Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12684:12687
Extra
PDB:
ATOM 1 O3' C A2683 -1.881 34.144 41.674 1.00 53.52 O
ATOM 2 P U A2684 -2.010 34.101 40.095 1.00 55.25 P
ATOM 3 OP1 U A2684 -2.116 35.506 39.637 1.00 55.75 O
ATOM 4 OP2 U A2684 -3.092 33.134 39.753 1.00 55.31 O
ATOM 5 O5' U A2684 -0.627 33.489 39.676 1.00 54.83 O
ATOM 6 C5' U A2684 0.592 34.157 39.949 1.00 54.69 C
ATOM 7 C4' U A2684 1.750 33.313 39.521 1.00 54.28 C
ATOM 8 O4' U A2684 1.641 32.012 40.141 1.00 53.84 O
ATOM 9 C3' U A2684 1.823 33.029 38.035 1.00 54.46 C
ATOM 10 O3' U A2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 11 C2' U A2684 2.563 31.711 37.974 1.00 53.96 C
ATOM 12 O2' U A2684 3.953 31.930 37.983 1.00 53.72 O
ATOM 13 C1' U A2684 2.168 31.035 39.296 1.00 53.63 C
ATOM 14 N1 U A2684 1.162 30.005 39.082 1.00 53.63 N
ATOM 15 C2 U A2684 1.652 28.838 38.559 1.00 53.33 C
ATOM 16 O2 U A2684 2.807 28.608 38.357 1.00 53.06 O
ATOM 17 N3 U A2684 0.736 27.886 38.266 1.00 53.36 N
ATOM 18 C4 U A2684 -0.619 27.955 38.433 1.00 53.66 C
ATOM 19 O4 U A2684 -1.244 26.955 38.110 1.00 53.63 O
ATOM 20 C5 U A2684 -1.076 29.204 38.972 1.00 53.96 C
ATOM 21 C6 U A2684 -0.191 30.172 39.268 1.00 53.94 C
ATOM 22 P A A2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 23 OP1 A A2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 24 OP2 A A2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 25 O5' A A2685 2.746 33.306 34.983 1.00 52.23 O
TER
ATOM 1 O3' A B2686 3.764 24.442 36.232 1.00 43.88 O
ATOM 2 P U B2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 3 OP1 U B2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 4 OP2 U B2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 5 O5' U B2687 2.481 24.262 38.354 1.00 50.04 O
ATOM 6 C5' U B2687 3.080 23.158 38.996 1.00 49.56 C
ATOM 7 C4' U B2687 4.534 23.402 39.327 1.00 49.25 C
ATOM 8 O4' U B2687 4.798 24.820 39.344 1.00 49.49 O
ATOM 9 C3' U B2687 4.948 22.871 40.698 1.00 48.81 C
ATOM 10 O3' U B2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 11 C2' U B2687 4.989 24.099 41.561 1.00 48.91 C
ATOM 12 O2' U B2687 5.908 23.989 42.623 1.00 48.53 O
ATOM 13 C1' U B2687 5.432 25.147 40.559 1.00 49.22 C
ATOM 14 N1 U B2687 5.104 26.539 40.940 1.00 49.53 N
ATOM 15 C2 U B2687 3.889 26.893 41.474 1.00 49.77 C
ATOM 16 O2 U B2687 2.928 26.143 41.643 1.00 49.77 O
ATOM 17 N3 U B2687 3.800 28.236 41.763 1.00 50.05 N
ATOM 18 C4 U B2687 4.715 29.235 41.637 1.00 50.12 C
ATOM 19 O4 U B2687 4.425 30.374 41.997 1.00 50.41 O
ATOM 20 C5 U B2687 5.950 28.771 41.122 1.00 49.85 C
ATOM 21 C6 U B2687 6.089 27.486 40.810 1.00 49.57 C
ATOM 22 P A B2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 23 OP1 A B2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 24 OP2 A B2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 25 O5' A B2688 7.639 21.396 38.912 1.00 44.36 O
TER
ATOM 2 P U A2684 -2.010 34.101 40.095 1.00 55.25 P
ATOM 3 OP1 U A2684 -2.116 35.506 39.637 1.00 55.75 O
ATOM 4 OP2 U A2684 -3.092 33.134 39.753 1.00 55.31 O
ATOM 5 O5' U A2684 -0.627 33.489 39.676 1.00 54.83 O
ATOM 6 C5' U A2684 0.592 34.157 39.949 1.00 54.69 C
ATOM 7 C4' U A2684 1.750 33.313 39.521 1.00 54.28 C
ATOM 8 O4' U A2684 1.641 32.012 40.141 1.00 53.84 O
ATOM 9 C3' U A2684 1.823 33.029 38.035 1.00 54.46 C
ATOM 10 O3' U A2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 11 C2' U A2684 2.563 31.711 37.974 1.00 53.96 C
ATOM 12 O2' U A2684 3.953 31.930 37.983 1.00 53.72 O
ATOM 13 C1' U A2684 2.168 31.035 39.296 1.00 53.63 C
ATOM 14 N1 U A2684 1.162 30.005 39.082 1.00 53.63 N
ATOM 15 C2 U A2684 1.652 28.838 38.559 1.00 53.33 C
ATOM 16 O2 U A2684 2.807 28.608 38.357 1.00 53.06 O
ATOM 17 N3 U A2684 0.736 27.886 38.266 1.00 53.36 N
ATOM 18 C4 U A2684 -0.619 27.955 38.433 1.00 53.66 C
ATOM 19 O4 U A2684 -1.244 26.955 38.110 1.00 53.63 O
ATOM 20 C5 U A2684 -1.076 29.204 38.972 1.00 53.96 C
