Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11022:11025
Extra
PDB:
ATOM 1 O3' U A1021 44.603 -83.383 47.464 1.00 58.45 O
ATOM 2 P U A1022 43.998 -84.859 47.275 1.00 66.38 P
ATOM 3 OP1 U A1022 42.580 -84.698 46.915 1.00 66.33 O
ATOM 4 OP2 U A1022 44.328 -85.632 48.494 1.00 66.59 O
ATOM 5 O5' U A1022 44.802 -85.422 46.028 1.00 66.85 O
ATOM 6 C5' U A1022 44.399 -85.091 44.715 1.00 66.88 C
ATOM 7 C4' U A1022 45.262 -85.757 43.677 1.00 67.39 C
ATOM 8 O4' U A1022 46.660 -85.646 44.033 1.00 67.31 O
ATOM 9 C3' U A1022 45.048 -87.240 43.481 1.00 68.15 C
ATOM 10 O3' U A1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 11 C2' U A1022 46.360 -87.694 42.863 1.00 68.51 C
ATOM 12 O2' U A1022 46.366 -87.425 41.465 1.00 68.62 O
ATOM 13 C1' U A1022 47.366 -86.771 43.554 1.00 67.97 C
ATOM 14 N1 U A1022 48.008 -87.416 44.697 1.00 68.13 N
ATOM 15 C2 U A1022 49.000 -88.358 44.508 1.00 68.68 C
ATOM 16 O2 U A1022 49.399 -88.721 43.414 1.00 69.05 O
ATOM 17 N3 U A1022 49.498 -88.878 45.678 1.00 68.79 N
ATOM 18 C4 U A1022 49.121 -88.528 46.972 1.00 68.41 C
ATOM 19 O4 U A1022 49.665 -89.070 47.948 1.00 68.58 O
ATOM 20 C5 U A1022 48.095 -87.534 47.062 1.00 67.85 C
ATOM 21 C6 U A1022 47.598 -87.035 45.943 1.00 67.74 C
ATOM 22 P A A1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 23 OP1 A A1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 24 OP2 A A1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 25 O5' A A1023 43.118 -89.817 42.945 1.00 68.77 O
TER
ATOM 1 O3' A B1024 52.131 -92.676 44.133 1.00 71.36 O
ATOM 2 P U B1025 52.541 -91.878 45.465 1.00110.02 P
ATOM 3 OP1 U B1025 51.900 -92.555 46.610 1.00110.18 O
ATOM 4 OP2 U B1025 52.258 -90.464 45.232 1.00109.29 O
ATOM 5 O5' U B1025 54.092 -92.107 45.520 1.00110.23 O
ATOM 6 C5' U B1025 54.794 -92.428 44.338 1.00110.63 C
ATOM 7 C4' U B1025 54.772 -91.281 43.376 1.00110.17 C
ATOM 8 O4' U B1025 55.534 -90.200 43.939 1.00109.56 O
ATOM 9 C3' U B1025 55.361 -91.567 42.012 1.00110.58 C
ATOM 10 O3' U B1025 54.624 -90.847 41.037 1.00110.32 O
ATOM 11 C2' U B1025 56.794 -91.025 42.096 1.00110.39 C
ATOM 12 O2' U B1025 57.254 -90.405 40.917 1.00110.29 O
ATOM 13 C1' U B1025 56.762 -90.028 43.255 1.00109.67 C
ATOM 14 N1 U B1025 57.843 -90.276 44.235 1.00109.74 N
ATOM 15 C2 U B1025 58.654 -89.282 44.775 1.00109.21 C
ATOM 16 O2 U B1025 58.573 -88.084 44.507 1.00108.62 O
ATOM 17 N3 U B1025 59.575 -89.811 45.678 1.00109.44 N
ATOM 18 C4 U B1025 59.774 -91.156 46.072 1.00110.11 C
ATOM 19 O4 U B1025 60.650 -91.489 46.892 1.00110.26 O
ATOM 20 C5 U B1025 58.895 -92.096 45.456 1.00110.61 C
ATOM 21 C6 U B1025 58.007 -91.613 44.591 1.00110.41 C
