Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21128:21612
Extra
PDB:
ATOM 1 O3' U A1127 -79.686 -15.643 77.248 1.00 72.12 O
ATOM 2 P G A1128 -79.052 -17.097 77.511 1.00 80.87 P
ATOM 3 OP1 G A1128 -79.985 -18.093 76.913 1.00 81.32 O
ATOM 4 OP2 G A1128 -78.737 -17.185 78.961 1.00 80.91 O
ATOM 5 O5' G A1128 -77.710 -17.042 76.680 1.00 80.18 O
ATOM 6 C5' G A1128 -77.236 -18.153 75.951 1.00 79.99 C
ATOM 7 C4' G A1128 -76.382 -17.701 74.793 1.00 79.48 C
ATOM 8 O4' G A1128 -75.967 -16.317 74.983 1.00 79.21 O
ATOM 9 C3' G A1128 -75.092 -18.464 74.576 1.00 78.98 C
ATOM 10 O3' G A1128 -75.297 -19.663 73.840 1.00 79.11 O
ATOM 11 C2' G A1128 -74.235 -17.450 73.834 1.00 78.48 C
ATOM 12 O2' G A1128 -74.612 -17.421 72.462 1.00 78.53 O
ATOM 13 C1' G A1128 -74.675 -16.129 74.478 1.00 78.61 C
ATOM 14 N9 G A1128 -73.798 -15.685 75.598 1.00 78.32 N
ATOM 15 C8 G A1128 -74.294 -15.364 76.853 1.00 78.61 C
ATOM 16 N7 G A1128 -73.395 -14.949 77.707 1.00 78.30 N
ATOM 17 C5 G A1128 -72.217 -14.955 76.990 1.00 77.76 C
ATOM 18 C6 G A1128 -70.924 -14.594 77.427 1.00 77.29 C
ATOM 19 O6 G A1128 -70.542 -14.173 78.538 1.00 77.23 O
ATOM 20 N1 G A1128 -70.021 -14.751 76.398 1.00 76.86 N
ATOM 21 C2 G A1128 -70.339 -15.181 75.144 1.00 76.91 C
ATOM 22 N2 G A1128 -69.316 -15.253 74.298 1.00 76.47 N
ATOM 23 N3 G A1128 -71.538 -15.508 74.725 1.00 77.34 N
ATOM 24 C4 G A1128 -72.440 -15.379 75.692 1.00 77.76 C
ATOM 25 P A A1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 26 OP1 A A1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 27 OP2 A A1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 28 O5' A A1129 -73.245 -21.047 74.160 1.00 69.84 O
TER
ATOM 1 O3' G B1611 -65.418 -12.362 86.848 1.00 74.32 O
ATOM 2 P U B1612 -66.059 -11.198 85.939 1.00 79.59 P
ATOM 3 OP1 U B1612 -65.508 -9.906 86.423 1.00 79.36 O
ATOM 4 OP2 U B1612 -67.530 -11.387 85.951 1.00 80.11 O
ATOM 5 O5' U B1612 -65.486 -11.526 84.490 1.00 79.21 O
ATOM 6 C5' U B1612 -64.092 -11.471 84.233 1.00 78.72 C
ATOM 7 C4' U B1612 -63.763 -11.972 82.861 1.00 78.47 C
ATOM 8 O4' U B1612 -64.134 -13.364 82.754 1.00 78.72 O
ATOM 9 C3' U B1612 -64.496 -11.295 81.721 1.00 78.48 C
ATOM 10 O3' U B1612 -63.896 -10.081 81.331 1.00 78.13 O
ATOM 11 C2' U B1612 -64.473 -12.356 80.629 1.00 78.43 C
ATOM 12 O2' U B1612 -63.223 -12.368 79.947 1.00 77.97 O
ATOM 13 C1' U B1612 -64.602 -13.640 81.450 1.00 78.71 C
ATOM 14 N1 U B1612 -66.003 -14.066 81.541 1.00 79.21 N
ATOM 15 C2 U B1612 -66.583 -14.612 80.398 1.00 79.31 C
ATOM 16 O2 U B1612 -65.940 -14.786 79.343 1.00 78.98 O
ATOM 17 N3 U B1612 -67.930 -14.954 80.571 1.00 79.82 N
ATOM 18 C4 U B1612 -68.711 -14.791 81.714 1.00 80.23 C
ATOM 19 O4 U B1612 -69.899 -15.122 81.724 1.00 80.69 O
ATOM 20 C5 U B1612 -68.028 -14.207 82.830 1.00 80.09 C
ATOM 21 C6 U B1612 -66.734 -13.868 82.702 1.00 79.60 C
