Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0141:0171
Extra
PDB:
ATOM 1 O3' A A 140 61.428 122.549 40.405 1.00 42.78 O
ATOM 2 P C A 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 3 OP1 C A 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 4 OP2 C A 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 5 O5' C A 141 62.211 121.081 38.512 1.00 40.82 O
ATOM 6 C5' C A 141 61.033 120.288 38.273 1.00 39.28 C
ATOM 7 C4' C A 141 60.825 120.090 36.787 1.00 37.51 C
ATOM 8 O4' C A 141 60.553 121.370 36.164 1.00 39.77 O
ATOM 9 C3' C A 141 62.017 119.545 36.018 1.00 37.27 C
ATOM 10 O3' C A 141 62.066 118.127 36.083 1.00 36.75 O
ATOM 11 C2' C A 141 61.727 120.018 34.603 1.00 38.67 C
ATOM 12 O2' C A 141 60.758 119.218 33.965 1.00 41.40 O
ATOM 13 C1' C A 141 61.117 121.395 34.864 1.00 40.22 C
ATOM 14 N1 C A 141 62.091 122.506 34.781 1.00 42.08 N
ATOM 15 C2 C A 141 62.374 123.063 33.526 1.00 40.84 C
ATOM 16 O2 C A 141 61.809 122.607 32.523 1.00 39.61 O
ATOM 17 N3 C A 141 63.253 124.084 33.439 1.00 41.60 N
ATOM 18 C4 C A 141 63.841 124.553 34.538 1.00 41.61 C
ATOM 19 N4 C A 141 64.689 125.568 34.401 1.00 43.49 N
ATOM 20 C5 C A 141 63.582 124.006 35.824 1.00 42.52 C
ATOM 21 C6 C A 141 62.708 122.994 35.901 1.00 43.37 C
ATOM 22 P C A 142 63.479 117.374 36.205 1.00 37.16 P
ATOM 23 OP1 C A 142 63.188 115.921 36.118 1.00 39.44 O
ATOM 24 OP2 C A 142 64.235 117.899 37.361 1.00 37.54 O
ATOM 25 O5' C A 142 64.272 117.803 34.895 1.00 36.45 O
TER
ATOM 1 O3' G B 170 74.956 128.071 30.006 1.00 42.73 O
ATOM 2 P A B 171 73.532 128.770 29.686 1.00 44.82 P
ATOM 3 OP1 A B 171 73.838 129.899 28.768 1.00 46.25 O
ATOM 4 OP2 A B 171 72.772 129.031 30.941 1.00 44.76 O
ATOM 5 O5' A B 171 72.727 127.669 28.861 1.00 43.51 O
ATOM 6 C5' A B 171 73.296 127.085 27.678 1.00 42.21 C
ATOM 7 C4' A B 171 72.368 126.049 27.099 1.00 41.82 C
ATOM 8 O4' A B 171 72.195 124.961 28.044 1.00 43.72 O
ATOM 9 C3' A B 171 70.947 126.491 26.807 1.00 41.24 C
ATOM 10 O3' A B 171 70.849 127.218 25.592 1.00 36.93 O
ATOM 11 C2' A B 171 70.223 125.153 26.740 1.00 43.69 C
ATOM 12 O2' A B 171 70.446 124.453 25.525 1.00 46.39 O
ATOM 13 C1' A B 171 70.901 124.398 27.885 1.00 42.97 C
ATOM 14 N9 A B 171 70.161 124.544 29.142 1.00 41.70 N
ATOM 15 C8 A B 171 70.464 125.321 30.231 1.00 40.00 C
ATOM 16 N7 A B 171 69.573 125.254 31.191 1.00 39.79 N
ATOM 17 C5 A B 171 68.623 124.369 30.705 1.00 38.85 C
ATOM 18 C6 A B 171 67.419 123.885 31.239 1.00 38.07 C
ATOM 19 N6 A B 171 66.946 124.225 32.439 1.00 35.20 N
ATOM 20 N1 A B 171 66.704 123.024 30.487 1.00 40.47 N
ATOM 21 C2 A B 171 67.175 122.670 29.289 1.00 39.19 C
ATOM 22 N3 A B 171 68.288 123.052 28.681 1.00 40.59 N
ATOM 23 C4 A B 171 68.976 123.916 29.449 1.00 40.88 C
