Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A53:A344
Extra
PDB:
ATOM 1 O3' G A 52 -14.625 29.339 124.990 1.00 61.90 O
ATOM 2 P C A 53 -13.024 29.525 125.079 1.00 64.45 P
ATOM 3 OP1 C A 53 -12.447 28.297 125.663 1.00 96.32 O
ATOM 4 OP2 C A 53 -12.710 30.848 125.695 1.00 95.32 O
ATOM 5 O5' C A 53 -12.565 29.559 123.559 1.00 29.93 O
ATOM 6 C5' C A 53 -13.045 28.565 122.635 1.00 28.95 C
ATOM 7 C4' C A 53 -12.833 29.017 121.205 1.00 28.63 C
ATOM 8 O4' C A 53 -13.789 30.050 120.823 1.00 28.32 O
ATOM 9 C3' C A 53 -11.471 29.619 120.903 1.00 28.06 C
ATOM 10 O3' C A 53 -10.493 28.634 120.667 1.00 29.34 O
ATOM 11 C2' C A 53 -11.743 30.444 119.653 1.00 27.73 C
ATOM 12 O2' C A 53 -11.714 29.626 118.503 1.00 26.81 O
ATOM 13 C1' C A 53 -13.169 30.951 119.911 1.00 27.47 C
ATOM 14 N1 C A 53 -13.218 32.325 120.471 1.00 54.64 N
ATOM 15 C2 C A 53 -14.231 33.187 120.059 1.00 54.74 C
ATOM 16 O2 C A 53 -15.086 32.773 119.276 1.00 56.88 O
ATOM 17 N3 C A 53 -14.257 34.453 120.531 1.00 53.85 N
ATOM 18 C4 C A 53 -13.329 34.862 121.395 1.00 54.41 C
ATOM 19 N4 C A 53 -13.388 36.117 121.830 1.00 56.23 N
ATOM 20 C5 C A 53 -12.298 34.003 121.850 1.00 54.97 C
ATOM 21 C6 C A 53 -12.279 32.755 121.369 1.00 55.09 C
ATOM 22 P A A 54 -8.957 29.065 120.611 1.00 52.73 P
ATOM 23 OP1 A A 54 -8.173 27.922 120.076 1.00 80.33 O
ATOM 24 OP2 A A 54 -8.627 29.629 121.944 1.00 78.27 O
ATOM 25 O5' A A 54 -8.952 30.249 119.544 1.00 11.44 O
TER
ATOM 1 O3' A B 343 -11.137 45.488 115.344 1.00 7.79 O
ATOM 2 P G B 344 -9.904 44.586 115.857 1.00 20.87 P
ATOM 3 OP1 G B 344 -10.480 43.766 116.960 1.00 29.22 O
ATOM 4 OP2 G B 344 -8.659 45.385 116.097 1.00 27.23 O
ATOM 5 O5' G B 344 -9.589 43.624 114.628 1.00 17.73 O
ATOM 6 C5' G B 344 -10.650 42.875 114.028 1.00 18.75 C
ATOM 7 C4' G B 344 -10.188 41.498 113.618 1.00 18.90 C
ATOM 8 O4' G B 344 -9.408 40.876 114.669 1.00 19.34 O
ATOM 9 C3' G B 344 -11.356 40.557 113.395 1.00 18.88 C
ATOM 10 O3' G B 344 -11.865 40.681 112.078 1.00 19.19 O
ATOM 11 C2' G B 344 -10.755 39.191 113.670 1.00 19.38 C
ATOM 12 O2' G B 344 -10.046 38.698 112.553 1.00 20.70 O
ATOM 13 C1' G B 344 -9.762 39.511 114.785 1.00 20.62 C
ATOM 14 N9 G B 344 -10.294 39.301 116.126 1.00 42.30 N
ATOM 15 C8 G B 344 -10.372 40.235 117.127 1.00 42.66 C
ATOM 16 N7 G B 344 -10.860 39.757 118.237 1.00 43.63 N
ATOM 17 C5 G B 344 -11.124 38.427 117.952 1.00 43.86 C
ATOM 18 C6 G B 344 -11.648 37.407 118.772 1.00 45.09 C
ATOM 19 O6 G B 344 -11.976 37.466 119.959 1.00 46.63 O
ATOM 20 N1 G B 344 -11.769 36.213 118.084 1.00 45.71 N
ATOM 21 C2 G B 344 -11.422 36.020 116.781 1.00 45.00 C
ATOM 22 N2 G B 344 -11.631 34.787 116.299 1.00 44.70 N
ATOM 23 N3 G B 344 -10.914 36.960 116.006 1.00 44.60 N
ATOM 24 C4 G B 344 -10.795 38.131 116.651 1.00 43.27 C
