Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11704:11709
Extra
PDB:
ATOM 1 O3' C A1703 47.350 82.452 128.833 1.00149.20 O
ATOM 2 P A A1704 48.621 82.771 127.899 1.00164.57 P
ATOM 3 OP1 A A1704 48.911 84.225 128.028 1.00165.51 O
ATOM 4 OP2 A A1704 48.323 82.216 126.548 1.00163.65 O
ATOM 5 O5' A A1704 49.780 81.925 128.585 1.00164.42 O
ATOM 6 C5' A A1704 50.205 80.689 128.035 1.00163.48 C
ATOM 7 C4' A A1704 50.556 79.700 129.114 1.00163.40 C
ATOM 8 O4' A A1704 49.404 78.863 129.405 1.00162.99 O
ATOM 9 C3' A A1704 51.657 78.708 128.773 1.00162.74 C
ATOM 10 O3' A A1704 52.960 79.245 128.942 1.00163.20 O
ATOM 11 C2' A A1704 51.347 77.545 129.704 1.00162.48 C
ATOM 12 O2' A A1704 51.743 77.847 131.033 1.00163.26 O
ATOM 13 C1' A A1704 49.823 77.537 129.657 1.00162.37 C
ATOM 14 N9 A A1704 49.301 76.660 128.577 1.00161.38 N
ATOM 15 C8 A A1704 48.513 77.030 127.506 1.00161.10 C
ATOM 16 N7 A A1704 48.195 76.038 126.706 1.00160.19 N
ATOM 17 C5 A A1704 48.807 74.926 127.283 1.00159.85 C
ATOM 18 C6 A A1704 48.852 73.561 126.918 1.00158.97 C
ATOM 19 N6 A A1704 48.240 73.056 125.842 1.00158.22 N
ATOM 20 N1 A A1704 49.552 72.711 127.707 1.00158.88 N
ATOM 21 C2 A A1704 50.169 73.196 128.789 1.00159.63 C
ATOM 22 N3 A A1704 50.198 74.449 129.234 1.00160.50 N
ATOM 23 C4 A A1704 49.493 75.287 128.435 1.00160.58 C
ATOM 24 P C A1705 54.127 78.911 127.881 1.00234.91 P
ATOM 25 OP1 C A1705 55.338 79.658 128.309 1.00235.61 O
ATOM 26 OP2 C A1705 53.575 79.168 126.525 1.00234.44 O
ATOM 27 O5' C A1705 54.355 77.348 128.089 1.00234.14 O
TER
ATOM 1 O3' U B1708 53.251 61.838 128.842 1.00283.17 O
ATOM 2 P U B1709 51.892 61.833 129.746 1.00225.92 P
ATOM 3 OP1 U B1709 52.108 62.716 130.914 1.00226.86 O
ATOM 4 OP2 U B1709 51.562 60.413 130.001 1.00225.37 O
ATOM 5 O5' U B1709 50.774 62.467 128.785 1.00225.73 O
ATOM 6 C5' U B1709 50.996 63.662 128.034 1.00225.98 C
ATOM 7 C4' U B1709 51.399 64.827 128.909 1.00226.94 C
ATOM 8 O4' U B1709 52.228 65.744 128.155 1.00227.11 O
ATOM 9 C3' U B1709 50.278 65.701 129.444 1.00227.53 C
ATOM 10 O3' U B1709 49.636 65.135 130.578 1.00227.72 O
ATOM 11 C2' U B1709 50.995 67.021 129.744 1.00228.35 C
ATOM 12 O2' U B1709 51.618 66.983 131.022 1.00228.93 O
ATOM 13 C1' U B1709 52.089 67.049 128.672 1.00227.96 C
ATOM 14 N1 U B1709 51.770 67.975 127.568 1.00227.93 N
ATOM 15 C2 U B1709 52.339 69.238 127.631 1.00228.62 C
ATOM 16 O2 U B1709 53.079 69.605 128.530 1.00229.24 O
ATOM 17 N3 U B1709 52.011 70.058 126.583 1.00228.58 N
ATOM 18 C4 U B1709 51.189 69.745 125.516 1.00227.92 C
ATOM 19 O4 U B1709 50.988 70.594 124.648 1.00227.99 O
ATOM 20 C5 U B1709 50.641 68.422 125.530 1.00227.23 C
ATOM 21 C6 U B1709 50.943 67.598 126.535 1.00227.25 C