ATOM 24 P G B 172 69.679 128.305 25.405 1.00 38.79 P
ATOM 25 OP1 G B 172 70.054 129.096 24.207 1.00 40.92 O
ATOM 26 OP2 G B 172 69.407 129.001 26.687 1.00 38.10 O
ATOM 27 O5' G B 172 68.375 127.454 25.059 1.00 39.52 O
TER
ATOM 2 P C A 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 3 OP1 C A 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 4 OP2 C A 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 5 O5' C A 141 62.211 121.081 38.512 1.00 40.82 O
ATOM 6 C5' C A 141 61.033 120.288 38.273 1.00 39.28 C
ATOM 7 C4' C A 141 60.825 120.090 36.787 1.00 37.51 C
ATOM 8 O4' C A 141 60.553 121.370 36.164 1.00 39.77 O
ATOM 9 C3' C A 141 62.017 119.545 36.018 1.00 37.27 C
ATOM 10 O3' C A 141 62.066 118.127 36.083 1.00 36.75 O
ATOM 11 C2' C A 141 61.727 120.018 34.603 1.00 38.67 C
ATOM 12 O2' C A 141 60.758 119.218 33.965 1.00 41.40 O
ATOM 13 C1' C A 141 61.117 121.395 34.864 1.00 40.22 C
ATOM 14 N1 C A 141 62.091 122.506 34.781 1.00 42.08 N
ATOM 15 C2 C A 141 62.374 123.063 33.526 1.00 40.84 C
ATOM 16 O2 C A 141 61.809 122.607 32.523 1.00 39.61 O
ATOM 17 N3 C A 141 63.253 124.084 33.439 1.00 41.60 N
ATOM 18 C4 C A 141 63.841 124.553 34.538 1.00 41.61 C
ATOM 19 N4 C A 141 64.689 125.568 34.401 1.00 43.49 N
ATOM 20 C5 C A 141 63.582 124.006 35.824 1.00 42.52 C
ATOM 21 C6 C A 141 62.708 122.994 35.901 1.00 43.37 C
ATOM 22 P C A 142 63.479 117.374 36.205 1.00 37.16 P
ATOM 23 OP1 C A 142 63.188 115.921 36.118 1.00 39.44 O
ATOM 24 OP2 C A 142 64.235 117.899 37.361 1.00 37.54 O
ATOM 25 O5' C A 142 64.272 117.803 34.895 1.00 36.45 O
TER
ATOM 1 O3' G B 170 74.956 128.071 30.006 1.00 42.73 O
ATOM 2 P A B 171 73.532 128.770 29.686 1.00 44.82 P
ATOM 3 OP1 A B 171 73.838 129.899 28.768 1.00 46.25 O
ATOM 4 OP2 A B 171 72.772 129.031 30.941 1.00 44.76 O
ATOM 5 O5' A B 171 72.727 127.669 28.861 1.00 43.51 O
ATOM 6 C5' A B 171 73.296 127.085 27.678 1.00 42.21 C
ATOM 7 C4' A B 171 72.368 126.049 27.099 1.00 41.82 C
ATOM 8 O4' A B 171 72.195 124.961 28.044 1.00 43.72 O
ATOM 9 C3' A B 171 70.947 126.491 26.807 1.00 41.24 C
ATOM 10 O3' A B 171 70.849 127.218 25.592 1.00 36.93 O
ATOM 11 C2' A B 171 70.223 125.153 26.740 1.00 43.69 C
ATOM 12 O2' A B 171 70.446 124.453 25.525 1.00 46.39 O
ATOM 13 C1' A B 171 70.901 124.398 27.885 1.00 42.97 C
ATOM 14 N9 A B 171 70.161 124.544 29.142 1.00 41.70 N
ATOM 15 C8 A B 171 70.464 125.321 30.231 1.00 40.00 C
ATOM 16 N7 A B 171 69.573 125.254 31.191 1.00 39.79 N
ATOM 17 C5 A B 171 68.623 124.369 30.705 1.00 38.85 C
ATOM 18 C6 A B 171 67.419 123.885 31.239 1.00 38.07 C
ATOM 19 N6 A B 171 66.946 124.225 32.439 1.00 35.20 N
ATOM 20 N1 A B 171 66.704 123.024 30.487 1.00 40.47 N
ATOM 21 C2 A B 171 67.175 122.670 29.289 1.00 39.19 C
