Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A479:A691
Extra
PDB:
ATOM 1 O3' U A 478 46.698 -54.498 -32.057 1.00 21.15 O
ATOM 2 P G A 479 47.246 -55.594 -33.113 1.00 26.12 P
ATOM 3 OP1 G A 479 46.065 -56.275 -33.709 1.00 35.74 O
ATOM 4 OP2 G A 479 48.246 -56.421 -32.424 1.00 29.38 O
ATOM 5 O5' G A 479 47.954 -54.692 -34.204 1.00 21.43 O
ATOM 6 C5' G A 479 47.258 -53.639 -34.841 1.00 24.83 C
ATOM 7 C4' G A 479 48.151 -52.914 -35.795 1.00 24.57 C
ATOM 8 O4' G A 479 49.039 -52.059 -35.052 1.00 28.56 O
ATOM 9 C3' G A 479 49.052 -53.800 -36.641 1.00 21.80 C
ATOM 10 O3' G A 479 48.418 -54.189 -37.837 1.00 24.04 O
ATOM 11 C2' G A 479 50.265 -52.931 -36.880 1.00 31.51 C
ATOM 12 O2' G A 479 49.992 -52.036 -37.941 1.00 35.86 O
ATOM 13 C1' G A 479 50.337 -52.116 -35.589 1.00 34.03 C
ATOM 14 N9 G A 479 51.242 -52.678 -34.543 1.00 30.80 N
ATOM 15 C8 G A 479 50.927 -53.707 -33.693 1.00 33.91 C
ATOM 16 N7 G A 479 51.810 -53.963 -32.786 1.00 31.48 N
ATOM 17 C5 G A 479 52.776 -53.004 -32.992 1.00 34.80 C
ATOM 18 C6 G A 479 53.997 -52.781 -32.280 1.00 36.65 C
ATOM 19 O6 G A 479 54.489 -53.390 -31.298 1.00 45.53 O
ATOM 20 N1 G A 479 54.685 -51.712 -32.820 1.00 32.89 N
ATOM 21 C2 G A 479 54.247 -50.976 -33.881 1.00 35.52 C
ATOM 22 N2 G A 479 55.051 -49.983 -34.251 1.00 39.26 N
ATOM 23 N3 G A 479 53.123 -51.174 -34.544 1.00 35.74 N
ATOM 24 C4 G A 479 52.431 -52.201 -34.054 1.00 31.50 C
ATOM 25 P A A 480 49.001 -55.375 -38.745 1.00 27.90 P
ATOM 26 OP1 A A 480 48.103 -55.515 -39.933 1.00 26.73 O
ATOM 27 OP2 A A 480 49.195 -56.552 -37.862 1.00 30.08 O
ATOM 28 O5' A A 480 50.411 -54.786 -39.208 1.00 33.38 O
TER
ATOM 1 O3' G B 690 54.091 -47.875 -44.069 1.00 26.78 O
ATOM 2 P C B 691 53.092 -47.258 -42.979 1.00 39.47 P
ATOM 3 OP1 C B 691 51.731 -47.535 -43.445 1.00 46.78 O
ATOM 4 OP2 C B 691 53.498 -45.831 -42.748 1.00 26.48 O
ATOM 5 O5' C B 691 53.399 -48.128 -41.678 1.00 29.25 O
ATOM 6 C5' C B 691 52.775 -49.387 -41.481 1.00 30.92 C
ATOM 7 C4' C B 691 52.826 -49.820 -40.038 1.00 24.71 C
ATOM 8 O4' C B 691 54.196 -49.953 -39.623 1.00 34.69 O
ATOM 9 C3' C B 691 52.224 -48.860 -39.046 1.00 25.59 C
ATOM 10 O3' C B 691 50.838 -49.050 -38.917 1.00 26.76 O
ATOM 11 C2' C B 691 52.982 -49.178 -37.783 1.00 30.37 C
ATOM 12 O2' C B 691 52.515 -50.400 -37.249 1.00 36.72 O
ATOM 13 C1' C B 691 54.359 -49.438 -38.330 1.00 33.81 C
ATOM 14 N1 C B 691 55.197 -48.219 -38.410 1.00 34.50 N
ATOM 15 C2 C B 691 55.960 -47.838 -37.303 1.00 33.13 C
ATOM 16 O2 C B 691 55.812 -48.496 -36.274 1.00 35.08 O
ATOM 17 N3 C B 691 56.784 -46.773 -37.365 1.00 26.43 N
ATOM 18 C4 C B 691 56.867 -46.141 -38.513 1.00 25.73 C
ATOM 19 N4 C B 691 57.644 -45.097 -38.570 1.00 32.60 N
ATOM 20 C5 C B 691 56.161 -46.516 -39.679 1.00 32.28 C
ATOM 21 C6 C B 691 55.343 -47.567 -39.593 1.00 33.07 C
