Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1384:A1387
Extra
PDB:
ATOM 1 O3' U A1383 3.885 -57.013 17.360 1.00 0.01 O
ATOM 2 P U A1384 3.016 -57.990 16.478 1.00 3.35 P
ATOM 3 OP1 U A1384 3.863 -59.148 16.105 1.00 3.35 O
ATOM 4 OP2 U A1384 2.410 -57.166 15.401 1.00 3.35 O
ATOM 5 O5' U A1384 1.919 -58.440 17.501 1.00 3.35 O
ATOM 6 C5' U A1384 2.291 -59.036 18.716 1.00 3.35 C
ATOM 7 C4' U A1384 1.109 -59.648 19.383 1.00 3.35 C
ATOM 8 O4' U A1384 0.333 -58.618 20.015 1.00 3.35 O
ATOM 9 C3' U A1384 0.138 -60.343 18.469 1.00 3.35 C
ATOM 10 O3' U A1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 11 C2' U A1384 -1.159 -60.244 19.238 1.00 3.35 C
ATOM 12 O2' U A1384 -1.185 -61.198 20.287 1.00 3.35 O
ATOM 13 C1' U A1384 -1.028 -58.887 19.873 1.00 3.35 C
ATOM 14 N1 U A1384 -1.596 -57.836 19.076 1.00 3.69 N
ATOM 15 C2 U A1384 -2.899 -57.560 19.271 1.00 3.69 C
ATOM 16 O2 U A1384 -3.604 -58.225 20.013 1.00 3.69 O
ATOM 17 N3 U A1384 -3.323 -56.498 18.543 1.00 3.69 N
ATOM 18 C4 U A1384 -2.571 -55.703 17.716 1.00 3.69 C
ATOM 19 O4 U A1384 -3.106 -54.771 17.108 1.00 3.69 O
ATOM 20 C5 U A1384 -1.203 -56.045 17.617 1.00 3.69 C
ATOM 21 C6 U A1384 -0.779 -57.080 18.310 1.00 3.69 C
ATOM 22 P A A1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 23 OP1 A A1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 24 OP2 A A1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 25 O5' A A1385 -1.030 -62.135 16.312 1.00 4.52 O
TER
ATOM 1 O3' A B1386 -8.185 -57.422 19.012 1.00 0.01 O
ATOM 2 P U B1387 -7.505 -55.997 19.196 1.00 0.01 P
ATOM 3 OP1 U B1387 -8.539 -54.991 18.933 1.00 0.01 O
ATOM 4 OP2 U B1387 -6.272 -55.994 18.370 1.00 0.01 O
ATOM 5 O5' U B1387 -7.144 -55.985 20.733 1.00 0.01 O
ATOM 6 C5' U B1387 -8.176 -56.059 21.703 1.00 0.01 C
ATOM 7 C4' U B1387 -8.018 -55.006 22.763 1.00 0.01 C
ATOM 8 O4' U B1387 -6.886 -55.342 23.583 1.00 0.01 O
ATOM 9 C3' U B1387 -7.750 -53.593 22.262 1.00 0.01 C
ATOM 10 O3' U B1387 -8.956 -52.876 22.009 1.00 0.01 O
ATOM 11 C2' U B1387 -6.913 -52.999 23.374 1.00 0.01 C
ATOM 12 O2' U B1387 -7.742 -52.585 24.456 1.00 0.01 O
ATOM 13 C1' U B1387 -6.106 -54.212 23.828 1.00 0.01 C
ATOM 14 N1 U B1387 -4.797 -54.388 23.105 1.00 0.01 N
ATOM 15 C2 U B1387 -3.999 -55.308 23.713 1.00 0.01 C
ATOM 16 O2 U B1387 -4.335 -55.854 24.716 1.00 0.01 O
ATOM 17 N3 U B1387 -2.797 -55.584 23.192 1.00 0.01 N
ATOM 18 C4 U B1387 -2.280 -55.056 22.054 1.00 0.01 C
ATOM 19 O4 U B1387 -1.148 -55.451 21.692 1.00 0.01 O
ATOM 20 C5 U B1387 -3.150 -54.095 21.429 1.00 0.01 C
ATOM 21 C6 U B1387 -4.344 -53.798 21.965 1.00 0.01 C