ATOM 22 P U B1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 23 OP1 U B1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 24 OP2 U B1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 25 O5' U B1026 54.847 -89.707 38.830 1.00 95.84 O
TER
ATOM 2 P U A1022 43.998 -84.859 47.275 1.00 66.38 P
ATOM 3 OP1 U A1022 42.580 -84.698 46.915 1.00 66.33 O
ATOM 4 OP2 U A1022 44.328 -85.632 48.494 1.00 66.59 O
ATOM 5 O5' U A1022 44.802 -85.422 46.028 1.00 66.85 O
ATOM 6 C5' U A1022 44.399 -85.091 44.715 1.00 66.88 C
ATOM 7 C4' U A1022 45.262 -85.757 43.677 1.00 67.39 C
ATOM 8 O4' U A1022 46.660 -85.646 44.033 1.00 67.31 O
ATOM 9 C3' U A1022 45.048 -87.240 43.481 1.00 68.15 C
ATOM 10 O3' U A1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 11 C2' U A1022 46.360 -87.694 42.863 1.00 68.51 C
ATOM 12 O2' U A1022 46.366 -87.425 41.465 1.00 68.62 O
ATOM 13 C1' U A1022 47.366 -86.771 43.554 1.00 67.97 C
ATOM 14 N1 U A1022 48.008 -87.416 44.697 1.00 68.13 N
ATOM 15 C2 U A1022 49.000 -88.358 44.508 1.00 68.68 C
ATOM 16 O2 U A1022 49.399 -88.721 43.414 1.00 69.05 O
ATOM 17 N3 U A1022 49.498 -88.878 45.678 1.00 68.79 N
ATOM 18 C4 U A1022 49.121 -88.528 46.972 1.00 68.41 C
ATOM 19 O4 U A1022 49.665 -89.070 47.948 1.00 68.58 O
ATOM 20 C5 U A1022 48.095 -87.534 47.062 1.00 67.85 C
ATOM 21 C6 U A1022 47.598 -87.035 45.943 1.00 67.74 C
ATOM 22 P A A1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 23 OP1 A A1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 24 OP2 A A1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 25 O5' A A1023 43.118 -89.817 42.945 1.00 68.77 O
TER
ATOM 1 O3' A B1024 52.131 -92.676 44.133 1.00 71.36 O
ATOM 2 P U B1025 52.541 -91.878 45.465 1.00110.02 P
ATOM 3 OP1 U B1025 51.900 -92.555 46.610 1.00110.18 O
ATOM 4 OP2 U B1025 52.258 -90.464 45.232 1.00109.29 O
ATOM 5 O5' U B1025 54.092 -92.107 45.520 1.00110.23 O
ATOM 6 C5' U B1025 54.794 -92.428 44.338 1.00110.63 C
ATOM 7 C4' U B1025 54.772 -91.281 43.376 1.00110.17 C
ATOM 8 O4' U B1025 55.534 -90.200 43.939 1.00109.56 O
ATOM 9 C3' U B1025 55.361 -91.567 42.012 1.00110.58 C
ATOM 10 O3' U B1025 54.624 -90.847 41.037 1.00110.32 O
ATOM 11 C2' U B1025 56.794 -91.025 42.096 1.00110.39 C
ATOM 12 O2' U B1025 57.254 -90.405 40.917 1.00110.29 O
ATOM 13 C1' U B1025 56.762 -90.028 43.255 1.00109.67 C
ATOM 14 N1 U B1025 57.843 -90.276 44.235 1.00109.74 N
ATOM 15 C2 U B1025 58.654 -89.282 44.775 1.00109.21 C
ATOM 16 O2 U B1025 58.573 -88.084 44.507 1.00108.62 O
ATOM 17 N3 U B1025 59.575 -89.811 45.678 1.00109.44 N
ATOM 18 C4 U B1025 59.774 -91.156 46.072 1.00110.11 C
ATOM 19 O4 U B1025 60.650 -91.489 46.892 1.00110.26 O