ATOM 22 P G B 692 49.923 -47.955 -38.196 1.00 22.93 P
ATOM 23 OP1 G B 692 48.525 -48.394 -38.374 1.00 31.42 O
ATOM 24 OP2 G B 692 50.325 -46.629 -38.702 1.00 20.19 O
ATOM 25 O5' G B 692 50.332 -48.064 -36.679 1.00 23.54 O
TER
ATOM 2 P G A 479 47.246 -55.594 -33.113 1.00 26.12 P
ATOM 3 OP1 G A 479 46.065 -56.275 -33.709 1.00 35.74 O
ATOM 4 OP2 G A 479 48.246 -56.421 -32.424 1.00 29.38 O
ATOM 5 O5' G A 479 47.954 -54.692 -34.204 1.00 21.43 O
ATOM 6 C5' G A 479 47.258 -53.639 -34.841 1.00 24.83 C
ATOM 7 C4' G A 479 48.151 -52.914 -35.795 1.00 24.57 C
ATOM 8 O4' G A 479 49.039 -52.059 -35.052 1.00 28.56 O
ATOM 9 C3' G A 479 49.052 -53.800 -36.641 1.00 21.80 C
ATOM 10 O3' G A 479 48.418 -54.189 -37.837 1.00 24.04 O
ATOM 11 C2' G A 479 50.265 -52.931 -36.880 1.00 31.51 C
ATOM 12 O2' G A 479 49.992 -52.036 -37.941 1.00 35.86 O
ATOM 13 C1' G A 479 50.337 -52.116 -35.589 1.00 34.03 C
ATOM 14 N9 G A 479 51.242 -52.678 -34.543 1.00 30.80 N
ATOM 15 C8 G A 479 50.927 -53.707 -33.693 1.00 33.91 C
ATOM 16 N7 G A 479 51.810 -53.963 -32.786 1.00 31.48 N
ATOM 17 C5 G A 479 52.776 -53.004 -32.992 1.00 34.80 C
ATOM 18 C6 G A 479 53.997 -52.781 -32.280 1.00 36.65 C
ATOM 19 O6 G A 479 54.489 -53.390 -31.298 1.00 45.53 O
ATOM 20 N1 G A 479 54.685 -51.712 -32.820 1.00 32.89 N
ATOM 21 C2 G A 479 54.247 -50.976 -33.881 1.00 35.52 C
ATOM 22 N2 G A 479 55.051 -49.983 -34.251 1.00 39.26 N
ATOM 23 N3 G A 479 53.123 -51.174 -34.544 1.00 35.74 N
ATOM 24 C4 G A 479 52.431 -52.201 -34.054 1.00 31.50 C
ATOM 25 P A A 480 49.001 -55.375 -38.745 1.00 27.90 P
ATOM 26 OP1 A A 480 48.103 -55.515 -39.933 1.00 26.73 O
ATOM 27 OP2 A A 480 49.195 -56.552 -37.862 1.00 30.08 O
ATOM 28 O5' A A 480 50.411 -54.786 -39.208 1.00 33.38 O
TER
ATOM 1 O3' G B 690 54.091 -47.875 -44.069 1.00 26.78 O
ATOM 2 P C B 691 53.092 -47.258 -42.979 1.00 39.47 P
ATOM 3 OP1 C B 691 51.731 -47.535 -43.445 1.00 46.78 O
ATOM 4 OP2 C B 691 53.498 -45.831 -42.748 1.00 26.48 O
ATOM 5 O5' C B 691 53.399 -48.128 -41.678 1.00 29.25 O
ATOM 6 C5' C B 691 52.775 -49.387 -41.481 1.00 30.92 C
ATOM 7 C4' C B 691 52.826 -49.820 -40.038 1.00 24.71 C
ATOM 8 O4' C B 691 54.196 -49.953 -39.623 1.00 34.69 O
ATOM 9 C3' C B 691 52.224 -48.860 -39.046 1.00 25.59 C
ATOM 10 O3' C B 691 50.838 -49.050 -38.917 1.00 26.76 O
ATOM 11 C2' C B 691 52.982 -49.178 -37.783 1.00 30.37 C
ATOM 12 O2' C B 691 52.515 -50.400 -37.249 1.00 36.72 O
ATOM 13 C1' C B 691 54.359 -49.438 -38.330 1.00 33.81 C
ATOM 14 N1 C B 691 55.197 -48.219 -38.410 1.00 34.50 N
ATOM 15 C2 C B 691 55.960 -47.838 -37.303 1.00 33.13 C
ATOM 16 O2 C B 691 55.812 -48.496 -36.274 1.00 35.08 O
ATOM 17 N3 C B 691 56.784 -46.773 -37.365 1.00 26.43 N
ATOM 18 C4 C B 691 56.867 -46.141 -38.513 1.00 25.73 C
ATOM 19 N4 C B 691 57.644 -45.097 -38.570 1.00 32.60 N
ATOM 20 C5 C B 691 56.161 -46.516 -39.679 1.00 32.28 C
