Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0141:0171
Extra
PDB:
ATOM 1 O3' A A 140 61.786 122.694 40.614 1.00 54.49 O
ATOM 2 P C A 141 62.996 121.762 40.145 1.00 54.13 P
ATOM 3 OP1 C A 141 63.027 120.583 41.038 1.00 53.45 O
ATOM 4 OP2 C A 141 64.206 122.608 40.000 1.00 53.85 O
ATOM 5 O5' C A 141 62.535 121.257 38.708 1.00 55.45 O
ATOM 6 C5' C A 141 61.345 120.453 38.551 1.00 55.05 C
ATOM 7 C4' C A 141 61.071 120.213 37.087 1.00 54.30 C
ATOM 8 O4' C A 141 60.751 121.478 36.455 1.00 54.51 O
ATOM 9 C3' C A 141 62.259 119.686 36.294 1.00 54.23 C
ATOM 10 O3' C A 141 62.409 118.272 36.380 1.00 52.39 O
ATOM 11 C2' C A 141 61.934 120.143 34.883 1.00 55.00 C
ATOM 12 O2' C A 141 60.979 119.308 34.267 1.00 55.88 O
ATOM 13 C1' C A 141 61.323 121.518 35.155 1.00 56.31 C
ATOM 14 N1 C A 141 62.316 122.615 35.109 1.00 58.72 N
ATOM 15 C2 C A 141 62.482 123.318 33.918 1.00 58.79 C
ATOM 16 O2 C A 141 61.817 122.988 32.927 1.00 59.67 O
ATOM 17 N3 C A 141 63.361 124.342 33.874 1.00 58.58 N
ATOM 18 C4 C A 141 64.059 124.671 34.956 1.00 57.64 C
ATOM 19 N4 C A 141 64.889 125.703 34.866 1.00 58.85 N
ATOM 20 C5 C A 141 63.931 123.960 36.177 1.00 57.70 C
ATOM 21 C6 C A 141 63.058 122.948 36.211 1.00 59.40 C
ATOM 22 P C A 142 63.883 117.635 36.430 1.00 51.05 P
ATOM 23 OP1 C A 142 63.792 116.153 36.356 1.00 50.71 O
ATOM 24 OP2 C A 142 64.572 118.271 37.579 1.00 50.70 O
ATOM 25 O5' C A 142 64.568 118.151 35.088 1.00 49.98 O
TER
ATOM 1 O3' G B 170 75.362 128.227 30.217 1.00 58.87 O
ATOM 2 P A B 171 73.916 128.884 29.902 1.00 60.12 P
ATOM 3 OP1 A B 171 74.162 130.009 28.961 1.00 58.95 O
ATOM 4 OP2 A B 171 73.164 129.135 31.172 1.00 58.40 O
ATOM 5 O5' A B 171 73.144 127.749 29.099 1.00 57.27 O
ATOM 6 C5' A B 171 73.714 127.184 27.914 1.00 56.62 C
ATOM 7 C4' A B 171 72.756 126.200 27.296 1.00 56.95 C
ATOM 8 O4' A B 171 72.559 125.071 28.189 1.00 56.11 O
ATOM 9 C3' A B 171 71.349 126.714 27.055 1.00 56.63 C
ATOM 10 O3' A B 171 71.253 127.509 25.881 1.00 55.68 O
ATOM 11 C2' A B 171 70.563 125.416 26.951 1.00 58.16 C
ATOM 12 O2' A B 171 70.706 124.772 25.697 1.00 60.22 O
ATOM 13 C1' A B 171 71.232 124.581 28.046 1.00 57.87 C
ATOM 14 N9 A B 171 70.524 124.733 29.321 1.00 58.40 N
ATOM 15 C8 A B 171 70.826 125.548 30.385 1.00 58.33 C
ATOM 16 N7 A B 171 69.945 125.497 31.355 1.00 58.39 N
ATOM 17 C5 A B 171 69.007 124.578 30.907 1.00 56.97 C
ATOM 18 C6 A B 171 67.818 124.092 31.468 1.00 55.61 C
ATOM 19 N6 A B 171 67.334 124.487 32.643 1.00 54.17 N
ATOM 20 N1 A B 171 67.124 123.177 30.766 1.00 56.72 N
ATOM 21 C2 A B 171 67.593 122.786 29.580 1.00 57.99 C
ATOM 22 N3 A B 171 68.688 123.175 28.941 1.00 58.72 N
ATOM 23 C4 A B 171 69.360 124.085 29.666 1.00 58.13 C
