Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12831:12808
Extra
PDB:
ATOM 1 O3' U A2830 22.802 49.677 83.127 1.00 85.00 O
ATOM 2 P U A2831 23.911 50.668 82.508 1.00108.14 P
ATOM 3 OP1 U A2831 23.852 50.500 81.038 1.00107.92 O
ATOM 4 OP2 U A2831 25.199 50.388 83.201 1.00108.00 O
ATOM 5 O5' U A2831 23.367 52.119 82.900 1.00108.80 O
ATOM 6 C5' U A2831 24.106 53.298 82.600 1.00109.17 C
ATOM 7 C4' U A2831 23.212 54.379 82.048 1.00109.63 C
ATOM 8 O4' U A2831 23.273 54.342 80.597 1.00109.45 O
ATOM 9 C3' U A2831 21.726 54.242 82.401 1.00109.77 C
ATOM 10 O3' U A2831 21.115 55.542 82.377 1.00110.36 O
ATOM 11 C2' U A2831 21.211 53.448 81.216 1.00109.37 C
ATOM 12 O2' U A2831 19.811 53.501 81.032 1.00109.53 O
ATOM 13 C1' U A2831 21.972 54.147 80.092 1.00109.46 C
ATOM 14 N1 U A2831 22.057 53.393 78.831 1.00109.02 N
ATOM 15 C2 U A2831 21.442 54.050 77.798 1.00109.26 C
ATOM 16 O2 U A2831 20.898 55.125 77.968 1.00109.78 O
ATOM 17 N3 U A2831 21.470 53.417 76.585 1.00108.91 N
ATOM 18 C4 U A2831 22.038 52.196 76.307 1.00108.34 C
ATOM 19 O4 U A2831 21.965 51.761 75.147 1.00108.10 O
ATOM 20 C5 U A2831 22.657 51.572 77.446 1.00108.12 C
ATOM 21 C6 U A2831 22.658 52.174 78.646 1.00108.46 C
ATOM 22 P G A2832 20.487 56.186 83.715 1.00 79.57 P
ATOM 23 OP1 G A2832 20.214 57.635 83.438 1.00 80.18 O
ATOM 24 OP2 G A2832 21.415 55.826 84.831 1.00 79.46 O
ATOM 25 O5' G A2832 19.094 55.404 83.870 1.00 79.42 O
TER
ATOM 1 O3' U B2807 20.180 56.024 72.728 1.00 50.73 O
ATOM 2 P U B2808 20.092 55.526 74.232 1.00 53.85 P
ATOM 3 OP1 U B2808 20.360 54.054 74.212 1.00 53.21 O
ATOM 4 OP2 U B2808 18.822 56.023 74.767 1.00 54.24 O
ATOM 5 O5' U B2808 21.293 56.273 74.918 1.00 54.06 O
ATOM 6 C5' U B2808 21.285 57.671 75.066 1.00 54.67 C
ATOM 7 C4' U B2808 22.601 58.272 74.673 1.00 54.75 C
ATOM 8 O4' U B2808 23.593 57.942 75.663 1.00 54.57 O
ATOM 9 C3' U B2808 23.150 57.819 73.326 1.00 54.41 C
ATOM 10 O3' U B2808 23.247 58.931 72.457 1.00 54.83 O
ATOM 11 C2' U B2808 24.551 57.272 73.631 1.00 54.05 C
ATOM 12 O2' U B2808 25.547 57.745 72.760 1.00 54.11 O
ATOM 13 C1' U B2808 24.832 57.742 75.041 1.00 54.32 C
ATOM 14 N1 U B2808 25.625 56.779 75.843 1.00 53.89 N
ATOM 15 C2 U B2808 26.916 57.187 76.148 1.00 53.97 C
ATOM 16 O2 U B2808 27.338 58.268 75.782 1.00 54.37 O
ATOM 17 N3 U B2808 27.704 56.346 76.889 1.00 53.61 N
ATOM 18 C4 U B2808 27.299 55.128 77.354 1.00 53.18 C
ATOM 19 O4 U B2808 28.100 54.455 78.017 1.00 52.90 O
ATOM 20 C5 U B2808 25.947 54.781 77.003 1.00 53.13 C
ATOM 21 C6 U B2808 25.166 55.578 76.273 1.00 53.47 C