ATOM 21 C6 C B 691 55.343 -47.567 -39.593 1.00 33.07 C
ATOM 22 P G B 692 49.923 -47.955 -38.196 1.00 22.93 P
ATOM 23 OP1 G B 692 48.525 -48.394 -38.374 1.00 31.42 O
ATOM 24 OP2 G B 692 50.325 -46.629 -38.702 1.00 20.19 O
ATOM 25 O5' G B 692 50.332 -48.064 -36.679 1.00 23.54 O
TER
Atoms:
OP1: (46.065,-56.275,-33.709)
OP2: (48.246,-56.421,-32.424)
C3': (49.052,-53.800,-36.641)
C1': (50.337,-52.116,-35.589)
C5': (47.258,-53.639,-34.841)
O6: (54.489,-53.390,-31.298)
O4': (49.039,-52.059,-35.052)
C8: (50.927,-53.707,-33.693)
C2: (54.247,-50.976,-33.881)
C6: (53.997,-52.781,-32.280)
C5: (52.776,-53.004,-32.992)
C4: (52.431,-52.201,-34.054)
P: (47.246,-55.594,-33.113)
C4': (48.151,-52.914,-35.795)
C2': (50.265,-52.931,-36.880)
O2': (49.992,-52.036,-37.941)
N1: (54.685,-51.712,-32.820)
N2: (55.051,-49.983,-34.251)
N3: (53.123,-51.174,-34.544)
N7: (51.810,-53.963,-32.786)
N9: (51.242,-52.678,-34.543)
O5': (47.954,-54.692,-34.204)
O3': (48.418,-54.189,-37.837)
OP2: (48.246,-56.421,-32.424)
C3': (49.052,-53.800,-36.641)
C1': (50.337,-52.116,-35.589)
C5': (47.258,-53.639,-34.841)
O6: (54.489,-53.390,-31.298)
O4': (49.039,-52.059,-35.052)
C8: (50.927,-53.707,-33.693)
C2: (54.247,-50.976,-33.881)
C6: (53.997,-52.781,-32.280)
C5: (52.776,-53.004,-32.992)
C4: (52.431,-52.201,-34.054)
P: (47.246,-55.594,-33.113)
C4': (48.151,-52.914,-35.795)
C2': (50.265,-52.931,-36.880)
O2': (49.992,-52.036,-37.941)
N1: (54.685,-51.712,-32.820)
N2: (55.051,-49.983,-34.251)
N3: (53.123,-51.174,-34.544)
N7: (51.810,-53.963,-32.786)
N9: (51.242,-52.678,-34.543)
O5': (47.954,-54.692,-34.204)
O3': (48.418,-54.189,-37.837)
C2: (55.960,-47.838,-37.303)
OP1: (51.731,-47.535,-43.445)
OP2: (53.498,-45.831,-42.748)
C4: (56.867,-46.141,-38.513)
O5': (53.399,-48.128,-41.678)
C3': (52.224,-48.860,-39.046)
C1': (54.359,-49.438,-38.330)
O4': (54.196,-49.953,-39.623)
C5': (52.775,-49.387,-41.481)
P: (53.092,-47.258,-42.979)
O2: (55.812,-48.496,-36.274)
C4': (52.826,-49.820,-40.038)
C2': (52.982,-49.178,-37.783)
O2': (52.515,-50.400,-37.249)
N1: (55.197,-48.219,-38.410)
N3: (56.784,-46.773,-37.365)
N4: (57.644,-45.097,-38.570)
C6: (55.343,-47.567,-39.593)
C5: (56.161,-46.516,-39.679)
O3': (50.838,-49.050,-38.917)
OP1: (51.731,-47.535,-43.445)
OP2: (53.498,-45.831,-42.748)
C4: (56.867,-46.141,-38.513)
O5': (53.399,-48.128,-41.678)
C3': (52.224,-48.860,-39.046)
C1': (54.359,-49.438,-38.330)
O4': (54.196,-49.953,-39.623)
C5': (52.775,-49.387,-41.481)
P: (53.092,-47.258,-42.979)
O2: (55.812,-48.496,-36.274)
C4': (52.826,-49.820,-40.038)
C2': (52.982,-49.178,-37.783)
O2': (52.515,-50.400,-37.249)
N1: (55.197,-48.219,-38.410)
N3: (56.784,-46.773,-37.365)
N4: (57.644,-45.097,-38.570)
C6: (55.343,-47.567,-39.593)
C5: (56.161,-46.516,-39.679)
O3': (50.838,-49.050,-38.917)
Image (generated by PyMOL):