ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1818:12730

Extra

PDB:
ATOM 1 O3' C A 817 17.328 28.006 74.565 1.00 38.70 O
ATOM 2 P U A 818 16.579 27.579 73.216 1.00 42.66 P
ATOM 3 OP1 U A 818 17.566 27.828 72.133 1.00 42.56 O
ATOM 4 OP2 U A 818 15.271 28.275 73.147 1.00 43.00 O
ATOM 5 O5' U A 818 16.394 26.037 73.413 1.00 42.33 O
ATOM 6 C5' U A 818 17.527 25.207 73.503 1.00 42.01 C
ATOM 7 C4' U A 818 17.580 24.493 74.819 1.00 41.91 C
ATOM 8 O4' U A 818 17.023 23.177 74.659 1.00 41.68 O
ATOM 9 C3' U A 818 18.944 24.190 75.355 1.00 41.71 C
ATOM 10 O3' U A 818 19.624 25.329 75.881 1.00 41.92 O
ATOM 11 C2' U A 818 18.642 23.059 76.348 1.00 41.56 C
ATOM 12 O2' U A 818 18.003 23.554 77.519 1.00 41.82 O
ATOM 13 C1' U A 818 17.595 22.300 75.575 1.00 41.48 C
ATOM 14 N1 U A 818 18.093 21.173 74.847 1.00 41.15 N
ATOM 15 C2 U A 818 18.225 20.065 75.595 1.00 40.96 C
ATOM 16 O2 U A 818 18.084 20.047 76.790 1.00 41.04 O
ATOM 17 N3 U A 818 18.579 18.995 74.896 1.00 40.68 N
ATOM 18 C4 U A 818 18.754 18.943 73.551 1.00 40.58 C
ATOM 19 O4 U A 818 19.081 17.839 73.141 1.00 40.33 O
ATOM 20 C5 U A 818 18.542 20.124 72.780 1.00 40.80 C
ATOM 21 C6 U A 818 18.187 21.193 73.476 1.00 41.08 C
ATOM 22 P G A 819 20.841 25.939 75.039 1.00 39.02 P
ATOM 23 OP1 G A 819 20.373 26.073 73.684 1.00 39.03 O
ATOM 24 OP2 G A 819 21.978 25.092 75.298 1.00 38.72 O
ATOM 25 O5' G A 819 21.069 27.387 75.609 1.00 39.36 O
TER

ATOM 1 O3' G B2729 17.862 15.130 78.181 1.00 41.85 O
ATOM 2 P U B2730 18.752 15.524 76.928 1.00 56.42 P
ATOM 3 OP1 U B2730 18.022 16.562 76.178 1.00 56.63 O
ATOM 4 OP2 U B2730 19.075 14.298 76.247 1.00 56.14 O
ATOM 5 O5' U B2730 20.079 16.108 77.605 1.00 56.42 O
ATOM 6 C5' U B2730 20.106 17.389 78.204 1.00 56.68 C
ATOM 7 C4' U B2730 21.523 17.946 78.305 1.00 56.64 C
ATOM 8 O4' U B2730 22.226 17.393 79.481 1.00 56.57 O
ATOM 9 C3' U B2730 22.481 17.696 77.109 1.00 56.42 C
ATOM 10 O3' U B2730 23.387 18.816 77.031 1.00 56.54 O
ATOM 11 C2' U B2730 23.281 16.493 77.636 1.00 56.18 C
ATOM 12 O2' U B2730 24.482 16.217 76.956 1.00 55.98 O
ATOM 13 C1' U B2730 23.524 16.997 79.047 1.00 56.35 C
ATOM 14 N1 U B2730 24.137 16.025 80.004 1.00 56.21 N
ATOM 15 C2 U B2730 24.606 16.605 81.200 1.00 56.38 C
ATOM 16 O2 U B2730 24.434 17.790 81.479 1.00 56.63 O
ATOM 17 N3 U B2730 25.219 15.767 82.099 1.00 56.28 N
ATOM 18 C4 U B2730 25.431 14.415 81.904 1.00 56.03 C
ATOM 19 O4 U B2730 25.994 13.782 82.797 1.00 55.98 O
ATOM 20 C5 U B2730 24.955 13.871 80.644 1.00 55.86 C
ATOM 21 C6 U B2730 24.349 14.673 79.735 1.00 55.95 C
ATOM 22 P U B2731 23.459 19.771 75.748 1.00 66.27 P
ATOM 23 OP1 U B2731 24.509 20.783 76.018 1.00 66.38 O
ATOM 24 OP2 U B2731 22.077 20.234 75.467 1.00 66.47 O
ATOM 25 O5' U B2731 23.954 18.793 74.598 1.00 65.97 O
TER

Atoms:
C4: (18.754,18.943,73.551)
N3: (18.579,18.995,74.896)
OP1: (17.566,27.828,72.133)
OP2: (15.271,28.275,73.147)
C2: (18.225,20.065,75.595)
C1': (17.595,22.300,75.575)
C3': (18.944,24.190,75.355)
O5': (16.394,26.037,73.413)
O4': (17.023,23.177,74.659)
C5': (17.527,25.207,73.503)
P: (16.579,27.579,73.216)
C4': (17.580,24.493,74.819)
C2': (18.642,23.059,76.348)
O2': (18.003,23.554,77.519)
N1: (18.093,21.173,74.847)
O4: (19.081,17.839,73.141)
O2: (18.084,20.047,76.790)
C6: (18.187,21.193,73.476)
C5: (18.542,20.124,72.780)
O3': (19.624,25.329,75.881)
C4: (25.431,14.415,81.904)
N3: (25.219,15.767,82.099)
OP1: (18.022,16.562,76.178)
OP2: (19.075,14.298,76.247)
C2: (24.606,16.605,81.200)
C1': (23.524,16.997,79.047)
C3': (22.481,17.696,77.109)
O5': (20.079,16.108,77.605)
O4': (22.226,17.393,79.481)
C5': (20.106,17.389,78.204)
P: (18.752,15.524,76.928)
C4': (21.523,17.946,78.305)
C2': (23.281,16.493,77.636)
O2': (24.482,16.217,76.956)
N1: (24.137,16.025,80.004)
O4: (25.994,13.782,82.797)
O2: (24.434,17.790,81.479)
C6: (24.349,14.673,79.735)
C5: (24.955,13.871,80.644)
O3': (23.387,18.816,77.031)
Image (generated by PyMOL):
PyMOL image
show in jmol