ATOM 22 P G B1710 48.038 64.948 130.608 1.00196.26 P
ATOM 23 OP1 G B1710 47.753 63.520 130.293 1.00195.42 O
ATOM 24 OP2 G B1710 47.458 66.002 129.734 1.00196.36 O
ATOM 25 O5' G B1710 47.680 65.248 132.131 1.00197.06 O
TER
ATOM 2 P A A1704 48.621 82.771 127.899 1.00164.57 P
ATOM 3 OP1 A A1704 48.911 84.225 128.028 1.00165.51 O
ATOM 4 OP2 A A1704 48.323 82.216 126.548 1.00163.65 O
ATOM 5 O5' A A1704 49.780 81.925 128.585 1.00164.42 O
ATOM 6 C5' A A1704 50.205 80.689 128.035 1.00163.48 C
ATOM 7 C4' A A1704 50.556 79.700 129.114 1.00163.40 C
ATOM 8 O4' A A1704 49.404 78.863 129.405 1.00162.99 O
ATOM 9 C3' A A1704 51.657 78.708 128.773 1.00162.74 C
ATOM 10 O3' A A1704 52.960 79.245 128.942 1.00163.20 O
ATOM 11 C2' A A1704 51.347 77.545 129.704 1.00162.48 C
ATOM 12 O2' A A1704 51.743 77.847 131.033 1.00163.26 O
ATOM 13 C1' A A1704 49.823 77.537 129.657 1.00162.37 C
ATOM 14 N9 A A1704 49.301 76.660 128.577 1.00161.38 N
ATOM 15 C8 A A1704 48.513 77.030 127.506 1.00161.10 C
ATOM 16 N7 A A1704 48.195 76.038 126.706 1.00160.19 N
ATOM 17 C5 A A1704 48.807 74.926 127.283 1.00159.85 C
ATOM 18 C6 A A1704 48.852 73.561 126.918 1.00158.97 C
ATOM 19 N6 A A1704 48.240 73.056 125.842 1.00158.22 N
ATOM 20 N1 A A1704 49.552 72.711 127.707 1.00158.88 N
ATOM 21 C2 A A1704 50.169 73.196 128.789 1.00159.63 C
ATOM 22 N3 A A1704 50.198 74.449 129.234 1.00160.50 N
ATOM 23 C4 A A1704 49.493 75.287 128.435 1.00160.58 C
ATOM 24 P C A1705 54.127 78.911 127.881 1.00234.91 P
ATOM 25 OP1 C A1705 55.338 79.658 128.309 1.00235.61 O
ATOM 26 OP2 C A1705 53.575 79.168 126.525 1.00234.44 O
ATOM 27 O5' C A1705 54.355 77.348 128.089 1.00234.14 O
TER
ATOM 1 O3' U B1708 53.251 61.838 128.842 1.00283.17 O
ATOM 2 P U B1709 51.892 61.833 129.746 1.00225.92 P
ATOM 3 OP1 U B1709 52.108 62.716 130.914 1.00226.86 O
ATOM 4 OP2 U B1709 51.562 60.413 130.001 1.00225.37 O
ATOM 5 O5' U B1709 50.774 62.467 128.785 1.00225.73 O
ATOM 6 C5' U B1709 50.996 63.662 128.034 1.00225.98 C
ATOM 7 C4' U B1709 51.399 64.827 128.909 1.00226.94 C
ATOM 8 O4' U B1709 52.228 65.744 128.155 1.00227.11 O
ATOM 9 C3' U B1709 50.278 65.701 129.444 1.00227.53 C
ATOM 10 O3' U B1709 49.636 65.135 130.578 1.00227.72 O
ATOM 11 C2' U B1709 50.995 67.021 129.744 1.00228.35 C
ATOM 12 O2' U B1709 51.618 66.983 131.022 1.00228.93 O
ATOM 13 C1' U B1709 52.089 67.049 128.672 1.00227.96 C
ATOM 14 N1 U B1709 51.770 67.975 127.568 1.00227.93 N
ATOM 15 C2 U B1709 52.339 69.238 127.631 1.00228.62 C
ATOM 16 O2 U B1709 53.079 69.605 128.530 1.00229.24 O
ATOM 17 N3 U B1709 52.011 70.058 126.583 1.00228.58 N
ATOM 18 C4 U B1709 51.189 69.745 125.516 1.00227.92 C
ATOM 19 O4 U B1709 50.988 70.594 124.648 1.00227.99 O