ATOM 22 P A B1388 -8.961 -51.467 21.221 1.00 0.01 P
ATOM 23 OP1 A B1388 -10.316 -50.908 21.353 1.00 0.01 O
ATOM 24 OP2 A B1388 -8.422 -51.707 19.870 1.00 0.01 O
ATOM 25 O5' A B1388 -7.937 -50.605 22.071 1.00 0.01 O
TER
ATOM 2 P U A1384 3.016 -57.990 16.478 1.00 3.35 P
ATOM 3 OP1 U A1384 3.863 -59.148 16.105 1.00 3.35 O
ATOM 4 OP2 U A1384 2.410 -57.166 15.401 1.00 3.35 O
ATOM 5 O5' U A1384 1.919 -58.440 17.501 1.00 3.35 O
ATOM 6 C5' U A1384 2.291 -59.036 18.716 1.00 3.35 C
ATOM 7 C4' U A1384 1.109 -59.648 19.383 1.00 3.35 C
ATOM 8 O4' U A1384 0.333 -58.618 20.015 1.00 3.35 O
ATOM 9 C3' U A1384 0.138 -60.343 18.469 1.00 3.35 C
ATOM 10 O3' U A1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 11 C2' U A1384 -1.159 -60.244 19.238 1.00 3.35 C
ATOM 12 O2' U A1384 -1.185 -61.198 20.287 1.00 3.35 O
ATOM 13 C1' U A1384 -1.028 -58.887 19.873 1.00 3.35 C
ATOM 14 N1 U A1384 -1.596 -57.836 19.076 1.00 3.69 N
ATOM 15 C2 U A1384 -2.899 -57.560 19.271 1.00 3.69 C
ATOM 16 O2 U A1384 -3.604 -58.225 20.013 1.00 3.69 O
ATOM 17 N3 U A1384 -3.323 -56.498 18.543 1.00 3.69 N
ATOM 18 C4 U A1384 -2.571 -55.703 17.716 1.00 3.69 C
ATOM 19 O4 U A1384 -3.106 -54.771 17.108 1.00 3.69 O
ATOM 20 C5 U A1384 -1.203 -56.045 17.617 1.00 3.69 C
ATOM 21 C6 U A1384 -0.779 -57.080 18.310 1.00 3.69 C
ATOM 22 P A A1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 23 OP1 A A1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 24 OP2 A A1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 25 O5' A A1385 -1.030 -62.135 16.312 1.00 4.52 O
TER
ATOM 1 O3' A B1386 -8.185 -57.422 19.012 1.00 0.01 O
ATOM 2 P U B1387 -7.505 -55.997 19.196 1.00 0.01 P
ATOM 3 OP1 U B1387 -8.539 -54.991 18.933 1.00 0.01 O
ATOM 4 OP2 U B1387 -6.272 -55.994 18.370 1.00 0.01 O
ATOM 5 O5' U B1387 -7.144 -55.985 20.733 1.00 0.01 O
ATOM 6 C5' U B1387 -8.176 -56.059 21.703 1.00 0.01 C
ATOM 7 C4' U B1387 -8.018 -55.006 22.763 1.00 0.01 C
ATOM 8 O4' U B1387 -6.886 -55.342 23.583 1.00 0.01 O
ATOM 9 C3' U B1387 -7.750 -53.593 22.262 1.00 0.01 C
ATOM 10 O3' U B1387 -8.956 -52.876 22.009 1.00 0.01 O
ATOM 11 C2' U B1387 -6.913 -52.999 23.374 1.00 0.01 C
ATOM 12 O2' U B1387 -7.742 -52.585 24.456 1.00 0.01 O
ATOM 13 C1' U B1387 -6.106 -54.212 23.828 1.00 0.01 C
ATOM 14 N1 U B1387 -4.797 -54.388 23.105 1.00 0.01 N
ATOM 15 C2 U B1387 -3.999 -55.308 23.713 1.00 0.01 C
ATOM 16 O2 U B1387 -4.335 -55.854 24.716 1.00 0.01 O
ATOM 17 N3 U B1387 -2.797 -55.584 23.192 1.00 0.01 N
ATOM 18 C4 U B1387 -2.280 -55.056 22.054 1.00 0.01 C
ATOM 19 O4 U B1387 -1.148 -55.451 21.692 1.00 0.01 O
