Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12613:12582
Extra
PDB:
ATOM 1 O3' U A2612 19.036 5.772 44.531 1.00 64.67 O
ATOM 2 P U A2613 18.756 4.302 43.963 1.00 46.48 P
ATOM 3 OP1 U A2613 20.009 3.540 44.056 1.00 46.25 O
ATOM 4 OP2 U A2613 18.115 4.458 42.612 1.00 46.79 O
ATOM 5 O5' U A2613 17.722 3.710 45.026 1.00 46.41 O
ATOM 6 C5' U A2613 16.561 4.418 45.426 1.00 46.57 C
ATOM 7 C4' U A2613 15.348 3.530 45.361 1.00 46.68 C
ATOM 8 O4' U A2613 15.145 3.088 44.001 1.00 46.88 O
ATOM 9 C3' U A2613 15.425 2.244 46.137 1.00 46.46 C
ATOM 10 O3' U A2613 15.142 2.437 47.487 1.00 46.34 O
ATOM 11 C2' U A2613 14.385 1.387 45.442 1.00 46.65 C
ATOM 12 O2' U A2613 13.099 1.769 45.860 1.00 46.81 O
ATOM 13 C1' U A2613 14.545 1.815 43.995 1.00 46.87 C
ATOM 14 N1 U A2613 15.400 0.900 43.221 1.00 46.81 N
ATOM 15 C2 U A2613 15.019 -0.401 42.973 1.00 46.83 C
ATOM 16 O2 U A2613 14.025 -0.850 43.428 1.00 46.88 O
ATOM 17 N3 U A2613 15.889 -1.169 42.218 1.00 46.78 N
ATOM 18 C4 U A2613 17.065 -0.767 41.636 1.00 46.74 C
ATOM 19 O4 U A2613 17.716 -1.541 40.980 1.00 46.72 O
ATOM 20 C5 U A2613 17.387 0.591 41.895 1.00 46.72 C
ATOM 21 C6 U A2613 16.585 1.366 42.664 1.00 46.76 C
ATOM 22 P U A2614 16.075 1.785 48.634 1.00 47.75 P
ATOM 23 OP1 U A2614 15.609 2.362 49.923 1.00 47.70 O
ATOM 24 OP2 U A2614 17.504 1.991 48.252 1.00 47.62 O
ATOM 25 O5' U A2614 15.722 0.229 48.551 1.00 47.71 O
TER
ATOM 1 O3' U B2581 10.434 -5.680 39.590 1.00 39.96 O
ATOM 2 P G B2582 9.831 -4.821 38.381 1.00 43.84 P
ATOM 3 OP1 G B2582 8.341 -5.080 38.374 1.00 44.09 O
ATOM 4 OP2 G B2582 10.614 -5.131 37.157 1.00 43.94 O
ATOM 5 O5' G B2582 10.164 -3.338 38.843 1.00 43.74 O
ATOM 6 C5' G B2582 10.030 -2.953 40.175 1.00 43.53 C
ATOM 7 C4' G B2582 10.652 -1.623 40.399 1.00 43.44 C
ATOM 8 O4' G B2582 12.071 -1.777 40.667 1.00 43.15 O
ATOM 9 C3' G B2582 10.613 -0.656 39.229 1.00 43.71 C
ATOM 10 O3' G B2582 9.328 -0.066 39.048 1.00 43.99 O
ATOM 11 C2' G B2582 11.688 0.334 39.647 1.00 43.51 C
ATOM 12 O2' G B2582 11.182 1.173 40.658 1.00 43.46 O
ATOM 13 C1' G B2582 12.754 -0.604 40.269 1.00 43.17 C
ATOM 14 N9 G B2582 13.779 -0.974 39.273 1.00 43.17 N
ATOM 15 C8 G B2582 13.844 -2.116 38.529 1.00 43.25 C
ATOM 16 N7 G B2582 14.831 -2.127 37.660 1.00 43.26 N
ATOM 17 C5 G B2582 15.437 -0.899 37.817 1.00 43.20 C
ATOM 18 C6 G B2582 16.533 -0.325 37.139 1.00 43.20 C
ATOM 19 O6 G B2582 17.218 -0.800 36.258 1.00 43.25 O
ATOM 20 N1 G B2582 16.812 0.928 37.597 1.00 43.14 N
ATOM 21 C2 G B2582 16.090 1.532 38.590 1.00 43.10 C
ATOM 22 N2 G B2582 16.447 2.751 38.961 1.00 43.06 N
ATOM 23 N3 G B2582 15.062 1.035 39.229 1.00 43.10 N
ATOM 24 C4 G B2582 14.792 -0.191 38.798 1.00 43.15 C
ATOM 25 P G B2583 8.859 0.528 37.620 1.00 46.84 P
ATOM 26 OP1 G B2583 7.568 1.188 37.845 1.00 47.07 O
