Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0141:0171
Extra
PDB:
ATOM 1 O3' A A 140 61.591 122.262 40.309 1.00 40.82 O
ATOM 2 P C A 141 62.798 121.297 39.892 1.00 42.35 P
ATOM 3 OP1 C A 141 62.735 120.121 40.790 1.00 41.67 O
ATOM 4 OP2 C A 141 64.037 122.110 39.829 1.00 41.85 O
ATOM 5 O5' C A 141 62.418 120.818 38.421 1.00 40.98 O
ATOM 6 C5' C A 141 61.202 120.086 38.178 1.00 38.58 C
ATOM 7 C4' C A 141 60.965 119.935 36.696 1.00 37.17 C
ATOM 8 O4' C A 141 60.710 121.233 36.104 1.00 37.72 O
ATOM 9 C3' C A 141 62.139 119.390 35.904 1.00 37.08 C
ATOM 10 O3' C A 141 62.194 117.977 35.958 1.00 35.97 O
ATOM 11 C2' C A 141 61.843 119.891 34.501 1.00 37.32 C
ATOM 12 O2' C A 141 60.857 119.111 33.866 1.00 39.65 O
ATOM 13 C1' C A 141 61.264 121.274 34.797 1.00 38.04 C
ATOM 14 N1 C A 141 62.262 122.361 34.735 1.00 38.56 N
ATOM 15 C2 C A 141 62.516 122.973 33.505 1.00 37.63 C
ATOM 16 O2 C A 141 61.932 122.562 32.495 1.00 37.56 O
ATOM 17 N3 C A 141 63.392 123.996 33.446 1.00 37.64 N
ATOM 18 C4 C A 141 64.012 124.407 34.548 1.00 36.84 C
ATOM 19 N4 C A 141 64.849 125.436 34.441 1.00 37.94 N
ATOM 20 C5 C A 141 63.796 123.788 35.808 1.00 37.19 C
ATOM 21 C6 C A 141 62.923 122.779 35.857 1.00 38.56 C
ATOM 22 P C A 142 63.597 117.252 36.230 1.00 39.10 P
ATOM 23 OP1 C A 142 63.349 115.790 36.288 1.00 39.86 O
ATOM 24 OP2 C A 142 64.252 117.931 37.378 1.00 39.69 O
ATOM 25 O5' C A 142 64.454 117.565 34.925 1.00 36.87 O
TER
ATOM 1 O3' G B 170 75.064 127.911 29.931 1.00 46.39 O
ATOM 2 P A B 171 73.625 128.575 29.628 1.00 48.63 P
ATOM 3 OP1 A B 171 73.883 129.717 28.708 1.00 49.06 O
ATOM 4 OP2 A B 171 72.876 128.802 30.899 1.00 46.45 O
ATOM 5 O5' A B 171 72.849 127.457 28.804 1.00 47.38 O
ATOM 6 C5' A B 171 73.422 126.905 27.608 1.00 46.41 C
ATOM 7 C4' A B 171 72.488 125.890 26.999 1.00 45.19 C
ATOM 8 O4' A B 171 72.327 124.766 27.908 1.00 44.77 O
ATOM 9 C3' A B 171 71.065 126.354 26.743 1.00 43.73 C
ATOM 10 O3' A B 171 70.955 127.132 25.554 1.00 40.73 O
ATOM 11 C2' A B 171 70.325 125.025 26.658 1.00 45.34 C
ATOM 12 O2' A B 171 70.504 124.351 25.421 1.00 45.94 O
ATOM 13 C1' A B 171 71.018 124.234 27.772 1.00 44.53 C
ATOM 14 N9 A B 171 70.317 124.367 29.052 1.00 43.76 N
ATOM 15 C8 A B 171 70.654 125.134 30.139 1.00 42.30 C
ATOM 16 N7 A B 171 69.787 125.067 31.120 1.00 42.78 N
ATOM 17 C5 A B 171 68.816 124.191 30.652 1.00 41.79 C
ATOM 18 C6 A B 171 67.615 123.717 31.209 1.00 40.59 C
ATOM 19 N6 A B 171 67.156 124.075 32.410 1.00 39.04 N
ATOM 20 N1 A B 171 66.885 122.852 30.477 1.00 41.52 N
ATOM 21 C2 A B 171 67.328 122.497 29.271 1.00 41.54 C
ATOM 22 N3 A B 171 68.427 122.879 28.636 1.00 43.47 N
ATOM 23 C4 A B 171 69.138 123.740 29.388 1.00 43.29 C
