Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X31:X39
Extra
PDB:
ATOM 1 O3' A A 30 -8.686 -7.508 24.387 1.00 61.78 O
ATOM 2 P A A 31 -8.176 -7.437 22.871 1.00 60.82 P
ATOM 3 OP1 A A 31 -9.362 -7.204 22.019 1.00 61.65 O
ATOM 4 OP2 A A 31 -7.299 -8.602 22.610 1.00 60.61 O
ATOM 5 O5' A A 31 -7.285 -6.110 22.849 1.00 59.69 O
ATOM 6 C5' A A 31 -7.868 -4.823 23.032 1.00 57.30 C
ATOM 7 C4' A A 31 -6.770 -3.784 23.161 1.00 55.55 C
ATOM 8 O4' A A 31 -5.957 -4.085 24.323 1.00 55.05 O
ATOM 9 C3' A A 31 -5.790 -3.734 21.997 1.00 54.43 C
ATOM 10 O3' A A 31 -6.290 -2.865 20.998 1.00 53.56 O
ATOM 11 C2' A A 31 -4.536 -3.175 22.663 1.00 54.65 C
ATOM 12 O2' A A 31 -4.549 -1.766 22.810 1.00 54.67 O
ATOM 13 C1' A A 31 -4.593 -3.820 24.043 1.00 54.03 C
ATOM 14 N9 A A 31 -3.818 -5.057 24.153 1.00 53.63 N
ATOM 15 C8 A A 31 -4.304 -6.331 24.270 1.00 53.40 C
ATOM 16 N7 A A 31 -3.374 -7.249 24.359 1.00 53.30 N
ATOM 17 C5 A A 31 -2.193 -6.529 24.297 1.00 53.40 C
ATOM 18 C6 A A 31 -0.835 -6.916 24.340 1.00 53.43 C
ATOM 19 N6 A A 31 -0.438 -8.185 24.460 1.00 53.45 N
ATOM 20 N1 A A 31 0.103 -5.947 24.251 1.00 53.51 N
ATOM 21 C2 A A 31 -0.292 -4.673 24.129 1.00 53.43 C
ATOM 22 N3 A A 31 -1.534 -4.189 24.083 1.00 53.34 N
ATOM 23 C4 A A 31 -2.447 -5.175 24.170 1.00 53.35 C
ATOM 24 P G A 32 -6.071 -3.146 19.437 1.00 53.64 P
ATOM 25 OP1 G A 32 -6.780 -2.069 18.711 1.00 53.88 O
ATOM 26 OP2 G A 32 -6.404 -4.561 19.162 1.00 53.62 O
ATOM 27 O5' G A 32 -4.502 -2.936 19.212 1.00 53.25 O
TER
ATOM 1 O3' A B 38 5.201 -16.676 23.355 1.00 46.53 O
ATOM 2 P C B 39 4.638 -16.498 24.843 1.00 46.01 P
ATOM 3 OP1 C B 39 5.503 -17.295 25.752 1.00 45.52 O
ATOM 4 OP2 C B 39 3.177 -16.735 24.784 1.00 44.35 O
ATOM 5 O5' C B 39 4.913 -14.954 25.158 1.00 45.08 O
ATOM 6 C5' C B 39 6.216 -14.524 25.529 1.00 45.46 C
ATOM 7 C4' C B 39 6.322 -13.016 25.459 1.00 45.80 C
ATOM 8 O4' C B 39 5.892 -12.577 24.145 1.00 46.23 O
ATOM 9 C3' C B 39 5.402 -12.277 26.420 1.00 46.28 C
ATOM 10 O3' C B 39 5.969 -12.185 27.735 1.00 46.56 O
ATOM 11 C2' C B 39 5.218 -10.931 25.721 1.00 45.87 C
ATOM 12 O2' C B 39 6.268 -10.018 25.967 1.00 45.76 O
ATOM 13 C1' C B 39 5.197 -11.347 24.247 1.00 45.48 C
ATOM 14 N1 C B 39 3.797 -11.447 23.698 1.00 45.12 N
ATOM 15 C2 C B 39 3.266 -10.360 22.987 1.00 44.99 C
ATOM 16 O2 C B 39 3.945 -9.344 22.799 1.00 45.58 O
ATOM 17 N3 C B 39 2.005 -10.438 22.508 1.00 45.57 N
ATOM 18 C4 C B 39 1.269 -11.531 22.711 1.00 45.58 C
ATOM 19 N4 C B 39 0.034 -11.535 22.204 1.00 45.19 N
ATOM 20 C5 C B 39 1.776 -12.656 23.434 1.00 45.58 C
ATOM 21 C6 C B 39 3.031 -12.566 23.903 1.00 45.46 C
