Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12101:12104
Extra
PDB:
ATOM 1 O3' C A2100 -14.416 26.553 62.499 1.00 54.06 O
ATOM 2 P U A2101 -14.351 27.239 61.060 1.00 50.20 P
ATOM 3 OP1 U A2101 -14.400 28.720 61.273 1.00 50.57 O
ATOM 4 OP2 U A2101 -15.386 26.600 60.212 1.00 50.39 O
ATOM 5 O5' U A2101 -12.907 26.821 60.552 1.00 49.74 O
ATOM 6 C5' U A2101 -11.844 27.762 60.537 1.00 49.68 C
ATOM 7 C4' U A2101 -10.698 27.297 59.691 1.00 49.32 C
ATOM 8 O4' U A2101 -10.443 25.891 59.913 1.00 48.91 O
ATOM 9 C3' U A2101 -10.890 27.378 58.196 1.00 49.49 C
ATOM 10 O3' U A2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 11 C2' U A2101 -9.782 26.451 57.715 1.00 49.02 C
ATOM 12 O2' U A2101 -8.509 27.060 57.891 1.00 48.83 O
ATOM 13 C1' U A2101 -9.899 25.330 58.737 1.00 48.71 C
ATOM 14 N1 U A2101 -10.783 24.249 58.271 1.00 48.73 N
ATOM 15 C2 U A2101 -10.179 23.355 57.433 1.00 48.44 C
ATOM 16 O2 U A2101 -9.037 23.467 57.125 1.00 48.20 O
ATOM 17 N3 U A2101 -10.923 22.317 56.967 1.00 48.45 N
ATOM 18 C4 U A2101 -12.250 22.092 57.248 1.00 48.73 C
ATOM 19 O4 U A2101 -12.796 21.098 56.739 1.00 48.71 O
ATOM 20 C5 U A2101 -12.830 23.073 58.127 1.00 49.02 C
ATOM 21 C6 U A2101 -12.107 24.094 58.596 1.00 49.02 C
ATOM 22 P A A2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 23 OP1 A A2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 24 OP2 A A2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 25 O5' A A2102 -11.204 28.710 55.218 1.00 49.72 O
TER
ATOM 1 O3' A B2103 -8.559 20.387 53.776 1.00 45.05 O
ATOM 2 P U B2104 -8.769 19.487 55.083 1.00 47.81 P
ATOM 3 OP1 U B2104 -8.672 18.086 54.665 1.00 47.57 O
ATOM 4 OP2 U B2104 -9.996 19.941 55.762 1.00 48.15 O
ATOM 5 O5' U B2104 -7.520 19.887 55.946 1.00 47.50 O
ATOM 6 C5' U B2104 -6.302 19.230 55.792 1.00 47.09 C
ATOM 7 C4' U B2104 -5.808 18.831 57.108 1.00 46.79 C
ATOM 8 O4' U B2104 -5.994 19.919 57.997 1.00 46.97 O
ATOM 9 C3' U B2104 -6.550 17.688 57.732 1.00 46.71 C
ATOM 10 O3' U B2104 -5.981 16.468 57.280 1.00 46.39 O
ATOM 11 C2' U B2104 -6.411 17.947 59.238 1.00 46.61 C
ATOM 12 O2' U B2104 -5.270 17.287 59.754 1.00 46.19 O
ATOM 13 C1' U B2104 -6.141 19.449 59.300 1.00 46.82 C
ATOM 14 N1 U B2104 -7.186 20.240 59.927 1.00 47.19 N
ATOM 15 C2 U B2104 -6.866 20.970 61.031 1.00 47.19 C
ATOM 16 O2 U B2104 -5.805 20.900 61.604 1.00 46.90 O
ATOM 17 N3 U B2104 -7.858 21.791 61.470 1.00 47.58 N
ATOM 18 C4 U B2104 -9.097 21.973 60.904 1.00 47.96 C
ATOM 19 O4 U B2104 -9.888 22.736 61.416 1.00 48.29 O
ATOM 20 C5 U B2104 -9.358 21.232 59.732 1.00 47.94 C
ATOM 21 C6 U B2104 -8.377 20.440 59.289 1.00 47.56 C