ATOM 24 P G B 172 69.709 128.139 25.365 1.00 41.61 P
ATOM 25 OP1 G B 172 69.957 128.872 24.102 1.00 43.60 O
ATOM 26 OP2 G B 172 69.448 128.902 26.612 1.00 37.78 O
ATOM 27 O5' G B 172 68.461 127.182 25.108 1.00 42.13 O
TER
ATOM 2 P C A 141 62.798 121.297 39.892 1.00 42.35 P
ATOM 3 OP1 C A 141 62.735 120.121 40.790 1.00 41.67 O
ATOM 4 OP2 C A 141 64.037 122.110 39.829 1.00 41.85 O
ATOM 5 O5' C A 141 62.418 120.818 38.421 1.00 40.98 O
ATOM 6 C5' C A 141 61.202 120.086 38.178 1.00 38.58 C
ATOM 7 C4' C A 141 60.965 119.935 36.696 1.00 37.17 C
ATOM 8 O4' C A 141 60.710 121.233 36.104 1.00 37.72 O
ATOM 9 C3' C A 141 62.139 119.390 35.904 1.00 37.08 C
ATOM 10 O3' C A 141 62.194 117.977 35.958 1.00 35.97 O
ATOM 11 C2' C A 141 61.843 119.891 34.501 1.00 37.32 C
ATOM 12 O2' C A 141 60.857 119.111 33.866 1.00 39.65 O
ATOM 13 C1' C A 141 61.264 121.274 34.797 1.00 38.04 C
ATOM 14 N1 C A 141 62.262 122.361 34.735 1.00 38.56 N
ATOM 15 C2 C A 141 62.516 122.973 33.505 1.00 37.63 C
ATOM 16 O2 C A 141 61.932 122.562 32.495 1.00 37.56 O
ATOM 17 N3 C A 141 63.392 123.996 33.446 1.00 37.64 N
ATOM 18 C4 C A 141 64.012 124.407 34.548 1.00 36.84 C
ATOM 19 N4 C A 141 64.849 125.436 34.441 1.00 37.94 N
ATOM 20 C5 C A 141 63.796 123.788 35.808 1.00 37.19 C
ATOM 21 C6 C A 141 62.923 122.779 35.857 1.00 38.56 C
ATOM 22 P C A 142 63.597 117.252 36.230 1.00 39.10 P
ATOM 23 OP1 C A 142 63.349 115.790 36.288 1.00 39.86 O
ATOM 24 OP2 C A 142 64.252 117.931 37.378 1.00 39.69 O
ATOM 25 O5' C A 142 64.454 117.565 34.925 1.00 36.87 O
TER
ATOM 1 O3' G B 170 75.064 127.911 29.931 1.00 46.39 O
ATOM 2 P A B 171 73.625 128.575 29.628 1.00 48.63 P
ATOM 3 OP1 A B 171 73.883 129.717 28.708 1.00 49.06 O
ATOM 4 OP2 A B 171 72.876 128.802 30.899 1.00 46.45 O
ATOM 5 O5' A B 171 72.849 127.457 28.804 1.00 47.38 O
ATOM 6 C5' A B 171 73.422 126.905 27.608 1.00 46.41 C
ATOM 7 C4' A B 171 72.488 125.890 26.999 1.00 45.19 C
ATOM 8 O4' A B 171 72.327 124.766 27.908 1.00 44.77 O
ATOM 9 C3' A B 171 71.065 126.354 26.743 1.00 43.73 C
ATOM 10 O3' A B 171 70.955 127.132 25.554 1.00 40.73 O
ATOM 11 C2' A B 171 70.325 125.025 26.658 1.00 45.34 C
ATOM 12 O2' A B 171 70.504 124.351 25.421 1.00 45.94 O
ATOM 13 C1' A B 171 71.018 124.234 27.772 1.00 44.53 C
ATOM 14 N9 A B 171 70.317 124.367 29.052 1.00 43.76 N
ATOM 15 C8 A B 171 70.654 125.134 30.139 1.00 42.30 C
ATOM 16 N7 A B 171 69.787 125.067 31.120 1.00 42.78 N
ATOM 17 C5 A B 171 68.816 124.191 30.652 1.00 41.79 C
ATOM 18 C6 A B 171 67.615 123.717 31.209 1.00 40.59 C
ATOM 19 N6 A B 171 67.156 124.075 32.410 1.00 39.04 N
ATOM 20 N1 A B 171 66.885 122.852 30.477 1.00 41.52 N
ATOM 21 C2 A B 171 67.328 122.497 29.271 1.00 41.54 C