ATOM 25 P C B 345 -13.443 40.539 111.832 1.00 56.07 P
ATOM 26 OP1 C B 345 -13.669 40.637 110.367 1.00 53.78 O
ATOM 27 OP2 C B 345 -14.172 41.457 112.751 1.00 55.10 O
ATOM 28 O5' C B 345 -13.749 39.057 112.324 1.00 32.00 O
TER
ATOM 2 P C A 53 -13.024 29.525 125.079 1.00 64.45 P
ATOM 3 OP1 C A 53 -12.447 28.297 125.663 1.00 96.32 O
ATOM 4 OP2 C A 53 -12.710 30.848 125.695 1.00 95.32 O
ATOM 5 O5' C A 53 -12.565 29.559 123.559 1.00 29.93 O
ATOM 6 C5' C A 53 -13.045 28.565 122.635 1.00 28.95 C
ATOM 7 C4' C A 53 -12.833 29.017 121.205 1.00 28.63 C
ATOM 8 O4' C A 53 -13.789 30.050 120.823 1.00 28.32 O
ATOM 9 C3' C A 53 -11.471 29.619 120.903 1.00 28.06 C
ATOM 10 O3' C A 53 -10.493 28.634 120.667 1.00 29.34 O
ATOM 11 C2' C A 53 -11.743 30.444 119.653 1.00 27.73 C
ATOM 12 O2' C A 53 -11.714 29.626 118.503 1.00 26.81 O
ATOM 13 C1' C A 53 -13.169 30.951 119.911 1.00 27.47 C
ATOM 14 N1 C A 53 -13.218 32.325 120.471 1.00 54.64 N
ATOM 15 C2 C A 53 -14.231 33.187 120.059 1.00 54.74 C
ATOM 16 O2 C A 53 -15.086 32.773 119.276 1.00 56.88 O
ATOM 17 N3 C A 53 -14.257 34.453 120.531 1.00 53.85 N
ATOM 18 C4 C A 53 -13.329 34.862 121.395 1.00 54.41 C
ATOM 19 N4 C A 53 -13.388 36.117 121.830 1.00 56.23 N
ATOM 20 C5 C A 53 -12.298 34.003 121.850 1.00 54.97 C
ATOM 21 C6 C A 53 -12.279 32.755 121.369 1.00 55.09 C
ATOM 22 P A A 54 -8.957 29.065 120.611 1.00 52.73 P
ATOM 23 OP1 A A 54 -8.173 27.922 120.076 1.00 80.33 O
ATOM 24 OP2 A A 54 -8.627 29.629 121.944 1.00 78.27 O
ATOM 25 O5' A A 54 -8.952 30.249 119.544 1.00 11.44 O
TER
ATOM 1 O3' A B 343 -11.137 45.488 115.344 1.00 7.79 O
ATOM 2 P G B 344 -9.904 44.586 115.857 1.00 20.87 P
ATOM 3 OP1 G B 344 -10.480 43.766 116.960 1.00 29.22 O
ATOM 4 OP2 G B 344 -8.659 45.385 116.097 1.00 27.23 O
ATOM 5 O5' G B 344 -9.589 43.624 114.628 1.00 17.73 O
ATOM 6 C5' G B 344 -10.650 42.875 114.028 1.00 18.75 C
ATOM 7 C4' G B 344 -10.188 41.498 113.618 1.00 18.90 C
ATOM 8 O4' G B 344 -9.408 40.876 114.669 1.00 19.34 O
ATOM 9 C3' G B 344 -11.356 40.557 113.395 1.00 18.88 C
ATOM 10 O3' G B 344 -11.865 40.681 112.078 1.00 19.19 O
ATOM 11 C2' G B 344 -10.755 39.191 113.670 1.00 19.38 C
ATOM 12 O2' G B 344 -10.046 38.698 112.553 1.00 20.70 O
ATOM 13 C1' G B 344 -9.762 39.511 114.785 1.00 20.62 C
ATOM 14 N9 G B 344 -10.294 39.301 116.126 1.00 42.30 N
ATOM 15 C8 G B 344 -10.372 40.235 117.127 1.00 42.66 C
ATOM 16 N7 G B 344 -10.860 39.757 118.237 1.00 43.63 N
ATOM 17 C5 G B 344 -11.124 38.427 117.952 1.00 43.86 C
ATOM 18 C6 G B 344 -11.648 37.407 118.772 1.00 45.09 C
ATOM 19 O6 G B 344 -11.976 37.466 119.959 1.00 46.63 O
ATOM 20 N1 G B 344 -11.769 36.213 118.084 1.00 45.71 N
ATOM 21 C2 G B 344 -11.422 36.020 116.781 1.00 45.00 C
ATOM 22 N2 G B 344 -11.631 34.787 116.299 1.00 44.70 N
ATOM 23 N3 G B 344 -10.914 36.960 116.006 1.00 44.60 N