ATOM 22 P U B2809 22.039 59.259 71.446 1.00 59.25 P
ATOM 23 OP1 U B2809 20.813 59.482 72.259 1.00 59.53 O
ATOM 24 OP2 U B2809 22.036 58.195 70.418 1.00 58.75 O
ATOM 25 O5' U B2809 22.499 60.622 70.797 1.00 59.77 O
TER
ATOM 2 P U A2831 23.911 50.668 82.508 1.00108.14 P
ATOM 3 OP1 U A2831 23.852 50.500 81.038 1.00107.92 O
ATOM 4 OP2 U A2831 25.199 50.388 83.201 1.00108.00 O
ATOM 5 O5' U A2831 23.367 52.119 82.900 1.00108.80 O
ATOM 6 C5' U A2831 24.106 53.298 82.600 1.00109.17 C
ATOM 7 C4' U A2831 23.212 54.379 82.048 1.00109.63 C
ATOM 8 O4' U A2831 23.273 54.342 80.597 1.00109.45 O
ATOM 9 C3' U A2831 21.726 54.242 82.401 1.00109.77 C
ATOM 10 O3' U A2831 21.115 55.542 82.377 1.00110.36 O
ATOM 11 C2' U A2831 21.211 53.448 81.216 1.00109.37 C
ATOM 12 O2' U A2831 19.811 53.501 81.032 1.00109.53 O
ATOM 13 C1' U A2831 21.972 54.147 80.092 1.00109.46 C
ATOM 14 N1 U A2831 22.057 53.393 78.831 1.00109.02 N
ATOM 15 C2 U A2831 21.442 54.050 77.798 1.00109.26 C
ATOM 16 O2 U A2831 20.898 55.125 77.968 1.00109.78 O
ATOM 17 N3 U A2831 21.470 53.417 76.585 1.00108.91 N
ATOM 18 C4 U A2831 22.038 52.196 76.307 1.00108.34 C
ATOM 19 O4 U A2831 21.965 51.761 75.147 1.00108.10 O
ATOM 20 C5 U A2831 22.657 51.572 77.446 1.00108.12 C
ATOM 21 C6 U A2831 22.658 52.174 78.646 1.00108.46 C
ATOM 22 P G A2832 20.487 56.186 83.715 1.00 79.57 P
ATOM 23 OP1 G A2832 20.214 57.635 83.438 1.00 80.18 O
ATOM 24 OP2 G A2832 21.415 55.826 84.831 1.00 79.46 O
ATOM 25 O5' G A2832 19.094 55.404 83.870 1.00 79.42 O
TER
ATOM 1 O3' U B2807 20.180 56.024 72.728 1.00 50.73 O
ATOM 2 P U B2808 20.092 55.526 74.232 1.00 53.85 P
ATOM 3 OP1 U B2808 20.360 54.054 74.212 1.00 53.21 O
ATOM 4 OP2 U B2808 18.822 56.023 74.767 1.00 54.24 O
ATOM 5 O5' U B2808 21.293 56.273 74.918 1.00 54.06 O
ATOM 6 C5' U B2808 21.285 57.671 75.066 1.00 54.67 C
ATOM 7 C4' U B2808 22.601 58.272 74.673 1.00 54.75 C
ATOM 8 O4' U B2808 23.593 57.942 75.663 1.00 54.57 O
ATOM 9 C3' U B2808 23.150 57.819 73.326 1.00 54.41 C
ATOM 10 O3' U B2808 23.247 58.931 72.457 1.00 54.83 O
ATOM 11 C2' U B2808 24.551 57.272 73.631 1.00 54.05 C
ATOM 12 O2' U B2808 25.547 57.745 72.760 1.00 54.11 O
ATOM 13 C1' U B2808 24.832 57.742 75.041 1.00 54.32 C
ATOM 14 N1 U B2808 25.625 56.779 75.843 1.00 53.89 N
ATOM 15 C2 U B2808 26.916 57.187 76.148 1.00 53.97 C
ATOM 16 O2 U B2808 27.338 58.268 75.782 1.00 54.37 O
ATOM 17 N3 U B2808 27.704 56.346 76.889 1.00 53.61 N
ATOM 18 C4 U B2808 27.299 55.128 77.354 1.00 53.18 C
ATOM 19 O4 U B2808 28.100 54.455 78.017 1.00 52.90 O