ATOM 22 P C B 40 5.439 -13.180 28.875 1.00 47.42 P
ATOM 23 OP1 C B 40 4.225 -13.853 28.353 1.00 46.80 O
ATOM 24 OP2 C B 40 5.379 -12.416 30.142 1.00 46.60 O
ATOM 25 O5' C B 40 6.561 -14.318 28.992 1.00 47.28 O
TER
ATOM 2 P A A 31 -8.176 -7.437 22.871 1.00 60.82 P
ATOM 3 OP1 A A 31 -9.362 -7.204 22.019 1.00 61.65 O
ATOM 4 OP2 A A 31 -7.299 -8.602 22.610 1.00 60.61 O
ATOM 5 O5' A A 31 -7.285 -6.110 22.849 1.00 59.69 O
ATOM 6 C5' A A 31 -7.868 -4.823 23.032 1.00 57.30 C
ATOM 7 C4' A A 31 -6.770 -3.784 23.161 1.00 55.55 C
ATOM 8 O4' A A 31 -5.957 -4.085 24.323 1.00 55.05 O
ATOM 9 C3' A A 31 -5.790 -3.734 21.997 1.00 54.43 C
ATOM 10 O3' A A 31 -6.290 -2.865 20.998 1.00 53.56 O
ATOM 11 C2' A A 31 -4.536 -3.175 22.663 1.00 54.65 C
ATOM 12 O2' A A 31 -4.549 -1.766 22.810 1.00 54.67 O
ATOM 13 C1' A A 31 -4.593 -3.820 24.043 1.00 54.03 C
ATOM 14 N9 A A 31 -3.818 -5.057 24.153 1.00 53.63 N
ATOM 15 C8 A A 31 -4.304 -6.331 24.270 1.00 53.40 C
ATOM 16 N7 A A 31 -3.374 -7.249 24.359 1.00 53.30 N
ATOM 17 C5 A A 31 -2.193 -6.529 24.297 1.00 53.40 C
ATOM 18 C6 A A 31 -0.835 -6.916 24.340 1.00 53.43 C
ATOM 19 N6 A A 31 -0.438 -8.185 24.460 1.00 53.45 N
ATOM 20 N1 A A 31 0.103 -5.947 24.251 1.00 53.51 N
ATOM 21 C2 A A 31 -0.292 -4.673 24.129 1.00 53.43 C
ATOM 22 N3 A A 31 -1.534 -4.189 24.083 1.00 53.34 N
ATOM 23 C4 A A 31 -2.447 -5.175 24.170 1.00 53.35 C
ATOM 24 P G A 32 -6.071 -3.146 19.437 1.00 53.64 P
ATOM 25 OP1 G A 32 -6.780 -2.069 18.711 1.00 53.88 O
ATOM 26 OP2 G A 32 -6.404 -4.561 19.162 1.00 53.62 O
ATOM 27 O5' G A 32 -4.502 -2.936 19.212 1.00 53.25 O
TER
ATOM 1 O3' A B 38 5.201 -16.676 23.355 1.00 46.53 O
ATOM 2 P C B 39 4.638 -16.498 24.843 1.00 46.01 P
ATOM 3 OP1 C B 39 5.503 -17.295 25.752 1.00 45.52 O
ATOM 4 OP2 C B 39 3.177 -16.735 24.784 1.00 44.35 O
ATOM 5 O5' C B 39 4.913 -14.954 25.158 1.00 45.08 O
ATOM 6 C5' C B 39 6.216 -14.524 25.529 1.00 45.46 C
ATOM 7 C4' C B 39 6.322 -13.016 25.459 1.00 45.80 C
ATOM 8 O4' C B 39 5.892 -12.577 24.145 1.00 46.23 O
ATOM 9 C3' C B 39 5.402 -12.277 26.420 1.00 46.28 C
ATOM 10 O3' C B 39 5.969 -12.185 27.735 1.00 46.56 O
ATOM 11 C2' C B 39 5.218 -10.931 25.721 1.00 45.87 C
ATOM 12 O2' C B 39 6.268 -10.018 25.967 1.00 45.76 O
ATOM 13 C1' C B 39 5.197 -11.347 24.247 1.00 45.48 C
ATOM 14 N1 C B 39 3.797 -11.447 23.698 1.00 45.12 N
ATOM 15 C2 C B 39 3.266 -10.360 22.987 1.00 44.99 C
ATOM 16 O2 C B 39 3.945 -9.344 22.799 1.00 45.58 O
ATOM 17 N3 C B 39 2.005 -10.438 22.508 1.00 45.57 N
ATOM 18 C4 C B 39 1.269 -11.531 22.711 1.00 45.58 C
ATOM 19 N4 C B 39 0.034 -11.535 22.204 1.00 45.19 N
