ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1346:A1290

Extra

PDB:
ATOM 1 O3' U A1345 8.137 -47.517 -23.652 1.00 68.85 O
ATOM 2 P U A1346 7.330 -48.892 -23.836 1.00 41.67 P
ATOM 3 OP1 U A1346 5.923 -48.524 -24.068 1.00 63.93 O
ATOM 4 OP2 U A1346 7.643 -49.753 -22.694 1.00 54.08 O
ATOM 5 O5' U A1346 7.977 -49.483 -25.150 1.00 42.35 O
ATOM 6 C5' U A1346 7.991 -48.725 -26.349 1.00 51.18 C
ATOM 7 C4' U A1346 8.358 -49.574 -27.532 1.00 46.68 C
ATOM 8 O4' U A1346 9.807 -49.726 -27.564 1.00 59.75 O
ATOM 9 C3' U A1346 7.785 -50.987 -27.496 1.00 45.98 C
ATOM 10 O3' U A1346 7.409 -51.401 -28.811 1.00 53.83 O
ATOM 11 C2' U A1346 8.971 -51.805 -26.981 1.00 54.21 C
ATOM 12 O2' U A1346 8.956 -53.178 -27.291 1.00 55.58 O
ATOM 13 C1' U A1346 10.127 -51.102 -27.642 1.00 59.11 C
ATOM 14 N1 U A1346 11.416 -51.352 -26.976 1.00 56.88 N
ATOM 15 C2 U A1346 12.191 -52.407 -27.446 1.00 59.53 C
ATOM 16 O2 U A1346 11.899 -53.117 -28.385 1.00 60.20 O
ATOM 17 N3 U A1346 13.360 -52.612 -26.778 1.00 60.91 N
ATOM 18 C4 U A1346 13.803 -51.870 -25.697 1.00 61.69 C
ATOM 19 O4 U A1346 14.883 -52.149 -25.168 1.00 66.14 O
ATOM 20 C5 U A1346 12.941 -50.810 -25.266 1.00 52.41 C
ATOM 21 C6 U A1346 11.794 -50.601 -25.902 1.00 53.17 C
ATOM 22 P C A1347 5.845 -51.571 -29.166 1.00 54.90 P
ATOM 23 OP1 C A1347 5.741 -51.805 -30.620 1.00 38.10 O
ATOM 24 OP2 C A1347 5.142 -50.400 -28.567 1.00 51.22 O
ATOM 25 O5' C A1347 5.446 -52.899 -28.379 1.00 49.65 O
TER

ATOM 1 O3' U B1289 15.133 -56.819 -28.180 1.00 34.58 O
ATOM 2 P U B1290 13.992 -55.742 -27.859 1.00 41.02 P
ATOM 3 OP1 U B1290 14.601 -54.397 -27.984 1.00 44.68 O
ATOM 4 OP2 U B1290 13.387 -56.121 -26.569 1.00 42.13 O
ATOM 5 O5' U B1290 12.958 -55.975 -29.045 1.00 50.50 O
ATOM 6 C5' U B1290 13.296 -55.629 -30.373 1.00 45.07 C
ATOM 7 C4' U B1290 12.084 -55.547 -31.259 1.00 44.10 C
ATOM 8 O4' U B1290 11.242 -56.686 -30.997 1.00 53.57 O
ATOM 9 C3' U B1290 11.200 -54.329 -31.044 1.00 45.74 C
ATOM 10 O3' U B1290 10.514 -54.036 -32.257 1.00 43.03 O
ATOM 11 C2' U B1290 10.194 -54.852 -30.039 1.00 50.73 C
ATOM 12 O2' U B1290 8.992 -54.115 -29.964 1.00 52.23 O
ATOM 13 C1' U B1290 9.965 -56.239 -30.595 1.00 56.26 C
ATOM 14 N1 U B1290 9.440 -57.183 -29.625 1.00 62.65 N
ATOM 15 C2 U B1290 8.143 -57.632 -29.763 1.00 76.45 C
ATOM 16 O2 U B1290 7.391 -57.276 -30.658 1.00 68.96 O
ATOM 17 N3 U B1290 7.768 -58.520 -28.782 1.00 82.31 N
ATOM 18 C4 U B1290 8.544 -58.979 -27.737 1.00 69.31 C
ATOM 19 O4 U B1290 8.081 -59.769 -26.928 1.00 76.33 O
ATOM 20 C5 U B1290 9.863 -58.460 -27.690 1.00 67.17 C
ATOM 21 C6 U B1290 10.256 -57.596 -28.617 1.00 62.28 C
ATOM 22 P A B1291 11.047 -52.905 -33.253 1.00 35.95 P
ATOM 23 OP1 A B1291 10.329 -53.092 -34.544 1.00 45.44 O
ATOM 24 OP2 A B1291 12.538 -52.981 -33.245 1.00 61.88 O
ATOM 25 O5' A B1291 10.564 -51.568 -32.554 1.00 34.31 O
TER

Atoms:
C4: (13.803,-51.870,-25.697)
N3: (13.360,-52.612,-26.778)
OP1: (5.923,-48.524,-24.068)
OP2: (7.643,-49.753,-22.694)
C2: (12.191,-52.407,-27.446)
C1': (10.127,-51.102,-27.642)
C3': (7.785,-50.987,-27.496)
O5': (7.977,-49.483,-25.150)
O4': (9.807,-49.726,-27.564)
C5': (7.991,-48.725,-26.349)
P: (7.330,-48.892,-23.836)
C4': (8.358,-49.574,-27.532)
C2': (8.971,-51.805,-26.981)
O2': (8.956,-53.178,-27.291)
N1: (11.416,-51.352,-26.976)
O4: (14.883,-52.149,-25.168)
O2: (11.899,-53.117,-28.385)
C6: (11.794,-50.601,-25.902)
C5: (12.941,-50.810,-25.266)
O3': (7.409,-51.401,-28.811)
C4: (8.544,-58.979,-27.737)
N3: (7.768,-58.520,-28.782)
OP1: (14.601,-54.397,-27.984)
OP2: (13.387,-56.121,-26.569)
C2: (8.143,-57.632,-29.763)
C1': (9.965,-56.239,-30.595)
C3': (11.200,-54.329,-31.044)
O5': (12.958,-55.975,-29.045)
O4': (11.242,-56.686,-30.997)
C5': (13.296,-55.629,-30.373)
P: (13.992,-55.742,-27.859)
C4': (12.084,-55.547,-31.259)
C2': (10.194,-54.852,-30.039)
O2': (8.992,-54.115,-29.964)
N1: (9.440,-57.183,-29.625)
O4: (8.081,-59.769,-26.928)
O2: (7.391,-57.276,-30.658)
C6: (10.256,-57.596,-28.617)
C5: (9.863,-58.460,-27.690)
O3': (10.514,-54.036,-32.257)
Image (generated by PyMOL):
PyMOL image
show in jmol