Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0141:0171
Extra
PDB:
ATOM 1 O3' A A 140 61.381 122.411 40.238 1.00 43.94 O
ATOM 2 P C A 141 62.618 121.454 39.888 1.00 46.11 P
ATOM 3 OP1 C A 141 62.529 120.287 40.802 1.00 43.84 O
ATOM 4 OP2 C A 141 63.865 122.272 39.852 1.00 44.97 O
ATOM 5 O5' C A 141 62.299 120.942 38.412 1.00 45.12 O
ATOM 6 C5' C A 141 61.103 120.183 38.137 1.00 44.06 C
ATOM 7 C4' C A 141 60.914 120.016 36.649 1.00 41.20 C
ATOM 8 O4' C A 141 60.669 121.307 36.039 1.00 41.15 O
ATOM 9 C3' C A 141 62.116 119.473 35.902 1.00 40.39 C
ATOM 10 O3' C A 141 62.165 118.056 35.971 1.00 40.05 O
ATOM 11 C2' C A 141 61.861 119.959 34.487 1.00 40.77 C
ATOM 12 O2' C A 141 60.920 119.148 33.820 1.00 41.60 O
ATOM 13 C1' C A 141 61.253 121.340 34.748 1.00 41.85 C
ATOM 14 N1 C A 141 62.228 122.451 34.691 1.00 44.46 N
ATOM 15 C2 C A 141 62.584 122.973 33.442 1.00 44.93 C
ATOM 16 O2 C A 141 62.072 122.498 32.419 1.00 46.32 O
ATOM 17 N3 C A 141 63.475 123.985 33.380 1.00 44.67 N
ATOM 18 C4 C A 141 64.003 124.480 34.495 1.00 42.98 C
ATOM 19 N4 C A 141 64.874 125.476 34.373 1.00 44.23 N
ATOM 20 C5 C A 141 63.661 123.976 35.777 1.00 43.02 C
ATOM 21 C6 C A 141 62.781 122.970 35.831 1.00 44.49 C
ATOM 22 P C A 142 63.581 117.313 36.111 1.00 40.61 P
ATOM 23 OP1 C A 142 63.333 115.854 36.025 1.00 42.04 O
ATOM 24 OP2 C A 142 64.287 117.868 37.291 1.00 38.43 O
ATOM 25 O5' C A 142 64.372 117.750 34.804 1.00 38.56 O
TER
ATOM 1 O3' G B 170 75.059 127.991 29.866 1.00 48.77 O
ATOM 2 P A B 171 73.631 128.673 29.533 1.00 51.52 P
ATOM 3 OP1 A B 171 73.910 129.792 28.587 1.00 49.50 O
ATOM 4 OP2 A B 171 72.879 128.937 30.797 1.00 50.51 O
ATOM 5 O5' A B 171 72.829 127.552 28.738 1.00 49.63 O
ATOM 6 C5' A B 171 73.394 126.939 27.571 1.00 49.36 C
ATOM 7 C4' A B 171 72.431 125.932 26.997 1.00 49.58 C
ATOM 8 O4' A B 171 72.217 124.856 27.955 1.00 48.87 O
ATOM 9 C3' A B 171 71.028 126.447 26.724 1.00 48.93 C
ATOM 10 O3' A B 171 70.940 127.190 25.514 1.00 46.27 O
ATOM 11 C2' A B 171 70.223 125.154 26.692 1.00 49.92 C
ATOM 12 O2' A B 171 70.348 124.436 25.474 1.00 51.50 O
ATOM 13 C1' A B 171 70.890 124.363 27.822 1.00 49.12 C
ATOM 14 N9 A B 171 70.189 124.513 29.100 1.00 47.95 N
ATOM 15 C8 A B 171 70.542 125.274 30.188 1.00 46.84 C
ATOM 16 N7 A B 171 69.685 125.206 31.180 1.00 47.04 N
ATOM 17 C5 A B 171 68.701 124.340 30.716 1.00 46.19 C
ATOM 18 C6 A B 171 67.504 123.866 31.287 1.00 43.98 C
ATOM 19 N6 A B 171 67.074 124.206 32.500 1.00 43.23 N
ATOM 20 N1 A B 171 66.752 123.023 30.556 1.00 43.12 N
ATOM 21 C2 A B 171 67.172 122.681 29.340 1.00 43.65 C
ATOM 22 N3 A B 171 68.267 123.058 28.691 1.00 45.93 N
ATOM 23 C4 A B 171 69.001 123.901 29.441 1.00 47.34 C
