Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11018:11027
Extra
PDB:
ATOM 1 O3' U A1017 62.674 -85.746 52.924 1.00 74.73 O
ATOM 2 P U A1018 61.348 -86.524 53.369 1.00 68.61 P
ATOM 3 OP1 U A1018 61.620 -87.067 54.723 1.00 68.80 O
ATOM 4 OP2 U A1018 60.982 -87.464 52.273 1.00 69.15 O
ATOM 5 O5' U A1018 60.257 -85.368 53.467 1.00 67.92 O
ATOM 6 C5' U A1018 59.927 -84.778 54.706 1.00 67.50 C
ATOM 7 C4' U A1018 58.579 -84.135 54.641 1.00 67.06 C
ATOM 8 O4' U A1018 58.580 -83.098 53.629 1.00 66.65 O
ATOM 9 C3' U A1018 57.455 -85.049 54.231 1.00 67.44 C
ATOM 10 O3' U A1018 56.956 -85.785 55.321 1.00 67.67 O
ATOM 11 C2' U A1018 56.439 -84.089 53.634 1.00 66.94 C
ATOM 12 O2' U A1018 55.735 -83.435 54.660 1.00 66.48 O
ATOM 13 C1' U A1018 57.337 -83.062 52.969 1.00 66.58 C
ATOM 14 N1 U A1018 57.562 -83.343 51.536 1.00 66.88 N
ATOM 15 C2 U A1018 56.888 -82.581 50.593 1.00 66.56 C
ATOM 16 O2 U A1018 56.081 -81.711 50.894 1.00 66.05 O
ATOM 17 N3 U A1018 57.206 -82.880 49.289 1.00 66.87 N
ATOM 18 C4 U A1018 58.099 -83.846 48.869 1.00 67.46 C
ATOM 19 O4 U A1018 58.317 -84.039 47.680 1.00 67.72 O
ATOM 20 C5 U A1018 58.742 -84.569 49.903 1.00 67.75 C
ATOM 21 C6 U A1018 58.474 -84.292 51.165 1.00 67.45 C
ATOM 22 P A A1019 55.930 -86.998 55.080 1.00 69.70 P
ATOM 23 OP1 A A1019 55.878 -87.783 56.351 1.00 69.99 O
ATOM 24 OP2 A A1019 56.353 -87.673 53.821 1.00 70.18 O
ATOM 25 O5' A A1019 54.541 -86.256 54.848 1.00 69.24 O
TER
ATOM 1 O3' U B1026 53.077 -86.073 37.977 1.00 94.04 O
ATOM 2 P G B1027 54.018 -84.778 37.821 1.00 69.03 P
ATOM 3 OP1 G B1027 53.784 -84.250 36.407 1.00 69.04 O
ATOM 4 OP2 G B1027 55.395 -85.194 38.239 1.00 69.24 O
ATOM 5 O5' G B1027 53.409 -83.739 38.902 1.00 68.28 O
ATOM 6 C5' G B1027 52.860 -82.472 38.509 1.00 67.72 C
ATOM 7 C4' G B1027 51.935 -81.920 39.567 1.00 67.21 C
ATOM 8 O4' G B1027 51.761 -82.890 40.619 1.00 67.48 O
ATOM 9 C3' G B1027 52.407 -80.687 40.299 1.00 66.53 C
ATOM 10 O3' G B1027 52.187 -79.512 39.564 1.00 66.11 O
ATOM 11 C2' G B1027 51.613 -80.735 41.597 1.00 66.29 C
ATOM 12 O2' G B1027 50.305 -80.225 41.402 1.00 66.03 O
ATOM 13 C1' G B1027 51.488 -82.229 41.834 1.00 66.94 C
ATOM 14 N9 G B1027 52.383 -82.746 42.900 1.00 67.06 N
ATOM 15 C8 G B1027 53.361 -83.674 42.689 1.00 67.59 C
ATOM 16 N7 G B1027 53.980 -84.039 43.779 1.00 67.63 N
ATOM 17 C5 G B1027 53.368 -83.332 44.809 1.00 67.10 C
ATOM 18 C6 G B1027 53.637 -83.339 46.223 1.00 66.92 C
ATOM 19 O6 G B1027 54.490 -83.978 46.865 1.00 67.19 O
ATOM 20 N1 G B1027 52.781 -82.479 46.899 1.00 66.36 N
ATOM 21 C2 G B1027 51.823 -81.713 46.312 1.00 66.03 C
ATOM 22 N2 G B1027 51.117 -80.963 47.149 1.00 65.53 N
ATOM 23 N3 G B1027 51.565 -81.699 45.017 1.00 66.19 N
ATOM 24 C4 G B1027 52.364 -82.530 44.291 1.00 66.74 C