ATOM 24 C4 G B 344 -10.795 38.131 116.651 1.00 43.27 C
ATOM 25 P C B 345 -13.443 40.539 111.832 1.00 56.07 P
ATOM 26 OP1 C B 345 -13.669 40.637 110.367 1.00 53.78 O
ATOM 27 OP2 C B 345 -14.172 41.457 112.751 1.00 55.10 O
ATOM 28 O5' C B 345 -13.749 39.057 112.324 1.00 32.00 O
TER
Atoms:
C2: (-14.231,33.187,120.059)
OP1: (-12.447,28.297,125.663)
OP2: (-12.710,30.848,125.695)
C4: (-13.329,34.862,121.395)
O5': (-12.565,29.559,123.559)
C3': (-11.471,29.619,120.903)
C1': (-13.169,30.951,119.911)
O4': (-13.789,30.050,120.823)
C5': (-13.045,28.565,122.635)
P: (-13.024,29.525,125.079)
O2: (-15.086,32.773,119.276)
C4': (-12.833,29.017,121.205)
C2': (-11.743,30.444,119.653)
O2': (-11.714,29.626,118.503)
N1: (-13.218,32.325,120.471)
N3: (-14.257,34.453,120.531)
N4: (-13.388,36.117,121.830)
C6: (-12.279,32.755,121.369)
C5: (-12.298,34.003,121.850)
O3': (-10.493,28.634,120.667)
OP1: (-12.447,28.297,125.663)
OP2: (-12.710,30.848,125.695)
C4: (-13.329,34.862,121.395)
O5': (-12.565,29.559,123.559)
C3': (-11.471,29.619,120.903)
C1': (-13.169,30.951,119.911)
O4': (-13.789,30.050,120.823)
C5': (-13.045,28.565,122.635)
P: (-13.024,29.525,125.079)
O2: (-15.086,32.773,119.276)
C4': (-12.833,29.017,121.205)
C2': (-11.743,30.444,119.653)
O2': (-11.714,29.626,118.503)
N1: (-13.218,32.325,120.471)
N3: (-14.257,34.453,120.531)
N4: (-13.388,36.117,121.830)
C6: (-12.279,32.755,121.369)
C5: (-12.298,34.003,121.850)
O3': (-10.493,28.634,120.667)
OP1: (-10.480,43.766,116.960)
OP2: (-8.659,45.385,116.097)
C3': (-11.356,40.557,113.395)
C1': (-9.762,39.511,114.785)
C5': (-10.650,42.875,114.028)
O6: (-11.976,37.466,119.959)
O4': (-9.408,40.876,114.669)
C8: (-10.372,40.235,117.127)
C2: (-11.422,36.020,116.781)
C6: (-11.648,37.407,118.772)
C5: (-11.124,38.427,117.952)
C4: (-10.795,38.131,116.651)
P: (-9.904,44.586,115.857)
C4': (-10.188,41.498,113.618)
C2': (-10.755,39.191,113.670)
O2': (-10.046,38.698,112.553)
N1: (-11.769,36.213,118.084)
N2: (-11.631,34.787,116.299)
N3: (-10.914,36.960,116.006)
N7: (-10.860,39.757,118.237)
N9: (-10.294,39.301,116.126)
O5': (-9.589,43.624,114.628)
O3': (-11.865,40.681,112.078)
OP2: (-8.659,45.385,116.097)
C3': (-11.356,40.557,113.395)
C1': (-9.762,39.511,114.785)
C5': (-10.650,42.875,114.028)
O6: (-11.976,37.466,119.959)
O4': (-9.408,40.876,114.669)
C8: (-10.372,40.235,117.127)
C2: (-11.422,36.020,116.781)
C6: (-11.648,37.407,118.772)
C5: (-11.124,38.427,117.952)
C4: (-10.795,38.131,116.651)
P: (-9.904,44.586,115.857)
C4': (-10.188,41.498,113.618)
C2': (-10.755,39.191,113.670)
O2': (-10.046,38.698,112.553)
N1: (-11.769,36.213,118.084)
N2: (-11.631,34.787,116.299)
N3: (-10.914,36.960,116.006)
N7: (-10.860,39.757,118.237)
N9: (-10.294,39.301,116.126)
O5': (-9.589,43.624,114.628)
O3': (-11.865,40.681,112.078)
Image (generated by PyMOL):