ATOM 20 C5 U B1709 50.641 68.422 125.530 1.00227.23 C
ATOM 21 C6 U B1709 50.943 67.598 126.535 1.00227.25 C
ATOM 22 P G B1710 48.038 64.948 130.608 1.00196.26 P
ATOM 23 OP1 G B1710 47.753 63.520 130.293 1.00195.42 O
ATOM 24 OP2 G B1710 47.458 66.002 129.734 1.00196.36 O
ATOM 25 O5' G B1710 47.680 65.248 132.131 1.00197.06 O
TER
Atoms:
OP1: (48.911,84.225,128.028)
OP2: (48.323,82.216,126.548)
C3': (51.657,78.708,128.773)
C1': (49.823,77.537,129.657)
C5': (50.205,80.689,128.035)
O4': (49.404,78.863,129.405)
C8: (48.513,77.030,127.506)
O2': (51.743,77.847,131.033)
C6: (48.852,73.561,126.918)
C5: (48.807,74.926,127.283)
C4: (49.493,75.287,128.435)
P: (48.621,82.771,127.899)
C4': (50.556,79.700,129.114)
C2': (51.347,77.545,129.704)
C2: (50.169,73.196,128.789)
N1: (49.552,72.711,127.707)
N3: (50.198,74.449,129.234)
N6: (48.240,73.056,125.842)
N7: (48.195,76.038,126.706)
N9: (49.301,76.660,128.577)
O5': (49.780,81.925,128.585)
O3': (52.960,79.245,128.942)
OP2: (48.323,82.216,126.548)
C3': (51.657,78.708,128.773)
C1': (49.823,77.537,129.657)
C5': (50.205,80.689,128.035)
O4': (49.404,78.863,129.405)
C8: (48.513,77.030,127.506)
O2': (51.743,77.847,131.033)
C6: (48.852,73.561,126.918)
C5: (48.807,74.926,127.283)
C4: (49.493,75.287,128.435)
P: (48.621,82.771,127.899)
C4': (50.556,79.700,129.114)
C2': (51.347,77.545,129.704)
C2: (50.169,73.196,128.789)
N1: (49.552,72.711,127.707)
N3: (50.198,74.449,129.234)
N6: (48.240,73.056,125.842)
N7: (48.195,76.038,126.706)
N9: (49.301,76.660,128.577)
O5': (49.780,81.925,128.585)
O3': (52.960,79.245,128.942)
C4: (51.189,69.745,125.516)
N3: (52.011,70.058,126.583)
OP1: (52.108,62.716,130.914)
OP2: (51.562,60.413,130.001)
C2: (52.339,69.238,127.631)
C1': (52.089,67.049,128.672)
C3': (50.278,65.701,129.444)
O5': (50.774,62.467,128.785)
O4': (52.228,65.744,128.155)
C5': (50.996,63.662,128.034)
P: (51.892,61.833,129.746)
C4': (51.399,64.827,128.909)
C2': (50.995,67.021,129.744)
O2': (51.618,66.983,131.022)
N1: (51.770,67.975,127.568)
O4: (50.988,70.594,124.648)
O2: (53.079,69.605,128.530)
C6: (50.943,67.598,126.535)
C5: (50.641,68.422,125.530)
O3': (49.636,65.135,130.578)
N3: (52.011,70.058,126.583)
OP1: (52.108,62.716,130.914)
OP2: (51.562,60.413,130.001)
C2: (52.339,69.238,127.631)
C1': (52.089,67.049,128.672)
C3': (50.278,65.701,129.444)
O5': (50.774,62.467,128.785)
O4': (52.228,65.744,128.155)
C5': (50.996,63.662,128.034)
P: (51.892,61.833,129.746)
C4': (51.399,64.827,128.909)
C2': (50.995,67.021,129.744)
O2': (51.618,66.983,131.022)
N1: (51.770,67.975,127.568)
O4: (50.988,70.594,124.648)
O2: (53.079,69.605,128.530)
C6: (50.943,67.598,126.535)
C5: (50.641,68.422,125.530)
O3': (49.636,65.135,130.578)
Image (generated by PyMOL):