ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A141:A171

Extra

PDB:
ATOM 1 O3' A A 140 61.327 122.322 40.206 1.00 36.05 O
ATOM 2 P C A 141 62.514 121.320 39.799 1.00 38.28 P
ATOM 3 OP1 C A 141 62.346 120.150 40.699 1.00 36.89 O
ATOM 4 OP2 C A 141 63.824 122.022 39.741 1.00 36.46 O
ATOM 5 O5' C A 141 62.120 120.844 38.328 1.00 37.32 O
ATOM 6 C5' C A 141 60.907 120.098 38.091 1.00 34.86 C
ATOM 7 C4' C A 141 60.701 119.876 36.610 1.00 32.70 C
ATOM 8 O4' C A 141 60.443 121.143 35.958 1.00 33.72 O
ATOM 9 C3' C A 141 61.883 119.300 35.857 1.00 32.09 C
ATOM 10 O3' C A 141 61.972 117.880 35.981 1.00 29.59 O
ATOM 11 C2' C A 141 61.608 119.755 34.432 1.00 33.06 C
ATOM 12 O2' C A 141 60.600 118.987 33.811 1.00 35.12 O
ATOM 13 C1' C A 141 61.028 121.149 34.666 1.00 34.08 C
ATOM 14 N1 C A 141 62.000 122.264 34.594 1.00 35.72 N
ATOM 15 C2 C A 141 62.264 122.872 33.351 1.00 35.25 C
ATOM 16 O2 C A 141 61.708 122.445 32.333 1.00 35.72 O
ATOM 17 N3 C A 141 63.122 123.913 33.299 1.00 35.67 N
ATOM 18 C4 C A 141 63.717 124.347 34.410 1.00 35.10 C
ATOM 19 N4 C A 141 64.555 125.376 34.309 1.00 35.56 N
ATOM 20 C5 C A 141 63.481 123.747 35.673 1.00 35.56 C
ATOM 21 C6 C A 141 62.627 122.718 35.722 1.00 35.65 C
ATOM 22 P C A 142 63.412 117.197 36.199 1.00 30.23 P
ATOM 23 OP1 C A 142 63.281 115.725 36.215 1.00 28.76 O
ATOM 24 OP2 C A 142 64.101 117.887 37.329 1.00 29.41 O
ATOM 25 O5' C A 142 64.203 117.584 34.876 1.00 28.94 O
TER

ATOM 1 O3' G B 170 74.866 127.817 29.908 1.00 40.99 O
ATOM 2 P A B 171 73.440 128.508 29.595 1.00 43.61 P
ATOM 3 OP1 A B 171 73.754 129.667 28.712 1.00 43.42 O
ATOM 4 OP2 A B 171 72.695 128.727 30.870 1.00 43.46 O
ATOM 5 O5' A B 171 72.629 127.420 28.764 1.00 40.81 O
ATOM 6 C5' A B 171 73.179 126.848 27.574 1.00 39.50 C
ATOM 7 C4' A B 171 72.239 125.810 27.022 1.00 38.87 C
ATOM 8 O4' A B 171 72.069 124.730 27.981 1.00 37.37 O
ATOM 9 C3' A B 171 70.818 126.277 26.785 1.00 38.67 C
ATOM 10 O3' A B 171 70.728 127.040 25.592 1.00 37.44 O
ATOM 11 C2' A B 171 70.095 124.943 26.698 1.00 38.83 C
ATOM 12 O2' A B 171 70.371 124.264 25.484 1.00 40.66 O
ATOM 13 C1' A B 171 70.772 124.176 27.836 1.00 37.92 C
ATOM 14 N9 A B 171 70.043 124.315 29.101 1.00 36.72 N
ATOM 15 C8 A B 171 70.368 125.045 30.215 1.00 36.19 C
ATOM 16 N7 A B 171 69.470 124.975 31.170 1.00 35.85 N
ATOM 17 C5 A B 171 68.489 124.141 30.650 1.00 35.57 C
ATOM 18 C6 A B 171 67.261 123.672 31.161 1.00 34.36 C
ATOM 19 N6 A B 171 66.768 124.005 32.354 1.00 33.07 N
ATOM 20 N1 A B 171 66.538 122.841 30.387 1.00 34.12 N
ATOM 21 C2 A B 171 67.008 122.511 29.185 1.00 35.45 C
ATOM 22 N3 A B 171 68.132 122.889 28.589 1.00 36.18 N
ATOM 23 C4 A B 171 68.836 123.716 29.384 1.00 36.69 C
ATOM 24 P G B 172 69.536 128.104 25.410 1.00 37.13 P
ATOM 25 OP1 G B 172 69.862 128.862 24.169 1.00 36.22 O
ATOM 26 OP2 G B 172 69.272 128.852 26.678 1.00 34.69 O
ATOM 27 O5' G B 172 68.261 127.196 25.104 1.00 36.56 O
TER

Atoms:
C2: (62.264,122.872,33.351)
OP1: (62.346,120.150,40.699)
OP2: (63.824,122.022,39.741)
C4: (63.717,124.347,34.410)
O5': (62.120,120.844,38.328)
C3': (61.883,119.300,35.857)
C1': (61.028,121.149,34.666)
O4': (60.443,121.143,35.958)
C5': (60.907,120.098,38.091)
P: (62.514,121.320,39.799)
O2: (61.708,122.445,32.333)
C4': (60.701,119.876,36.610)
C2': (61.608,119.755,34.432)
O2': (60.600,118.987,33.811)
N1: (62.000,122.264,34.594)
N3: (63.122,123.913,33.299)
N4: (64.555,125.376,34.309)
C6: (62.627,122.718,35.722)
C5: (63.481,123.747,35.673)
O3': (61.972,117.880,35.981)
OP1: (73.754,129.667,28.712)
OP2: (72.695,128.727,30.870)
C3': (70.818,126.277,26.785)
C1': (70.772,124.176,27.836)
C5': (73.179,126.848,27.574)
O4': (72.069,124.730,27.981)
C8: (70.368,125.045,30.215)
O2': (70.371,124.264,25.484)
C6: (67.261,123.672,31.161)
C5: (68.489,124.141,30.650)
C4: (68.836,123.716,29.384)
P: (73.440,128.508,29.595)
C4': (72.239,125.810,27.022)
C2': (70.095,124.943,26.698)
C2: (67.008,122.511,29.185)
N1: (66.538,122.841,30.387)
N3: (68.132,122.889,28.589)
N6: (66.768,124.005,32.354)
N7: (69.470,124.975,31.170)
N9: (70.043,124.315,29.101)
O5': (72.629,127.420,28.764)
O3': (70.728,127.040,25.592)
Image (generated by PyMOL):
PyMOL image
show in jmol