ATOM 24 P G B 172 69.746 128.253 25.316 1.00 47.33 P
ATOM 25 OP1 G B 172 70.053 128.988 24.068 1.00 48.25 O
ATOM 26 OP2 G B 172 69.520 129.009 26.578 1.00 44.58 O
ATOM 27 O5' G B 172 68.447 127.369 25.045 1.00 46.09 O
TER
ATOM 2 P C A 141 62.618 121.454 39.888 1.00 46.11 P
ATOM 3 OP1 C A 141 62.529 120.287 40.802 1.00 43.84 O
ATOM 4 OP2 C A 141 63.865 122.272 39.852 1.00 44.97 O
ATOM 5 O5' C A 141 62.299 120.942 38.412 1.00 45.12 O
ATOM 6 C5' C A 141 61.103 120.183 38.137 1.00 44.06 C
ATOM 7 C4' C A 141 60.914 120.016 36.649 1.00 41.20 C
ATOM 8 O4' C A 141 60.669 121.307 36.039 1.00 41.15 O
ATOM 9 C3' C A 141 62.116 119.473 35.902 1.00 40.39 C
ATOM 10 O3' C A 141 62.165 118.056 35.971 1.00 40.05 O
ATOM 11 C2' C A 141 61.861 119.959 34.487 1.00 40.77 C
ATOM 12 O2' C A 141 60.920 119.148 33.820 1.00 41.60 O
ATOM 13 C1' C A 141 61.253 121.340 34.748 1.00 41.85 C
ATOM 14 N1 C A 141 62.228 122.451 34.691 1.00 44.46 N
ATOM 15 C2 C A 141 62.584 122.973 33.442 1.00 44.93 C
ATOM 16 O2 C A 141 62.072 122.498 32.419 1.00 46.32 O
ATOM 17 N3 C A 141 63.475 123.985 33.380 1.00 44.67 N
ATOM 18 C4 C A 141 64.003 124.480 34.495 1.00 42.98 C
ATOM 19 N4 C A 141 64.874 125.476 34.373 1.00 44.23 N
ATOM 20 C5 C A 141 63.661 123.976 35.777 1.00 43.02 C
ATOM 21 C6 C A 141 62.781 122.970 35.831 1.00 44.49 C
ATOM 22 P C A 142 63.581 117.313 36.111 1.00 40.61 P
ATOM 23 OP1 C A 142 63.333 115.854 36.025 1.00 42.04 O
ATOM 24 OP2 C A 142 64.287 117.868 37.291 1.00 38.43 O
ATOM 25 O5' C A 142 64.372 117.750 34.804 1.00 38.56 O
TER
ATOM 1 O3' G B 170 75.059 127.991 29.866 1.00 48.77 O
ATOM 2 P A B 171 73.631 128.673 29.533 1.00 51.52 P
ATOM 3 OP1 A B 171 73.910 129.792 28.587 1.00 49.50 O
ATOM 4 OP2 A B 171 72.879 128.937 30.797 1.00 50.51 O
ATOM 5 O5' A B 171 72.829 127.552 28.738 1.00 49.63 O
ATOM 6 C5' A B 171 73.394 126.939 27.571 1.00 49.36 C
ATOM 7 C4' A B 171 72.431 125.932 26.997 1.00 49.58 C
ATOM 8 O4' A B 171 72.217 124.856 27.955 1.00 48.87 O
ATOM 9 C3' A B 171 71.028 126.447 26.724 1.00 48.93 C
ATOM 10 O3' A B 171 70.940 127.190 25.514 1.00 46.27 O
ATOM 11 C2' A B 171 70.223 125.154 26.692 1.00 49.92 C
ATOM 12 O2' A B 171 70.348 124.436 25.474 1.00 51.50 O
ATOM 13 C1' A B 171 70.890 124.363 27.822 1.00 49.12 C
ATOM 14 N9 A B 171 70.189 124.513 29.100 1.00 47.95 N
ATOM 15 C8 A B 171 70.542 125.274 30.188 1.00 46.84 C
ATOM 16 N7 A B 171 69.685 125.206 31.180 1.00 47.04 N
ATOM 17 C5 A B 171 68.701 124.340 30.716 1.00 46.19 C
ATOM 18 C6 A B 171 67.504 123.866 31.287 1.00 43.98 C
ATOM 19 N6 A B 171 67.074 124.206 32.500 1.00 43.23 N
ATOM 20 N1 A B 171 66.752 123.023 30.556 1.00 43.12 N
ATOM 21 C2 A B 171 67.172 122.681 29.340 1.00 43.65 C