ATOM 21 C6 U A2684 -0.191 30.172 39.268 1.00 53.94 C
ATOM 22 P A A2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 23 OP1 A A2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 24 OP2 A A2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 25 O5' A A2685 2.746 33.306 34.983 1.00 52.23 O
TER
ATOM 1 O3' A B2686 3.764 24.442 36.232 1.00 43.88 O
ATOM 2 P U B2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 3 OP1 U B2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 4 OP2 U B2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 5 O5' U B2687 2.481 24.262 38.354 1.00 50.04 O
ATOM 6 C5' U B2687 3.080 23.158 38.996 1.00 49.56 C
ATOM 7 C4' U B2687 4.534 23.402 39.327 1.00 49.25 C
ATOM 8 O4' U B2687 4.798 24.820 39.344 1.00 49.49 O
ATOM 9 C3' U B2687 4.948 22.871 40.698 1.00 48.81 C
ATOM 10 O3' U B2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 11 C2' U B2687 4.989 24.099 41.561 1.00 48.91 C
ATOM 12 O2' U B2687 5.908 23.989 42.623 1.00 48.53 O
ATOM 13 C1' U B2687 5.432 25.147 40.559 1.00 49.22 C
ATOM 14 N1 U B2687 5.104 26.539 40.940 1.00 49.53 N
ATOM 15 C2 U B2687 3.889 26.893 41.474 1.00 49.77 C
ATOM 16 O2 U B2687 2.928 26.143 41.643 1.00 49.77 O
ATOM 17 N3 U B2687 3.800 28.236 41.763 1.00 50.05 N
ATOM 18 C4 U B2687 4.715 29.235 41.637 1.00 50.12 C
ATOM 19 O4 U B2687 4.425 30.374 41.997 1.00 50.41 O
ATOM 20 C5 U B2687 5.950 28.771 41.122 1.00 49.85 C
ATOM 21 C6 U B2687 6.089 27.486 40.810 1.00 49.57 C
ATOM 22 P A B2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 23 OP1 A B2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 24 OP2 A B2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 25 O5' A B2688 7.639 21.396 38.912 1.00 44.36 O
TER
Atoms:
C4: (-0.619,27.955,38.433)
N3: (0.736,27.886,38.266)
OP1: (-2.116,35.506,39.637)
OP2: (-3.092,33.134,39.753)
C2: (1.652,28.838,38.559)
C1': (2.168,31.035,39.296)
C3': (1.823,33.029,38.035)
O5': (-0.627,33.489,39.676)
O4': (1.641,32.012,40.141)
C5': (0.592,34.157,39.949)
P: (-2.010,34.101,40.095)
C4': (1.750,33.313,39.521)
C2': (2.563,31.711,37.974)
O2': (3.953,31.930,37.983)
N1: (1.162,30.005,39.082)
O4: (-1.244,26.955,38.110)
O2: (2.807,28.608,38.357)
C6: (-0.191,30.172,39.268)
C5: (-1.076,29.204,38.972)
O3': (2.479,34.077,37.335)
N3: (0.736,27.886,38.266)
OP1: (-2.116,35.506,39.637)
OP2: (-3.092,33.134,39.753)
C2: (1.652,28.838,38.559)
C1': (2.168,31.035,39.296)
C3': (1.823,33.029,38.035)
O5': (-0.627,33.489,39.676)
O4': (1.641,32.012,40.141)
C5': (0.592,34.157,39.949)
P: (-2.010,34.101,40.095)
C4': (1.750,33.313,39.521)
C2': (2.563,31.711,37.974)
O2': (3.953,31.930,37.983)
N1: (1.162,30.005,39.082)
O4: (-1.244,26.955,38.110)
O2: (2.807,28.608,38.357)
C6: (-0.191,30.172,39.268)
C5: (-1.076,29.204,38.972)
O3': (2.479,34.077,37.335)
C4: (4.715,29.235,41.637)
N3: (3.800,28.236,41.763)
OP1: (1.805,22.923,36.332)
OP2: (1.557,25.448,36.398)
C2: (3.889,26.893,41.474)
C1': (5.432,25.147,40.559)
C3': (4.948,22.871,40.698)
O5': (2.481,24.262,38.354)
O4': (4.798,24.820,39.344)
C5': (3.080,23.158,38.996)
P: (2.286,24.263,36.786)
C4': (4.534,23.402,39.327)
C2': (4.989,24.099,41.561)
O2': (5.908,23.989,42.623)
N1: (5.104,26.539,40.940)
O4: (4.425,30.374,41.997)
O2: (2.928,26.143,41.643)
C6: (6.089,27.486,40.810)
C5: (5.950,28.771,41.122)
O3': (6.246,22.336,40.654)
N3: (3.800,28.236,41.763)
OP1: (1.805,22.923,36.332)
OP2: (1.557,25.448,36.398)
C2: (3.889,26.893,41.474)
C1': (5.432,25.147,40.559)
C3': (4.948,22.871,40.698)
O5': (2.481,24.262,38.354)
O4': (4.798,24.820,39.344)
C5': (3.080,23.158,38.996)
P: (2.286,24.263,36.786)
C4': (4.534,23.402,39.327)
C2': (4.989,24.099,41.561)
O2': (5.908,23.989,42.623)
N1: (5.104,26.539,40.940)
O4: (4.425,30.374,41.997)
O2: (2.928,26.143,41.643)
C6: (6.089,27.486,40.810)
C5: (5.950,28.771,41.122)
O3': (6.246,22.336,40.654)
Image (generated by PyMOL):