ATOM 24 P G B 172 69.996 128.494 25.687 1.00 57.20 P
ATOM 25 OP1 G B 172 70.237 129.216 24.413 1.00 57.70 O
ATOM 26 OP2 G B 172 69.764 129.266 26.936 1.00 53.86 O
ATOM 27 O5' G B 172 68.755 127.513 25.470 1.00 56.89 O
TER
ATOM 2 P C A 141 62.996 121.762 40.145 1.00 54.13 P
ATOM 3 OP1 C A 141 63.027 120.583 41.038 1.00 53.45 O
ATOM 4 OP2 C A 141 64.206 122.608 40.000 1.00 53.85 O
ATOM 5 O5' C A 141 62.535 121.257 38.708 1.00 55.45 O
ATOM 6 C5' C A 141 61.345 120.453 38.551 1.00 55.05 C
ATOM 7 C4' C A 141 61.071 120.213 37.087 1.00 54.30 C
ATOM 8 O4' C A 141 60.751 121.478 36.455 1.00 54.51 O
ATOM 9 C3' C A 141 62.259 119.686 36.294 1.00 54.23 C
ATOM 10 O3' C A 141 62.409 118.272 36.380 1.00 52.39 O
ATOM 11 C2' C A 141 61.934 120.143 34.883 1.00 55.00 C
ATOM 12 O2' C A 141 60.979 119.308 34.267 1.00 55.88 O
ATOM 13 C1' C A 141 61.323 121.518 35.155 1.00 56.31 C
ATOM 14 N1 C A 141 62.316 122.615 35.109 1.00 58.72 N
ATOM 15 C2 C A 141 62.482 123.318 33.918 1.00 58.79 C
ATOM 16 O2 C A 141 61.817 122.988 32.927 1.00 59.67 O
ATOM 17 N3 C A 141 63.361 124.342 33.874 1.00 58.58 N
ATOM 18 C4 C A 141 64.059 124.671 34.956 1.00 57.64 C
ATOM 19 N4 C A 141 64.889 125.703 34.866 1.00 58.85 N
ATOM 20 C5 C A 141 63.931 123.960 36.177 1.00 57.70 C
ATOM 21 C6 C A 141 63.058 122.948 36.211 1.00 59.40 C
ATOM 22 P C A 142 63.883 117.635 36.430 1.00 51.05 P
ATOM 23 OP1 C A 142 63.792 116.153 36.356 1.00 50.71 O
ATOM 24 OP2 C A 142 64.572 118.271 37.579 1.00 50.70 O
ATOM 25 O5' C A 142 64.568 118.151 35.088 1.00 49.98 O
TER
ATOM 1 O3' G B 170 75.362 128.227 30.217 1.00 58.87 O
ATOM 2 P A B 171 73.916 128.884 29.902 1.00 60.12 P
ATOM 3 OP1 A B 171 74.162 130.009 28.961 1.00 58.95 O
ATOM 4 OP2 A B 171 73.164 129.135 31.172 1.00 58.40 O
ATOM 5 O5' A B 171 73.144 127.749 29.099 1.00 57.27 O
ATOM 6 C5' A B 171 73.714 127.184 27.914 1.00 56.62 C
ATOM 7 C4' A B 171 72.756 126.200 27.296 1.00 56.95 C
ATOM 8 O4' A B 171 72.559 125.071 28.189 1.00 56.11 O
ATOM 9 C3' A B 171 71.349 126.714 27.055 1.00 56.63 C
ATOM 10 O3' A B 171 71.253 127.509 25.881 1.00 55.68 O
ATOM 11 C2' A B 171 70.563 125.416 26.951 1.00 58.16 C
ATOM 12 O2' A B 171 70.706 124.772 25.697 1.00 60.22 O
ATOM 13 C1' A B 171 71.232 124.581 28.046 1.00 57.87 C
ATOM 14 N9 A B 171 70.524 124.733 29.321 1.00 58.40 N
ATOM 15 C8 A B 171 70.826 125.548 30.385 1.00 58.33 C
ATOM 16 N7 A B 171 69.945 125.497 31.355 1.00 58.39 N
ATOM 17 C5 A B 171 69.007 124.578 30.907 1.00 56.97 C
ATOM 18 C6 A B 171 67.818 124.092 31.468 1.00 55.61 C
ATOM 19 N6 A B 171 67.334 124.487 32.643 1.00 54.17 N
ATOM 20 N1 A B 171 67.124 123.177 30.766 1.00 56.72 N
ATOM 21 C2 A B 171 67.593 122.786 29.580 1.00 57.99 C
