 109.614 76.920 1.00 30.33 O
ATOM 11 C2' C B 893 24.112 109.200 74.654 1.00 31.33 C
ATOM 12 O2' C B 893 22.855 109.720 75.035 1.00 29.77 O
ATOM 13 C1' C B 893 24.536 109.815 73.321 1.00 30.79 C
ATOM 14 N1 C B 893 25.512 108.956 72.628 1.00 30.97 N
ATOM 15 C2 C B 893 25.076 107.747 72.067 1.00 33.14 C
ATOM 16 O2 C B 893 23.888 107.411 72.199 1.00 35.23 O
ATOM 17 N3 C B 893 25.962 106.971 71.400 1.00 33.13 N
ATOM 18 C4 C B 893 27.234 107.353 71.291 1.00 30.91 C
ATOM 19 N4 C B 893 28.064 106.567 70.607 1.00 30.91 N
ATOM 20 C5 C B 893 27.709 108.560 71.872 1.00 31.67 C
ATOM 21 C6 C B 893 26.824 109.326 72.526 1.00 32.63 C
ATOM 22 P A B 894 25.396 108.390 77.786 1.00 31.26 P
ATOM 23 OP1 A B 894 25.115 108.742 79.197 1.00 31.20 O
ATOM 24 OP2 A B 894 26.786 108.120 77.359 1.00 28.41 O
ATOM 25 O5' A B 894 24.564 107.099 77.347 1.00 29.67 O
TER

Atoms:
OP1: (16.173,114.123,80.208)
OP2: (15.023,112.844,78.306)
C3': (20.089,113.458,76.817)
C1': (20.093,111.148,76.320)
C5': (18.779,113.131,79.010)
O6: (16.518,108.471,72.347)
O4': (19.563,111.318,77.621)
C8: (17.722,111.201,75.403)
C2: (19.948,108.158,73.195)
C6: (17.575,108.708,72.929)
C5: (17.825,109.664,73.936)
C4: (19.089,109.753,74.468)
P: (16.166,113.005,79.228)
C4': (19.869,112.653,78.087)
C2': (20.805,112.447,75.929)
O2': (22.170,112.290,76.263)
N1: (18.719,107.982,72.612)
N2: (20.939,107.376,72.747)
N3: (20.189,109.041,74.147)
N7: (16.975,110.587,74.527)
N9: (19.013,110.729,75.431)
O5': (17.501,113.055,78.364)
O3': (20.894,114.596,77.126)
C2: (25.076,107.747,72.067)
OP1: (29.237,112.090,76.628)
OP2: (30.093,110.700,74.657)
C4: (27.234,107.353,71.291)
O5': (27.693,111.222,74.890)
C3': (25.193,109.742,75.562)
C1': (24.536,109.815,73.321)
O4': (25.167,111.050,73.634)
C5': (26.553,111.927,75.410)
P: (29.170,111.721,75.201)
O2: (23.888,107.411,72.199)
C4': (25.284,111.183,75.079)
C2': (24.112,109.200,74.654)
O2': (22.855,109.720,75.035)
N1: (25.512,108.956,72.628)
N3: (25.962,106.971,71.400)
N4: (28.064,106.567,70.607)
C6: (26.824,109.326,72.526)
C5: (27.709,108.560,71.872)
O3': (24.816,109.614,76.920)
Image (generated by PyMOL):
PyMOL image
show in jmol