ATOM 20 C5 U B1387 -3.150 -54.095 21.429 1.00 0.01 C
ATOM 21 C6 U B1387 -4.344 -53.798 21.965 1.00 0.01 C
ATOM 22 P A B1388 -8.961 -51.467 21.221 1.00 0.01 P
ATOM 23 OP1 A B1388 -10.316 -50.908 21.353 1.00 0.01 O
ATOM 24 OP2 A B1388 -8.422 -51.707 19.870 1.00 0.01 O
ATOM 25 O5' A B1388 -7.937 -50.605 22.071 1.00 0.01 O
TER
Atoms:
C4: (-2.571,-55.703,17.716)
N3: (-3.323,-56.498,18.543)
OP1: (3.863,-59.148,16.105)
OP2: (2.410,-57.166,15.401)
C2: (-2.899,-57.560,19.271)
C1': (-1.028,-58.887,19.873)
C3': (0.138,-60.343,18.469)
O5': (1.919,-58.440,17.501)
O4': (0.333,-58.618,20.015)
C5': (2.291,-59.036,18.716)
P: (3.016,-57.990,16.478)
C4': (1.109,-59.648,19.383)
C2': (-1.159,-60.244,19.238)
O2': (-1.185,-61.198,20.287)
N1: (-1.596,-57.836,19.076)
O4: (-3.106,-54.771,17.108)
O2: (-3.604,-58.225,20.013)
C6: (-0.779,-57.080,18.310)
C5: (-1.203,-56.045,17.617)
O3': (0.528,-61.667,18.215)
N3: (-3.323,-56.498,18.543)
OP1: (3.863,-59.148,16.105)
OP2: (2.410,-57.166,15.401)
C2: (-2.899,-57.560,19.271)
C1': (-1.028,-58.887,19.873)
C3': (0.138,-60.343,18.469)
O5': (1.919,-58.440,17.501)
O4': (0.333,-58.618,20.015)
C5': (2.291,-59.036,18.716)
P: (3.016,-57.990,16.478)
C4': (1.109,-59.648,19.383)
C2': (-1.159,-60.244,19.238)
O2': (-1.185,-61.198,20.287)
N1: (-1.596,-57.836,19.076)
O4: (-3.106,-54.771,17.108)
O2: (-3.604,-58.225,20.013)
C6: (-0.779,-57.080,18.310)
C5: (-1.203,-56.045,17.617)
O3': (0.528,-61.667,18.215)
C4: (-2.280,-55.056,22.054)
N3: (-2.797,-55.584,23.192)
OP1: (-8.539,-54.991,18.933)
OP2: (-6.272,-55.994,18.370)
C2: (-3.999,-55.308,23.713)
C1': (-6.106,-54.212,23.828)
C3': (-7.750,-53.593,22.262)
O5': (-7.144,-55.985,20.733)
O4': (-6.886,-55.342,23.583)
C5': (-8.176,-56.059,21.703)
P: (-7.505,-55.997,19.196)
C4': (-8.018,-55.006,22.763)
C2': (-6.913,-52.999,23.374)
O2': (-7.742,-52.585,24.456)
N1: (-4.797,-54.388,23.105)
O4: (-1.148,-55.451,21.692)
O2: (-4.335,-55.854,24.716)
C6: (-4.344,-53.798,21.965)
C5: (-3.150,-54.095,21.429)
O3': (-8.956,-52.876,22.009)
N3: (-2.797,-55.584,23.192)
OP1: (-8.539,-54.991,18.933)
OP2: (-6.272,-55.994,18.370)
C2: (-3.999,-55.308,23.713)
C1': (-6.106,-54.212,23.828)
C3': (-7.750,-53.593,22.262)
O5': (-7.144,-55.985,20.733)
O4': (-6.886,-55.342,23.583)
C5': (-8.176,-56.059,21.703)
P: (-7.505,-55.997,19.196)
C4': (-8.018,-55.006,22.763)
C2': (-6.913,-52.999,23.374)
O2': (-7.742,-52.585,24.456)
N1: (-4.797,-54.388,23.105)
O4: (-1.148,-55.451,21.692)
O2: (-4.335,-55.854,24.716)
C6: (-4.344,-53.798,21.965)
C5: (-3.150,-54.095,21.429)
O3': (-8.956,-52.876,22.009)
Image (generated by PyMOL):