ATOM 22 N3 A B 171 68.427 122.879 28.636 1.00 43.47 N
ATOM 23 C4 A B 171 69.138 123.740 29.388 1.00 43.29 C
ATOM 24 P G B 172 69.709 128.139 25.365 1.00 41.61 P
ATOM 25 OP1 G B 172 69.957 128.872 24.102 1.00 43.60 O
ATOM 26 OP2 G B 172 69.448 128.902 26.612 1.00 37.78 O
ATOM 27 O5' G B 172 68.461 127.182 25.108 1.00 42.13 O
TER
Atoms:
C2: (62.516,122.973,33.505)
OP1: (62.735,120.121,40.790)
OP2: (64.037,122.110,39.829)
C4: (64.012,124.407,34.548)
O5': (62.418,120.818,38.421)
C3': (62.139,119.390,35.904)
C1': (61.264,121.274,34.797)
O4': (60.710,121.233,36.104)
C5': (61.202,120.086,38.178)
P: (62.798,121.297,39.892)
O2: (61.932,122.562,32.495)
C4': (60.965,119.935,36.696)
C2': (61.843,119.891,34.501)
O2': (60.857,119.111,33.866)
N1: (62.262,122.361,34.735)
N3: (63.392,123.996,33.446)
N4: (64.849,125.436,34.441)
C6: (62.923,122.779,35.857)
C5: (63.796,123.788,35.808)
O3': (62.194,117.977,35.958)
OP1: (62.735,120.121,40.790)
OP2: (64.037,122.110,39.829)
C4: (64.012,124.407,34.548)
O5': (62.418,120.818,38.421)
C3': (62.139,119.390,35.904)
C1': (61.264,121.274,34.797)
O4': (60.710,121.233,36.104)
C5': (61.202,120.086,38.178)
P: (62.798,121.297,39.892)
O2: (61.932,122.562,32.495)
C4': (60.965,119.935,36.696)
C2': (61.843,119.891,34.501)
O2': (60.857,119.111,33.866)
N1: (62.262,122.361,34.735)
N3: (63.392,123.996,33.446)
N4: (64.849,125.436,34.441)
C6: (62.923,122.779,35.857)
C5: (63.796,123.788,35.808)
O3': (62.194,117.977,35.958)
OP1: (73.883,129.717,28.708)
OP2: (72.876,128.802,30.899)
C3': (71.065,126.354,26.743)
C1': (71.018,124.234,27.772)
C5': (73.422,126.905,27.608)
O4': (72.327,124.766,27.908)
C8: (70.654,125.134,30.139)
O2': (70.504,124.351,25.421)
C6: (67.615,123.717,31.209)
C5: (68.816,124.191,30.652)
C4: (69.138,123.740,29.388)
P: (73.625,128.575,29.628)
C4': (72.488,125.890,26.999)
C2': (70.325,125.025,26.658)
C2: (67.328,122.497,29.271)
N1: (66.885,122.852,30.477)
N3: (68.427,122.879,28.636)
N6: (67.156,124.075,32.410)
N7: (69.787,125.067,31.120)
N9: (70.317,124.367,29.052)
O5': (72.849,127.457,28.804)
O3': (70.955,127.132,25.554)
OP2: (72.876,128.802,30.899)
C3': (71.065,126.354,26.743)
C1': (71.018,124.234,27.772)
C5': (73.422,126.905,27.608)
O4': (72.327,124.766,27.908)
C8: (70.654,125.134,30.139)
O2': (70.504,124.351,25.421)
C6: (67.615,123.717,31.209)
C5: (68.816,124.191,30.652)
C4: (69.138,123.740,29.388)
P: (73.625,128.575,29.628)
C4': (72.488,125.890,26.999)
C2': (70.325,125.025,26.658)
C2: (67.328,122.497,29.271)
N1: (66.885,122.852,30.477)
N3: (68.427,122.879,28.636)
N6: (67.156,124.075,32.410)
N7: (69.787,125.067,31.120)
N9: (70.317,124.367,29.052)
O5': (72.849,127.457,28.804)
O3': (70.955,127.132,25.554)
Image (generated by PyMOL):