ATOM 22 N3 A B 171 68.288 123.052 28.681 1.00 40.59 N
ATOM 23 C4 A B 171 68.976 123.916 29.449 1.00 40.88 C
ATOM 24 P G B 172 69.679 128.305 25.405 1.00 38.79 P
ATOM 25 OP1 G B 172 70.054 129.096 24.207 1.00 40.92 O
ATOM 26 OP2 G B 172 69.407 129.001 26.687 1.00 38.10 O
ATOM 27 O5' G B 172 68.375 127.454 25.059 1.00 39.52 O
TER
Atoms:
C2: (62.374,123.063,33.526)
OP1: (62.528,120.382,40.888)
OP2: (63.875,122.323,39.891)
C4: (63.841,124.553,34.538)
O5': (62.211,121.081,38.512)
C3': (62.017,119.545,36.018)
C1': (61.117,121.395,34.864)
O4': (60.553,121.370,36.164)
C5': (61.033,120.288,38.273)
P: (62.610,121.550,39.981)
O2: (61.809,122.607,32.523)
C4': (60.825,120.090,36.787)
C2': (61.727,120.018,34.603)
O2': (60.758,119.218,33.965)
N1: (62.091,122.506,34.781)
N3: (63.253,124.084,33.439)
N4: (64.689,125.568,34.401)
C6: (62.708,122.994,35.901)
C5: (63.582,124.006,35.824)
O3': (62.066,118.127,36.083)
OP1: (62.528,120.382,40.888)
OP2: (63.875,122.323,39.891)
C4: (63.841,124.553,34.538)
O5': (62.211,121.081,38.512)
C3': (62.017,119.545,36.018)
C1': (61.117,121.395,34.864)
O4': (60.553,121.370,36.164)
C5': (61.033,120.288,38.273)
P: (62.610,121.550,39.981)
O2: (61.809,122.607,32.523)
C4': (60.825,120.090,36.787)
C2': (61.727,120.018,34.603)
O2': (60.758,119.218,33.965)
N1: (62.091,122.506,34.781)
N3: (63.253,124.084,33.439)
N4: (64.689,125.568,34.401)
C6: (62.708,122.994,35.901)
C5: (63.582,124.006,35.824)
O3': (62.066,118.127,36.083)
OP1: (73.838,129.899,28.768)
OP2: (72.772,129.031,30.941)
C3': (70.947,126.491,26.807)
C1': (70.901,124.398,27.885)
C5': (73.296,127.085,27.678)
O4': (72.195,124.961,28.044)
C8: (70.464,125.321,30.231)
O2': (70.446,124.453,25.525)
C6: (67.419,123.885,31.239)
C5: (68.623,124.369,30.705)
C4: (68.976,123.916,29.449)
P: (73.532,128.770,29.686)
C4': (72.368,126.049,27.099)
C2': (70.223,125.153,26.740)
C2: (67.175,122.670,29.289)
N1: (66.704,123.024,30.487)
N3: (68.288,123.052,28.681)
N6: (66.946,124.225,32.439)
N7: (69.573,125.254,31.191)
N9: (70.161,124.544,29.142)
O5': (72.727,127.669,28.861)
O3': (70.849,127.218,25.592)
OP2: (72.772,129.031,30.941)
C3': (70.947,126.491,26.807)
C1': (70.901,124.398,27.885)
C5': (73.296,127.085,27.678)
O4': (72.195,124.961,28.044)
C8: (70.464,125.321,30.231)
O2': (70.446,124.453,25.525)
C6: (67.419,123.885,31.239)
C5: (68.623,124.369,30.705)
C4: (68.976,123.916,29.449)
P: (73.532,128.770,29.686)
C4': (72.368,126.049,27.099)
C2': (70.223,125.153,26.740)
C2: (67.175,122.670,29.289)
N1: (66.704,123.024,30.487)
N3: (68.288,123.052,28.681)
N6: (66.946,124.225,32.439)
N7: (69.573,125.254,31.191)
N9: (70.161,124.544,29.142)
O5': (72.727,127.669,28.861)
O3': (70.849,127.218,25.592)
Image (generated by PyMOL):