ATOM 20 C5 U B1025 58.895 -92.096 45.456 1.00110.61 C
ATOM 21 C6 U B1025 58.007 -91.613 44.591 1.00110.41 C
ATOM 22 P U B1026 54.781 -91.185 39.471 1.00 96.50 P
ATOM 23 OP1 U B1026 53.529 -91.892 39.036 1.00 96.88 O
ATOM 24 OP2 U B1026 56.085 -91.892 39.296 1.00 97.00 O
ATOM 25 O5' U B1026 54.847 -89.707 38.830 1.00 95.84 O
TER
Atoms:
C4: (49.121,-88.528,46.972)
N3: (49.498,-88.878,45.678)
OP1: (42.580,-84.698,46.915)
OP2: (44.328,-85.632,48.494)
C2: (49.000,-88.358,44.508)
C1': (47.366,-86.771,43.554)
C3': (45.048,-87.240,43.481)
O5': (44.802,-85.422,46.028)
O4': (46.660,-85.646,44.033)
C5': (44.399,-85.091,44.715)
P: (43.998,-84.859,47.275)
C4': (45.262,-85.757,43.677)
C2': (46.360,-87.694,42.863)
O2': (46.366,-87.425,41.465)
N1: (48.008,-87.416,44.697)
O4: (49.665,-89.070,47.948)
O2: (49.399,-88.721,43.414)
C6: (47.598,-87.035,45.943)
C5: (48.095,-87.534,47.062)
O3': (43.948,-87.500,42.660)
N3: (49.498,-88.878,45.678)
OP1: (42.580,-84.698,46.915)
OP2: (44.328,-85.632,48.494)
C2: (49.000,-88.358,44.508)
C1': (47.366,-86.771,43.554)
C3': (45.048,-87.240,43.481)
O5': (44.802,-85.422,46.028)
O4': (46.660,-85.646,44.033)
C5': (44.399,-85.091,44.715)
P: (43.998,-84.859,47.275)
C4': (45.262,-85.757,43.677)
C2': (46.360,-87.694,42.863)
O2': (46.366,-87.425,41.465)
N1: (48.008,-87.416,44.697)
O4: (49.665,-89.070,47.948)
O2: (49.399,-88.721,43.414)
C6: (47.598,-87.035,45.943)
C5: (48.095,-87.534,47.062)
O3': (43.948,-87.500,42.660)
C4: (59.774,-91.156,46.072)
N3: (59.575,-89.811,45.678)
OP1: (51.900,-92.555,46.610)
OP2: (52.258,-90.464,45.232)
C2: (58.654,-89.282,44.775)
C1': (56.762,-90.028,43.255)
C3': (55.361,-91.567,42.012)
O5': (54.092,-92.107,45.520)
O4': (55.534,-90.200,43.939)
C5': (54.794,-92.428,44.338)
P: (52.541,-91.878,45.465)
C4': (54.772,-91.281,43.376)
C2': (56.794,-91.025,42.096)
O2': (57.254,-90.405,40.917)
N1: (57.843,-90.276,44.235)
O4: (60.650,-91.489,46.892)
O2: (58.573,-88.084,44.507)
C6: (58.007,-91.613,44.591)
C5: (58.895,-92.096,45.456)
O3': (54.624,-90.847,41.037)
N3: (59.575,-89.811,45.678)
OP1: (51.900,-92.555,46.610)
OP2: (52.258,-90.464,45.232)
C2: (58.654,-89.282,44.775)
C1': (56.762,-90.028,43.255)
C3': (55.361,-91.567,42.012)
O5': (54.092,-92.107,45.520)
O4': (55.534,-90.200,43.939)
C5': (54.794,-92.428,44.338)
P: (52.541,-91.878,45.465)
C4': (54.772,-91.281,43.376)
C2': (56.794,-91.025,42.096)
O2': (57.254,-90.405,40.917)
N1: (57.843,-90.276,44.235)
O4: (60.650,-91.489,46.892)
O2: (58.573,-88.084,44.507)
C6: (58.007,-91.613,44.591)
C5: (58.895,-92.096,45.456)
O3': (54.624,-90.847,41.037)
Image (generated by PyMOL):