ATOM 22 P A B1613 -64.779 -8.754 81.176 1.00 72.11 P
ATOM 23 OP1 A B1613 -64.739 -8.055 82.480 1.00 72.19 O
ATOM 24 OP2 A B1613 -66.085 -9.156 80.608 1.00 72.50 O
ATOM 25 O5' A B1613 -63.974 -7.900 80.118 1.00 71.68 O
TER
ATOM 2 P G A1128 -79.052 -17.097 77.511 1.00 80.87 P
ATOM 3 OP1 G A1128 -79.985 -18.093 76.913 1.00 81.32 O
ATOM 4 OP2 G A1128 -78.737 -17.185 78.961 1.00 80.91 O
ATOM 5 O5' G A1128 -77.710 -17.042 76.680 1.00 80.18 O
ATOM 6 C5' G A1128 -77.236 -18.153 75.951 1.00 79.99 C
ATOM 7 C4' G A1128 -76.382 -17.701 74.793 1.00 79.48 C
ATOM 8 O4' G A1128 -75.967 -16.317 74.983 1.00 79.21 O
ATOM 9 C3' G A1128 -75.092 -18.464 74.576 1.00 78.98 C
ATOM 10 O3' G A1128 -75.297 -19.663 73.840 1.00 79.11 O
ATOM 11 C2' G A1128 -74.235 -17.450 73.834 1.00 78.48 C
ATOM 12 O2' G A1128 -74.612 -17.421 72.462 1.00 78.53 O
ATOM 13 C1' G A1128 -74.675 -16.129 74.478 1.00 78.61 C
ATOM 14 N9 G A1128 -73.798 -15.685 75.598 1.00 78.32 N
ATOM 15 C8 G A1128 -74.294 -15.364 76.853 1.00 78.61 C
ATOM 16 N7 G A1128 -73.395 -14.949 77.707 1.00 78.30 N
ATOM 17 C5 G A1128 -72.217 -14.955 76.990 1.00 77.76 C
ATOM 18 C6 G A1128 -70.924 -14.594 77.427 1.00 77.29 C
ATOM 19 O6 G A1128 -70.542 -14.173 78.538 1.00 77.23 O
ATOM 20 N1 G A1128 -70.021 -14.751 76.398 1.00 76.86 N
ATOM 21 C2 G A1128 -70.339 -15.181 75.144 1.00 76.91 C
ATOM 22 N2 G A1128 -69.316 -15.253 74.298 1.00 76.47 N
ATOM 23 N3 G A1128 -71.538 -15.508 74.725 1.00 77.34 N
ATOM 24 C4 G A1128 -72.440 -15.379 75.692 1.00 77.76 C
ATOM 25 P A A1129 -74.815 -21.079 74.434 1.00 70.49 P
ATOM 26 OP1 A A1129 -75.446 -22.153 73.600 1.00 70.78 O
ATOM 27 OP2 A A1129 -75.088 -21.053 75.906 1.00 70.76 O
ATOM 28 O5' A A1129 -73.245 -21.047 74.160 1.00 69.84 O
TER
ATOM 1 O3' G B1611 -65.418 -12.362 86.848 1.00 74.32 O
ATOM 2 P U B1612 -66.059 -11.198 85.939 1.00 79.59 P
ATOM 3 OP1 U B1612 -65.508 -9.906 86.423 1.00 79.36 O
ATOM 4 OP2 U B1612 -67.530 -11.387 85.951 1.00 80.11 O
ATOM 5 O5' U B1612 -65.486 -11.526 84.490 1.00 79.21 O
ATOM 6 C5' U B1612 -64.092 -11.471 84.233 1.00 78.72 C
ATOM 7 C4' U B1612 -63.763 -11.972 82.861 1.00 78.47 C
ATOM 8 O4' U B1612 -64.134 -13.364 82.754 1.00 78.72 O
ATOM 9 C3' U B1612 -64.496 -11.295 81.721 1.00 78.48 C
ATOM 10 O3' U B1612 -63.896 -10.081 81.331 1.00 78.13 O
ATOM 11 C2' U B1612 -64.473 -12.356 80.629 1.00 78.43 C
ATOM 12 O2' U B1612 -63.223 -12.368 79.947 1.00 77.97 O
ATOM 13 C1' U B1612 -64.602 -13.640 81.450 1.00 78.71 C
ATOM 14 N1 U B1612 -66.003 -14.066 81.541 1.00 79.21 N
ATOM 15 C2 U B1612 -66.583 -14.612 80.398 1.00 79.31 C
ATOM 16 O2 U B1612 -65.940 -14.786 79.343 1.00 78.98 O
ATOM 17 N3 U B1612 -67.930 -14.954 80.571 1.00 79.82 N
ATOM 18 C4 U B1612 -68.711 -14.791 81.714 1.00 80.23 C
ATOM 19 O4 U B1612 -69.899 -15.122 81.724 1.00 80.69 O
ATOM 20 C5 U B1612 -68.028 -14.207 82.830 1.00 80.09 C