ATOM 22 N3 A B 171 68.688 123.175 28.941 1.00 58.72 N
ATOM 23 C4 A B 171 69.360 124.085 29.666 1.00 58.13 C
ATOM 24 P G B 172 69.996 128.494 25.687 1.00 57.20 P
ATOM 25 OP1 G B 172 70.237 129.216 24.413 1.00 57.70 O
ATOM 26 OP2 G B 172 69.764 129.266 26.936 1.00 53.86 O
ATOM 27 O5' G B 172 68.755 127.513 25.470 1.00 56.89 O
TER
Atoms:
C2: (62.482,123.318,33.918)
OP1: (63.027,120.583,41.038)
OP2: (64.206,122.608,40.000)
C4: (64.059,124.671,34.956)
O5': (62.535,121.257,38.708)
C3': (62.259,119.686,36.294)
C1': (61.323,121.518,35.155)
O4': (60.751,121.478,36.455)
C5': (61.345,120.453,38.551)
P: (62.996,121.762,40.145)
O2: (61.817,122.988,32.927)
C4': (61.071,120.213,37.087)
C2': (61.934,120.143,34.883)
O2': (60.979,119.308,34.267)
N1: (62.316,122.615,35.109)
N3: (63.361,124.342,33.874)
N4: (64.889,125.703,34.866)
C6: (63.058,122.948,36.211)
C5: (63.931,123.960,36.177)
O3': (62.409,118.272,36.380)
OP1: (63.027,120.583,41.038)
OP2: (64.206,122.608,40.000)
C4: (64.059,124.671,34.956)
O5': (62.535,121.257,38.708)
C3': (62.259,119.686,36.294)
C1': (61.323,121.518,35.155)
O4': (60.751,121.478,36.455)
C5': (61.345,120.453,38.551)
P: (62.996,121.762,40.145)
O2: (61.817,122.988,32.927)
C4': (61.071,120.213,37.087)
C2': (61.934,120.143,34.883)
O2': (60.979,119.308,34.267)
N1: (62.316,122.615,35.109)
N3: (63.361,124.342,33.874)
N4: (64.889,125.703,34.866)
C6: (63.058,122.948,36.211)
C5: (63.931,123.960,36.177)
O3': (62.409,118.272,36.380)
OP1: (74.162,130.009,28.961)
OP2: (73.164,129.135,31.172)
C3': (71.349,126.714,27.055)
C1': (71.232,124.581,28.046)
C5': (73.714,127.184,27.914)
O4': (72.559,125.071,28.189)
C8: (70.826,125.548,30.385)
O2': (70.706,124.772,25.697)
C6: (67.818,124.092,31.468)
C5: (69.007,124.578,30.907)
C4: (69.360,124.085,29.666)
P: (73.916,128.884,29.902)
C4': (72.756,126.200,27.296)
C2': (70.563,125.416,26.951)
C2: (67.593,122.786,29.580)
N1: (67.124,123.177,30.766)
N3: (68.688,123.175,28.941)
N6: (67.334,124.487,32.643)
N7: (69.945,125.497,31.355)
N9: (70.524,124.733,29.321)
O5': (73.144,127.749,29.099)
O3': (71.253,127.509,25.881)
OP2: (73.164,129.135,31.172)
C3': (71.349,126.714,27.055)
C1': (71.232,124.581,28.046)
C5': (73.714,127.184,27.914)
O4': (72.559,125.071,28.189)
C8: (70.826,125.548,30.385)
O2': (70.706,124.772,25.697)
C6: (67.818,124.092,31.468)
C5: (69.007,124.578,30.907)
C4: (69.360,124.085,29.666)
P: (73.916,128.884,29.902)
C4': (72.756,126.200,27.296)
C2': (70.563,125.416,26.951)
C2: (67.593,122.786,29.580)
N1: (67.124,123.177,30.766)
N3: (68.688,123.175,28.941)
N6: (67.334,124.487,32.643)
N7: (69.945,125.497,31.355)
N9: (70.524,124.733,29.321)
O5': (73.144,127.749,29.099)
O3': (71.253,127.509,25.881)
Image (generated by PyMOL):