ATOM 22 P U B2105 -6.574 15.011 57.645 1.00 49.33 P
ATOM 23 OP1 U B2105 -6.688 14.272 56.363 1.00 49.35 O
ATOM 24 OP2 U B2105 -7.782 15.201 58.497 1.00 49.59 O
ATOM 25 O5' U B2105 -5.411 14.389 58.527 1.00 48.89 O
TER
ATOM 2 P U A2101 -14.351 27.239 61.060 1.00 50.20 P
ATOM 3 OP1 U A2101 -14.400 28.720 61.273 1.00 50.57 O
ATOM 4 OP2 U A2101 -15.386 26.600 60.212 1.00 50.39 O
ATOM 5 O5' U A2101 -12.907 26.821 60.552 1.00 49.74 O
ATOM 6 C5' U A2101 -11.844 27.762 60.537 1.00 49.68 C
ATOM 7 C4' U A2101 -10.698 27.297 59.691 1.00 49.32 C
ATOM 8 O4' U A2101 -10.443 25.891 59.913 1.00 48.91 O
ATOM 9 C3' U A2101 -10.890 27.378 58.196 1.00 49.49 C
ATOM 10 O3' U A2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 11 C2' U A2101 -9.782 26.451 57.715 1.00 49.02 C
ATOM 12 O2' U A2101 -8.509 27.060 57.891 1.00 48.83 O
ATOM 13 C1' U A2101 -9.899 25.330 58.737 1.00 48.71 C
ATOM 14 N1 U A2101 -10.783 24.249 58.271 1.00 48.73 N
ATOM 15 C2 U A2101 -10.179 23.355 57.433 1.00 48.44 C
ATOM 16 O2 U A2101 -9.037 23.467 57.125 1.00 48.20 O
ATOM 17 N3 U A2101 -10.923 22.317 56.967 1.00 48.45 N
ATOM 18 C4 U A2101 -12.250 22.092 57.248 1.00 48.73 C
ATOM 19 O4 U A2101 -12.796 21.098 56.739 1.00 48.71 O
ATOM 20 C5 U A2101 -12.830 23.073 58.127 1.00 49.02 C
ATOM 21 C6 U A2101 -12.107 24.094 58.596 1.00 49.02 C
ATOM 22 P A A2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 23 OP1 A A2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 24 OP2 A A2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 25 O5' A A2102 -11.204 28.710 55.218 1.00 49.72 O
TER
ATOM 1 O3' A B2103 -8.559 20.387 53.776 1.00 45.05 O
ATOM 2 P U B2104 -8.769 19.487 55.083 1.00 47.81 P
ATOM 3 OP1 U B2104 -8.672 18.086 54.665 1.00 47.57 O
ATOM 4 OP2 U B2104 -9.996 19.941 55.762 1.00 48.15 O
ATOM 5 O5' U B2104 -7.520 19.887 55.946 1.00 47.50 O
ATOM 6 C5' U B2104 -6.302 19.230 55.792 1.00 47.09 C
ATOM 7 C4' U B2104 -5.808 18.831 57.108 1.00 46.79 C
ATOM 8 O4' U B2104 -5.994 19.919 57.997 1.00 46.97 O
ATOM 9 C3' U B2104 -6.550 17.688 57.732 1.00 46.71 C
ATOM 10 O3' U B2104 -5.981 16.468 57.280 1.00 46.39 O
ATOM 11 C2' U B2104 -6.411 17.947 59.238 1.00 46.61 C
ATOM 12 O2' U B2104 -5.270 17.287 59.754 1.00 46.19 O
ATOM 13 C1' U B2104 -6.141 19.449 59.300 1.00 46.82 C
ATOM 14 N1 U B2104 -7.186 20.240 59.927 1.00 47.19 N
ATOM 15 C2 U B2104 -6.866 20.970 61.031 1.00 47.19 C
ATOM 16 O2 U B2104 -5.805 20.900 61.604 1.00 46.90 O
ATOM 17 N3 U B2104 -7.858 21.791 61.470 1.00 47.58 N
ATOM 18 C4 U B2104 -9.097 21.973 60.904 1.00 47.96 C