ATOM 20 C5 C B 39 1.776 -12.656 23.434 1.00 45.58 C
ATOM 21 C6 C B 39 3.031 -12.566 23.903 1.00 45.46 C
ATOM 22 P C B 40 5.439 -13.180 28.875 1.00 47.42 P
ATOM 23 OP1 C B 40 4.225 -13.853 28.353 1.00 46.80 O
ATOM 24 OP2 C B 40 5.379 -12.416 30.142 1.00 46.60 O
ATOM 25 O5' C B 40 6.561 -14.318 28.992 1.00 47.28 O
TER
Atoms:
OP1: (-9.362,-7.204,22.019)
OP2: (-7.299,-8.602,22.610)
C3': (-5.790,-3.734,21.997)
C1': (-4.593,-3.820,24.043)
C5': (-7.868,-4.823,23.032)
O4': (-5.957,-4.085,24.323)
C8: (-4.304,-6.331,24.270)
O2': (-4.549,-1.766,22.810)
C6: (-0.835,-6.916,24.340)
C5: (-2.193,-6.529,24.297)
C4: (-2.447,-5.175,24.170)
P: (-8.176,-7.437,22.871)
C4': (-6.770,-3.784,23.161)
C2': (-4.536,-3.175,22.663)
C2: (-0.292,-4.673,24.129)
N1: (0.103,-5.947,24.251)
N3: (-1.534,-4.189,24.083)
N6: (-0.438,-8.185,24.460)
N7: (-3.374,-7.249,24.359)
N9: (-3.818,-5.057,24.153)
O5': (-7.285,-6.110,22.849)
O3': (-6.290,-2.865,20.998)
OP2: (-7.299,-8.602,22.610)
C3': (-5.790,-3.734,21.997)
C1': (-4.593,-3.820,24.043)
C5': (-7.868,-4.823,23.032)
O4': (-5.957,-4.085,24.323)
C8: (-4.304,-6.331,24.270)
O2': (-4.549,-1.766,22.810)
C6: (-0.835,-6.916,24.340)
C5: (-2.193,-6.529,24.297)
C4: (-2.447,-5.175,24.170)
P: (-8.176,-7.437,22.871)
C4': (-6.770,-3.784,23.161)
C2': (-4.536,-3.175,22.663)
C2: (-0.292,-4.673,24.129)
N1: (0.103,-5.947,24.251)
N3: (-1.534,-4.189,24.083)
N6: (-0.438,-8.185,24.460)
N7: (-3.374,-7.249,24.359)
N9: (-3.818,-5.057,24.153)
O5': (-7.285,-6.110,22.849)
O3': (-6.290,-2.865,20.998)
C2: (3.266,-10.360,22.987)
OP1: (5.503,-17.295,25.752)
OP2: (3.177,-16.735,24.784)
C4: (1.269,-11.531,22.711)
O5': (4.913,-14.954,25.158)
C3': (5.402,-12.277,26.420)
C1': (5.197,-11.347,24.247)
O4': (5.892,-12.577,24.145)
C5': (6.216,-14.524,25.529)
P: (4.638,-16.498,24.843)
O2: (3.945,-9.344,22.799)
C4': (6.322,-13.016,25.459)
C2': (5.218,-10.931,25.721)
O2': (6.268,-10.018,25.967)
N1: (3.797,-11.447,23.698)
N3: (2.005,-10.438,22.508)
N4: (0.034,-11.535,22.204)
C6: (3.031,-12.566,23.903)
C5: (1.776,-12.656,23.434)
O3': (5.969,-12.185,27.735)
OP1: (5.503,-17.295,25.752)
OP2: (3.177,-16.735,24.784)
C4: (1.269,-11.531,22.711)
O5': (4.913,-14.954,25.158)
C3': (5.402,-12.277,26.420)
C1': (5.197,-11.347,24.247)
O4': (5.892,-12.577,24.145)
C5': (6.216,-14.524,25.529)
P: (4.638,-16.498,24.843)
O2: (3.945,-9.344,22.799)
C4': (6.322,-13.016,25.459)
C2': (5.218,-10.931,25.721)
O2': (6.268,-10.018,25.967)
N1: (3.797,-11.447,23.698)
N3: (2.005,-10.438,22.508)
N4: (0.034,-11.535,22.204)
C6: (3.031,-12.566,23.903)
C5: (1.776,-12.656,23.434)
O3': (5.969,-12.185,27.735)
Image (generated by PyMOL):