ATOM 20 C5 U B2808 25.947 54.781 77.003 1.00 53.13 C
ATOM 21 C6 U B2808 25.166 55.578 76.273 1.00 53.47 C
ATOM 22 P U B2809 22.039 59.259 71.446 1.00 59.25 P
ATOM 23 OP1 U B2809 20.813 59.482 72.259 1.00 59.53 O
ATOM 24 OP2 U B2809 22.036 58.195 70.418 1.00 58.75 O
ATOM 25 O5' U B2809 22.499 60.622 70.797 1.00 59.77 O
TER
Atoms:
C4: (22.038,52.196,76.307)
N3: (21.470,53.417,76.585)
OP1: (23.852,50.500,81.038)
OP2: (25.199,50.388,83.201)
C2: (21.442,54.050,77.798)
C1': (21.972,54.147,80.092)
C3': (21.726,54.242,82.401)
O5': (23.367,52.119,82.900)
O4': (23.273,54.342,80.597)
C5': (24.106,53.298,82.600)
P: (23.911,50.668,82.508)
C4': (23.212,54.379,82.048)
C2': (21.211,53.448,81.216)
O2': (19.811,53.501,81.032)
N1: (22.057,53.393,78.831)
O4: (21.965,51.761,75.147)
O2: (20.898,55.125,77.968)
C6: (22.658,52.174,78.646)
C5: (22.657,51.572,77.446)
O3': (21.115,55.542,82.377)
N3: (21.470,53.417,76.585)
OP1: (23.852,50.500,81.038)
OP2: (25.199,50.388,83.201)
C2: (21.442,54.050,77.798)
C1': (21.972,54.147,80.092)
C3': (21.726,54.242,82.401)
O5': (23.367,52.119,82.900)
O4': (23.273,54.342,80.597)
C5': (24.106,53.298,82.600)
P: (23.911,50.668,82.508)
C4': (23.212,54.379,82.048)
C2': (21.211,53.448,81.216)
O2': (19.811,53.501,81.032)
N1: (22.057,53.393,78.831)
O4: (21.965,51.761,75.147)
O2: (20.898,55.125,77.968)
C6: (22.658,52.174,78.646)
C5: (22.657,51.572,77.446)
O3': (21.115,55.542,82.377)
C4: (27.299,55.128,77.354)
N3: (27.704,56.346,76.889)
OP1: (20.360,54.054,74.212)
OP2: (18.822,56.023,74.767)
C2: (26.916,57.187,76.148)
C1': (24.832,57.742,75.041)
C3': (23.150,57.819,73.326)
O5': (21.293,56.273,74.918)
O4': (23.593,57.942,75.663)
C5': (21.285,57.671,75.066)
P: (20.092,55.526,74.232)
C4': (22.601,58.272,74.673)
C2': (24.551,57.272,73.631)
O2': (25.547,57.745,72.760)
N1: (25.625,56.779,75.843)
O4: (28.100,54.455,78.017)
O2: (27.338,58.268,75.782)
C6: (25.166,55.578,76.273)
C5: (25.947,54.781,77.003)
O3': (23.247,58.931,72.457)
N3: (27.704,56.346,76.889)
OP1: (20.360,54.054,74.212)
OP2: (18.822,56.023,74.767)
C2: (26.916,57.187,76.148)
C1': (24.832,57.742,75.041)
C3': (23.150,57.819,73.326)
O5': (21.293,56.273,74.918)
O4': (23.593,57.942,75.663)
C5': (21.285,57.671,75.066)
P: (20.092,55.526,74.232)
C4': (22.601,58.272,74.673)
C2': (24.551,57.272,73.631)
O2': (25.547,57.745,72.760)
N1: (25.625,56.779,75.843)
O4: (28.100,54.455,78.017)
O2: (27.338,58.268,75.782)
C6: (25.166,55.578,76.273)
C5: (25.947,54.781,77.003)
O3': (23.247,58.931,72.457)
Image (generated by PyMOL):