ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1252:A1030

Extra

PDB:
ATOM 1 O3' G A1251 32.531 101.699 84.847 1.00 33.00 O
ATOM 2 P U A1252 33.499 101.701 83.532 1.00 31.91 P
ATOM 3 OP1 U A1252 33.318 102.989 82.781 1.00 32.41 O
ATOM 4 OP2 U A1252 33.443 100.421 82.795 1.00 28.03 O
ATOM 5 O5' U A1252 34.956 101.822 84.159 1.00 33.15 O
ATOM 6 C5' U A1252 35.461 103.085 84.634 1.00 32.66 C
ATOM 7 C4' U A1252 36.945 102.999 84.787 1.00 32.22 C
ATOM 8 O4' U A1252 37.268 101.964 85.736 1.00 32.01 O
ATOM 9 C3' U A1252 37.634 102.559 83.518 1.00 33.26 C
ATOM 10 O3' U A1252 37.869 103.665 82.670 1.00 33.27 O
ATOM 11 C2' U A1252 38.928 101.965 84.035 1.00 33.28 C
ATOM 12 O2' U A1252 39.860 102.978 84.327 1.00 32.94 O
ATOM 13 C1' U A1252 38.455 101.311 85.333 1.00 32.75 C
ATOM 14 N1 U A1252 38.194 99.865 85.255 1.00 33.51 N
ATOM 15 C2 U A1252 39.288 99.005 85.120 1.00 32.79 C
ATOM 16 O2 U A1252 40.434 99.401 85.012 1.00 32.87 O
ATOM 17 N3 U A1252 38.974 97.669 85.106 1.00 31.71 N
ATOM 18 C4 U A1252 37.706 97.121 85.195 1.00 32.64 C
ATOM 19 O4 U A1252 37.572 95.898 85.195 1.00 33.24 O
ATOM 20 C5 U A1252 36.640 98.077 85.304 1.00 31.58 C
ATOM 21 C6 U A1252 36.911 99.375 85.329 1.00 30.58 C
ATOM 22 P A A1253 37.881 103.438 81.099 1.00 33.16 P
ATOM 23 OP1 A A1253 38.288 104.722 80.493 1.00 32.99 O
ATOM 24 OP2 A A1253 36.568 102.847 80.784 1.00 32.68 O
ATOM 25 O5' A A1253 39.056 102.386 80.856 1.00 32.57 O
TER

ATOM 1 O3' A B1029 41.096 102.574 91.255 1.00 30.52 O
ATOM 2 P G B1030 40.440 102.994 89.867 1.00 30.33 P
ATOM 3 OP1 G B1030 41.240 102.382 88.802 1.00 27.99 O
ATOM 4 OP2 G B1030 40.204 104.457 89.880 1.00 29.55 O
ATOM 5 O5' G B1030 39.032 102.281 89.881 1.00 31.78 O
ATOM 6 C5' G B1030 37.988 102.733 89.018 1.00 31.94 C
ATOM 7 C4' G B1030 36.912 101.694 88.949 1.00 32.60 C
ATOM 8 O4' G B1030 37.411 100.534 88.239 1.00 33.02 O
ATOM 9 C3' G B1030 36.410 101.199 90.294 1.00 32.58 C
ATOM 10 O3' G B1030 35.041 100.915 90.123 1.00 33.64 O
ATOM 11 C2' G B1030 37.213 99.920 90.509 1.00 32.25 C
ATOM 12 O2' G B1030 36.456 98.976 91.244 1.00 32.36 O
ATOM 13 C1' G B1030 37.387 99.413 89.080 1.00 33.10 C
ATOM 14 N9 G B1030 38.609 98.659 88.823 1.00 36.13 N
ATOM 15 C8 G B1030 39.872 99.155 88.602 1.00 35.89 C
ATOM 16 N7 G B1030 40.738 98.226 88.310 1.00 37.92 N
ATOM 17 C5 G B1030 40.007 97.046 88.374 1.00 37.80 C
ATOM 18 C6 G B1030 40.390 95.700 88.154 1.00 39.01 C
ATOM 19 O6 G B1030 41.509 95.245 87.866 1.00 41.71 O
ATOM 20 N1 G B1030 39.310 94.834 88.300 1.00 38.03 N
ATOM 21 C2 G B1030 38.037 95.202 88.618 1.00 36.78 C
ATOM 22 N2 G B1030 37.133 94.220 88.664 1.00 37.33 N
ATOM 23 N3 G B1030 37.675 96.432 88.857 1.00 36.39 N
ATOM 24 C4 G B1030 38.699 97.301 88.707 1.00 36.53 C
ATOM 25 P G B1031 33.972 102.109 90.143 1.00 32.97 P
ATOM 26 OP1 G B1031 33.277 101.978 88.865 1.00 35.03 O
ATOM 27 OP2 G B1031 34.579 103.421 90.511 1.00 33.95 O
ATOM 28 O5' G B1031 33.036 101.675 91.338 1.00 31.70 O
TER

Atoms:
C4: (37.706,97.121,85.195)
N3: (38.974,97.669,85.106)
OP1: (33.318,102.989,82.781)
OP2: (33.443,100.421,82.795)
C2: (39.288,99.005,85.120)
C1': (38.455,101.311,85.333)
C3': (37.634,102.559,83.518)
O5': (34.956,101.822,84.159)
O4': (37.268,101.964,85.736)
C5': (35.461,103.085,84.634)
P: (33.499,101.701,83.532)
C4': (36.945,102.999,84.787)
C2': (38.928,101.965,84.035)
O2': (39.860,102.978,84.327)
N1: (38.194,99.865,85.255)
O4: (37.572,95.898,85.195)
O2: (40.434,99.401,85.012)
C6: (36.911,99.375,85.329)
C5: (36.640,98.077,85.304)
O3': (37.869,103.665,82.670)
OP1: (41.240,102.382,88.802)
OP2: (40.204,104.457,89.880)
C3': (36.410,101.199,90.294)
C1': (37.387,99.413,89.080)
C5': (37.988,102.733,89.018)
O6: (41.509,95.245,87.866)
O4': (37.411,100.534,88.239)
C8: (39.872,99.155,88.602)
C2: (38.037,95.202,88.618)
C6: (40.390,95.700,88.154)
C5: (40.007,97.046,88.374)
C4: (38.699,97.301,88.707)
P: (40.440,102.994,89.867)
C4': (36.912,101.694,88.949)
C2': (37.213,99.920,90.509)
O2': (36.456,98.976,91.244)
N1: (39.310,94.834,88.300)
N2: (37.133,94.220,88.664)
N3: (37.675,96.432,88.857)
N7: (40.738,98.226,88.310)
N9: (38.609,98.659,88.823)
O5': (39.032,102.281,89.881)
O3': (35.041,100.915,90.123)
Image (generated by PyMOL):
PyMOL image
show in jmol