ATOM 21 C6 U B1612 -66.734 -13.868 82.702 1.00 79.60 C
ATOM 22 P A B1613 -64.779 -8.754 81.176 1.00 72.11 P
ATOM 23 OP1 A B1613 -64.739 -8.055 82.480 1.00 72.19 O
ATOM 24 OP2 A B1613 -66.085 -9.156 80.608 1.00 72.50 O
ATOM 25 O5' A B1613 -63.974 -7.900 80.118 1.00 71.68 O
TER
Atoms:
OP1: (-79.985,-18.093,76.913)
OP2: (-78.737,-17.185,78.961)
C3': (-75.092,-18.464,74.576)
C1': (-74.675,-16.129,74.478)
C5': (-77.236,-18.153,75.951)
O6: (-70.542,-14.173,78.538)
O4': (-75.967,-16.317,74.983)
C8: (-74.294,-15.364,76.853)
C2: (-70.339,-15.181,75.144)
C6: (-70.924,-14.594,77.427)
C5: (-72.217,-14.955,76.990)
C4: (-72.440,-15.379,75.692)
P: (-79.052,-17.097,77.511)
C4': (-76.382,-17.701,74.793)
C2': (-74.235,-17.450,73.834)
O2': (-74.612,-17.421,72.462)
N1: (-70.021,-14.751,76.398)
N2: (-69.316,-15.253,74.298)
N3: (-71.538,-15.508,74.725)
N7: (-73.395,-14.949,77.707)
N9: (-73.798,-15.685,75.598)
O5': (-77.710,-17.042,76.680)
O3': (-75.297,-19.663,73.840)
OP2: (-78.737,-17.185,78.961)
C3': (-75.092,-18.464,74.576)
C1': (-74.675,-16.129,74.478)
C5': (-77.236,-18.153,75.951)
O6: (-70.542,-14.173,78.538)
O4': (-75.967,-16.317,74.983)
C8: (-74.294,-15.364,76.853)
C2: (-70.339,-15.181,75.144)
C6: (-70.924,-14.594,77.427)
C5: (-72.217,-14.955,76.990)
C4: (-72.440,-15.379,75.692)
P: (-79.052,-17.097,77.511)
C4': (-76.382,-17.701,74.793)
C2': (-74.235,-17.450,73.834)
O2': (-74.612,-17.421,72.462)
N1: (-70.021,-14.751,76.398)
N2: (-69.316,-15.253,74.298)
N3: (-71.538,-15.508,74.725)
N7: (-73.395,-14.949,77.707)
N9: (-73.798,-15.685,75.598)
O5': (-77.710,-17.042,76.680)
O3': (-75.297,-19.663,73.840)
C4: (-68.711,-14.791,81.714)
N3: (-67.930,-14.954,80.571)
OP1: (-65.508,-9.906,86.423)
OP2: (-67.530,-11.387,85.951)
C2: (-66.583,-14.612,80.398)
C1': (-64.602,-13.640,81.450)
C3': (-64.496,-11.295,81.721)
O5': (-65.486,-11.526,84.490)
O4': (-64.134,-13.364,82.754)
C5': (-64.092,-11.471,84.233)
P: (-66.059,-11.198,85.939)
C4': (-63.763,-11.972,82.861)
C2': (-64.473,-12.356,80.629)
O2': (-63.223,-12.368,79.947)
N1: (-66.003,-14.066,81.541)
O4: (-69.899,-15.122,81.724)
O2: (-65.940,-14.786,79.343)
C6: (-66.734,-13.868,82.702)
C5: (-68.028,-14.207,82.830)
O3': (-63.896,-10.081,81.331)
N3: (-67.930,-14.954,80.571)
OP1: (-65.508,-9.906,86.423)
OP2: (-67.530,-11.387,85.951)
C2: (-66.583,-14.612,80.398)
C1': (-64.602,-13.640,81.450)
C3': (-64.496,-11.295,81.721)
O5': (-65.486,-11.526,84.490)
O4': (-64.134,-13.364,82.754)
C5': (-64.092,-11.471,84.233)
P: (-66.059,-11.198,85.939)
C4': (-63.763,-11.972,82.861)
C2': (-64.473,-12.356,80.629)
O2': (-63.223,-12.368,79.947)
N1: (-66.003,-14.066,81.541)
O4: (-69.899,-15.122,81.724)
O2: (-65.940,-14.786,79.343)
C6: (-66.734,-13.868,82.702)
C5: (-68.028,-14.207,82.830)
O3': (-63.896,-10.081,81.331)
Image (generated by PyMOL):