ATOM 25 P A B1028 53.302 -78.354 39.540 1.00 61.65 P
ATOM 26 OP1 A B1028 52.926 -77.387 38.453 1.00 61.40 O
ATOM 27 OP2 A B1028 54.630 -79.022 39.489 1.00 62.04 O
ATOM 28 O5' A B1028 53.129 -77.665 40.949 1.00 61.09 O
TER
ATOM 2 P U A1018 61.348 -86.524 53.369 1.00 68.61 P
ATOM 3 OP1 U A1018 61.620 -87.067 54.723 1.00 68.80 O
ATOM 4 OP2 U A1018 60.982 -87.464 52.273 1.00 69.15 O
ATOM 5 O5' U A1018 60.257 -85.368 53.467 1.00 67.92 O
ATOM 6 C5' U A1018 59.927 -84.778 54.706 1.00 67.50 C
ATOM 7 C4' U A1018 58.579 -84.135 54.641 1.00 67.06 C
ATOM 8 O4' U A1018 58.580 -83.098 53.629 1.00 66.65 O
ATOM 9 C3' U A1018 57.455 -85.049 54.231 1.00 67.44 C
ATOM 10 O3' U A1018 56.956 -85.785 55.321 1.00 67.67 O
ATOM 11 C2' U A1018 56.439 -84.089 53.634 1.00 66.94 C
ATOM 12 O2' U A1018 55.735 -83.435 54.660 1.00 66.48 O
ATOM 13 C1' U A1018 57.337 -83.062 52.969 1.00 66.58 C
ATOM 14 N1 U A1018 57.562 -83.343 51.536 1.00 66.88 N
ATOM 15 C2 U A1018 56.888 -82.581 50.593 1.00 66.56 C
ATOM 16 O2 U A1018 56.081 -81.711 50.894 1.00 66.05 O
ATOM 17 N3 U A1018 57.206 -82.880 49.289 1.00 66.87 N
ATOM 18 C4 U A1018 58.099 -83.846 48.869 1.00 67.46 C
ATOM 19 O4 U A1018 58.317 -84.039 47.680 1.00 67.72 O
ATOM 20 C5 U A1018 58.742 -84.569 49.903 1.00 67.75 C
ATOM 21 C6 U A1018 58.474 -84.292 51.165 1.00 67.45 C
ATOM 22 P A A1019 55.930 -86.998 55.080 1.00 69.70 P
ATOM 23 OP1 A A1019 55.878 -87.783 56.351 1.00 69.99 O
ATOM 24 OP2 A A1019 56.353 -87.673 53.821 1.00 70.18 O
ATOM 25 O5' A A1019 54.541 -86.256 54.848 1.00 69.24 O
TER
ATOM 1 O3' U B1026 53.077 -86.073 37.977 1.00 94.04 O
ATOM 2 P G B1027 54.018 -84.778 37.821 1.00 69.03 P
ATOM 3 OP1 G B1027 53.784 -84.250 36.407 1.00 69.04 O
ATOM 4 OP2 G B1027 55.395 -85.194 38.239 1.00 69.24 O
ATOM 5 O5' G B1027 53.409 -83.739 38.902 1.00 68.28 O
ATOM 6 C5' G B1027 52.860 -82.472 38.509 1.00 67.72 C
ATOM 7 C4' G B1027 51.935 -81.920 39.567 1.00 67.21 C
ATOM 8 O4' G B1027 51.761 -82.890 40.619 1.00 67.48 O
ATOM 9 C3' G B1027 52.407 -80.687 40.299 1.00 66.53 C
ATOM 10 O3' G B1027 52.187 -79.512 39.564 1.00 66.11 O
ATOM 11 C2' G B1027 51.613 -80.735 41.597 1.00 66.29 C
ATOM 12 O2' G B1027 50.305 -80.225 41.402 1.00 66.03 O
ATOM 13 C1' G B1027 51.488 -82.229 41.834 1.00 66.94 C
ATOM 14 N9 G B1027 52.383 -82.746 42.900 1.00 67.06 N
ATOM 15 C8 G B1027 53.361 -83.674 42.689 1.00 67.59 C
ATOM 16 N7 G B1027 53.980 -84.039 43.779 1.00 67.63 N
ATOM 17 C5 G B1027 53.368 -83.332 44.809 1.00 67.10 C
ATOM 18 C6 G B1027 53.637 -83.339 46.223 1.00 66.92 C
ATOM 19 O6 G B1027 54.490 -83.978 46.865 1.00 67.19 O
ATOM 20 N1 G B1027 52.781 -82.479 46.899 1.00 66.36 N
ATOM 21 C2 G B1027 51.823 -81.713 46.312 1.00 66.03 C
ATOM 22 N2 G B1027 51.117 -80.963 47.149 1.00 65.53 N