ATOM 22 N3 A B 171 68.267 123.058 28.691 1.00 45.93 N
ATOM 23 C4 A B 171 69.001 123.901 29.441 1.00 47.34 C
ATOM 24 P G B 172 69.746 128.253 25.316 1.00 47.33 P
ATOM 25 OP1 G B 172 70.053 128.988 24.068 1.00 48.25 O
ATOM 26 OP2 G B 172 69.520 129.009 26.578 1.00 44.58 O
ATOM 27 O5' G B 172 68.447 127.369 25.045 1.00 46.09 O
TER
Atoms:
C2: (62.584,122.973,33.442)
OP1: (62.529,120.287,40.802)
OP2: (63.865,122.272,39.852)
C4: (64.003,124.480,34.495)
O5': (62.299,120.942,38.412)
C3': (62.116,119.473,35.902)
C1': (61.253,121.340,34.748)
O4': (60.669,121.307,36.039)
C5': (61.103,120.183,38.137)
P: (62.618,121.454,39.888)
O2: (62.072,122.498,32.419)
C4': (60.914,120.016,36.649)
C2': (61.861,119.959,34.487)
O2': (60.920,119.148,33.820)
N1: (62.228,122.451,34.691)
N3: (63.475,123.985,33.380)
N4: (64.874,125.476,34.373)
C6: (62.781,122.970,35.831)
C5: (63.661,123.976,35.777)
O3': (62.165,118.056,35.971)
OP1: (62.529,120.287,40.802)
OP2: (63.865,122.272,39.852)
C4: (64.003,124.480,34.495)
O5': (62.299,120.942,38.412)
C3': (62.116,119.473,35.902)
C1': (61.253,121.340,34.748)
O4': (60.669,121.307,36.039)
C5': (61.103,120.183,38.137)
P: (62.618,121.454,39.888)
O2: (62.072,122.498,32.419)
C4': (60.914,120.016,36.649)
C2': (61.861,119.959,34.487)
O2': (60.920,119.148,33.820)
N1: (62.228,122.451,34.691)
N3: (63.475,123.985,33.380)
N4: (64.874,125.476,34.373)
C6: (62.781,122.970,35.831)
C5: (63.661,123.976,35.777)
O3': (62.165,118.056,35.971)
OP1: (73.910,129.792,28.587)
OP2: (72.879,128.937,30.797)
C3': (71.028,126.447,26.724)
C1': (70.890,124.363,27.822)
C5': (73.394,126.939,27.571)
O4': (72.217,124.856,27.955)
C8: (70.542,125.274,30.188)
O2': (70.348,124.436,25.474)
C6: (67.504,123.866,31.287)
C5: (68.701,124.340,30.716)
C4: (69.001,123.901,29.441)
P: (73.631,128.673,29.533)
C4': (72.431,125.932,26.997)
C2': (70.223,125.154,26.692)
C2: (67.172,122.681,29.340)
N1: (66.752,123.023,30.556)
N3: (68.267,123.058,28.691)
N6: (67.074,124.206,32.500)
N7: (69.685,125.206,31.180)
N9: (70.189,124.513,29.100)
O5': (72.829,127.552,28.738)
O3': (70.940,127.190,25.514)
OP2: (72.879,128.937,30.797)
C3': (71.028,126.447,26.724)
C1': (70.890,124.363,27.822)
C5': (73.394,126.939,27.571)
O4': (72.217,124.856,27.955)
C8: (70.542,125.274,30.188)
O2': (70.348,124.436,25.474)
C6: (67.504,123.866,31.287)
C5: (68.701,124.340,30.716)
C4: (69.001,123.901,29.441)
P: (73.631,128.673,29.533)
C4': (72.431,125.932,26.997)
C2': (70.223,125.154,26.692)
C2: (67.172,122.681,29.340)
N1: (66.752,123.023,30.556)
N3: (68.267,123.058,28.691)
N6: (67.074,124.206,32.500)
N7: (69.685,125.206,31.180)
N9: (70.189,124.513,29.100)
O5': (72.829,127.552,28.738)
O3': (70.940,127.190,25.514)
Image (generated by PyMOL):