ATOM 19 O4 U B2104 -9.888 22.736 61.416 1.00 48.29 O
ATOM 20 C5 U B2104 -9.358 21.232 59.732 1.00 47.94 C
ATOM 21 C6 U B2104 -8.377 20.440 59.289 1.00 47.56 C
ATOM 22 P U B2105 -6.574 15.011 57.645 1.00 49.33 P
ATOM 23 OP1 U B2105 -6.688 14.272 56.363 1.00 49.35 O
ATOM 24 OP2 U B2105 -7.782 15.201 58.497 1.00 49.59 O
ATOM 25 O5' U B2105 -5.411 14.389 58.527 1.00 48.89 O
TER
Atoms:
C4: (-12.250,22.092,57.248)
N3: (-10.923,22.317,56.967)
OP1: (-14.400,28.720,61.273)
OP2: (-15.386,26.600,60.212)
C2: (-10.179,23.355,57.433)
C1': (-9.899,25.330,58.737)
C3': (-10.890,27.378,58.196)
O5': (-12.907,26.821,60.552)
O4': (-10.443,25.891,59.913)
C5': (-11.844,27.762,60.537)
P: (-14.351,27.239,61.060)
C4': (-10.698,27.297,59.691)
C2': (-9.782,26.451,57.715)
O2': (-8.509,27.060,57.891)
N1: (-10.783,24.249,58.271)
O4: (-12.796,21.098,56.739)
O2: (-9.037,23.467,57.125)
C6: (-12.107,24.094,58.596)
C5: (-12.830,23.073,58.127)
O3': (-10.785,28.698,57.705)
N3: (-10.923,22.317,56.967)
OP1: (-14.400,28.720,61.273)
OP2: (-15.386,26.600,60.212)
C2: (-10.179,23.355,57.433)
C1': (-9.899,25.330,58.737)
C3': (-10.890,27.378,58.196)
O5': (-12.907,26.821,60.552)
O4': (-10.443,25.891,59.913)
C5': (-11.844,27.762,60.537)
P: (-14.351,27.239,61.060)
C4': (-10.698,27.297,59.691)
C2': (-9.782,26.451,57.715)
O2': (-8.509,27.060,57.891)
N1: (-10.783,24.249,58.271)
O4: (-12.796,21.098,56.739)
O2: (-9.037,23.467,57.125)
C6: (-12.107,24.094,58.596)
C5: (-12.830,23.073,58.127)
O3': (-10.785,28.698,57.705)
C4: (-9.097,21.973,60.904)
N3: (-7.858,21.791,61.470)
OP1: (-8.672,18.086,54.665)
OP2: (-9.996,19.941,55.762)
C2: (-6.866,20.970,61.031)
C1': (-6.141,19.449,59.300)
C3': (-6.550,17.688,57.732)
O5': (-7.520,19.887,55.946)
O4': (-5.994,19.919,57.997)
C5': (-6.302,19.230,55.792)
P: (-8.769,19.487,55.083)
C4': (-5.808,18.831,57.108)
C2': (-6.411,17.947,59.238)
O2': (-5.270,17.287,59.754)
N1: (-7.186,20.240,59.927)
O4: (-9.888,22.736,61.416)
O2: (-5.805,20.900,61.604)
C6: (-8.377,20.440,59.289)
C5: (-9.358,21.232,59.732)
O3': (-5.981,16.468,57.280)
N3: (-7.858,21.791,61.470)
OP1: (-8.672,18.086,54.665)
OP2: (-9.996,19.941,55.762)
C2: (-6.866,20.970,61.031)
C1': (-6.141,19.449,59.300)
C3': (-6.550,17.688,57.732)
O5': (-7.520,19.887,55.946)
O4': (-5.994,19.919,57.997)
C5': (-6.302,19.230,55.792)
P: (-8.769,19.487,55.083)
C4': (-5.808,18.831,57.108)
C2': (-6.411,17.947,59.238)
O2': (-5.270,17.287,59.754)
N1: (-7.186,20.240,59.927)
O4: (-9.888,22.736,61.416)
O2: (-5.805,20.900,61.604)
C6: (-8.377,20.440,59.289)
C5: (-9.358,21.232,59.732)
O3': (-5.981,16.468,57.280)
Image (generated by PyMOL):