ATOM 23 N3 G B1027 51.565 -81.699 45.017 1.00 66.19 N
ATOM 24 C4 G B1027 52.364 -82.530 44.291 1.00 66.74 C
ATOM 25 P A B1028 53.302 -78.354 39.540 1.00 61.65 P
ATOM 26 OP1 A B1028 52.926 -77.387 38.453 1.00 61.40 O
ATOM 27 OP2 A B1028 54.630 -79.022 39.489 1.00 62.04 O
ATOM 28 O5' A B1028 53.129 -77.665 40.949 1.00 61.09 O
TER
Atoms:
C4: (58.099,-83.846,48.869)
N3: (57.206,-82.880,49.289)
OP1: (61.620,-87.067,54.723)
OP2: (60.982,-87.464,52.273)
C2: (56.888,-82.581,50.593)
C1': (57.337,-83.062,52.969)
C3': (57.455,-85.049,54.231)
O5': (60.257,-85.368,53.467)
O4': (58.580,-83.098,53.629)
C5': (59.927,-84.778,54.706)
P: (61.348,-86.524,53.369)
C4': (58.579,-84.135,54.641)
C2': (56.439,-84.089,53.634)
O2': (55.735,-83.435,54.660)
N1: (57.562,-83.343,51.536)
O4: (58.317,-84.039,47.680)
O2: (56.081,-81.711,50.894)
C6: (58.474,-84.292,51.165)
C5: (58.742,-84.569,49.903)
O3': (56.956,-85.785,55.321)
N3: (57.206,-82.880,49.289)
OP1: (61.620,-87.067,54.723)
OP2: (60.982,-87.464,52.273)
C2: (56.888,-82.581,50.593)
C1': (57.337,-83.062,52.969)
C3': (57.455,-85.049,54.231)
O5': (60.257,-85.368,53.467)
O4': (58.580,-83.098,53.629)
C5': (59.927,-84.778,54.706)
P: (61.348,-86.524,53.369)
C4': (58.579,-84.135,54.641)
C2': (56.439,-84.089,53.634)
O2': (55.735,-83.435,54.660)
N1: (57.562,-83.343,51.536)
O4: (58.317,-84.039,47.680)
O2: (56.081,-81.711,50.894)
C6: (58.474,-84.292,51.165)
C5: (58.742,-84.569,49.903)
O3': (56.956,-85.785,55.321)
OP1: (53.784,-84.250,36.407)
OP2: (55.395,-85.194,38.239)
C3': (52.407,-80.687,40.299)
C1': (51.488,-82.229,41.834)
C5': (52.860,-82.472,38.509)
O6: (54.490,-83.978,46.865)
O4': (51.761,-82.890,40.619)
C8: (53.361,-83.674,42.689)
C2: (51.823,-81.713,46.312)
C6: (53.637,-83.339,46.223)
C5: (53.368,-83.332,44.809)
C4: (52.364,-82.530,44.291)
P: (54.018,-84.778,37.821)
C4': (51.935,-81.920,39.567)
C2': (51.613,-80.735,41.597)
O2': (50.305,-80.225,41.402)
N1: (52.781,-82.479,46.899)
N2: (51.117,-80.963,47.149)
N3: (51.565,-81.699,45.017)
N7: (53.980,-84.039,43.779)
N9: (52.383,-82.746,42.900)
O5': (53.409,-83.739,38.902)
O3': (52.187,-79.512,39.564)
OP2: (55.395,-85.194,38.239)
C3': (52.407,-80.687,40.299)
C1': (51.488,-82.229,41.834)
C5': (52.860,-82.472,38.509)
O6: (54.490,-83.978,46.865)
O4': (51.761,-82.890,40.619)
C8: (53.361,-83.674,42.689)
C2: (51.823,-81.713,46.312)
C6: (53.637,-83.339,46.223)
C5: (53.368,-83.332,44.809)
C4: (52.364,-82.530,44.291)
P: (54.018,-84.778,37.821)
C4': (51.935,-81.920,39.567)
C2': (51.613,-80.735,41.597)
O2': (50.305,-80.225,41.402)
N1: (52.781,-82.479,46.899)
N2: (51.117,-80.963,47.149)
N3: (51.565,-81.699,45.017)
N7: (53.980,-84.039,43.779)
N9: (52.383,-82.746,42.900)
O5': (53.409,-83.739,38.902)
O3': (52.187,-79.512,39.564)
Image (generated by PyMOL):