ATOM 27 OP2 G B2583 8.953 -0.558 36.622 1.00 46.96 O
ATOM 28 O5' G B2583 9.948 1.632 37.304 1.00 46.78 O
TER
ATOM 2 P U A2613 18.756 4.302 43.963 1.00 46.48 P
ATOM 3 OP1 U A2613 20.009 3.540 44.056 1.00 46.25 O
ATOM 4 OP2 U A2613 18.115 4.458 42.612 1.00 46.79 O
ATOM 5 O5' U A2613 17.722 3.710 45.026 1.00 46.41 O
ATOM 6 C5' U A2613 16.561 4.418 45.426 1.00 46.57 C
ATOM 7 C4' U A2613 15.348 3.530 45.361 1.00 46.68 C
ATOM 8 O4' U A2613 15.145 3.088 44.001 1.00 46.88 O
ATOM 9 C3' U A2613 15.425 2.244 46.137 1.00 46.46 C
ATOM 10 O3' U A2613 15.142 2.437 47.487 1.00 46.34 O
ATOM 11 C2' U A2613 14.385 1.387 45.442 1.00 46.65 C
ATOM 12 O2' U A2613 13.099 1.769 45.860 1.00 46.81 O
ATOM 13 C1' U A2613 14.545 1.815 43.995 1.00 46.87 C
ATOM 14 N1 U A2613 15.400 0.900 43.221 1.00 46.81 N
ATOM 15 C2 U A2613 15.019 -0.401 42.973 1.00 46.83 C
ATOM 16 O2 U A2613 14.025 -0.850 43.428 1.00 46.88 O
ATOM 17 N3 U A2613 15.889 -1.169 42.218 1.00 46.78 N
ATOM 18 C4 U A2613 17.065 -0.767 41.636 1.00 46.74 C
ATOM 19 O4 U A2613 17.716 -1.541 40.980 1.00 46.72 O
ATOM 20 C5 U A2613 17.387 0.591 41.895 1.00 46.72 C
ATOM 21 C6 U A2613 16.585 1.366 42.664 1.00 46.76 C
ATOM 22 P U A2614 16.075 1.785 48.634 1.00 47.75 P
ATOM 23 OP1 U A2614 15.609 2.362 49.923 1.00 47.70 O
ATOM 24 OP2 U A2614 17.504 1.991 48.252 1.00 47.62 O
ATOM 25 O5' U A2614 15.722 0.229 48.551 1.00 47.71 O
TER
ATOM 1 O3' U B2581 10.434 -5.680 39.590 1.00 39.96 O
ATOM 2 P G B2582 9.831 -4.821 38.381 1.00 43.84 P
ATOM 3 OP1 G B2582 8.341 -5.080 38.374 1.00 44.09 O
ATOM 4 OP2 G B2582 10.614 -5.131 37.157 1.00 43.94 O
ATOM 5 O5' G B2582 10.164 -3.338 38.843 1.00 43.74 O
ATOM 6 C5' G B2582 10.030 -2.953 40.175 1.00 43.53 C
ATOM 7 C4' G B2582 10.652 -1.623 40.399 1.00 43.44 C
ATOM 8 O4' G B2582 12.071 -1.777 40.667 1.00 43.15 O
ATOM 9 C3' G B2582 10.613 -0.656 39.229 1.00 43.71 C
ATOM 10 O3' G B2582 9.328 -0.066 39.048 1.00 43.99 O
ATOM 11 C2' G B2582 11.688 0.334 39.647 1.00 43.51 C
ATOM 12 O2' G B2582 11.182 1.173 40.658 1.00 43.46 O
ATOM 13 C1' G B2582 12.754 -0.604 40.269 1.00 43.17 C
ATOM 14 N9 G B2582 13.779 -0.974 39.273 1.00 43.17 N
ATOM 15 C8 G B2582 13.844 -2.116 38.529 1.00 43.25 C
ATOM 16 N7 G B2582 14.831 -2.127 37.660 1.00 43.26 N
ATOM 17 C5 G B2582 15.437 -0.899 37.817 1.00 43.20 C
ATOM 18 C6 G B2582 16.533 -0.325 37.139 1.00 43.20 C
ATOM 19 O6 G B2582 17.218 -0.800 36.258 1.00 43.25 O
ATOM 20 N1 G B2582 16.812 0.928 37.597 1.00 43.14 N
ATOM 21 C2 G B2582 16.090 1.532 38.590 1.00 43.10 C
ATOM 22 N2 G B2582 16.447 2.751 38.961 1.00 43.06 N
ATOM 23 N3 G B2582 15.062 1.035 39.229 1.00 43.10 N
ATOM 24 C4 G B2582 14.792 -0.191 38.798 1.00 43.15 C
ATOM 25 P G B2583 8.859 0.528 37.620 1.00 46.84 P
ATOM 26 OP1 G B2583 7.568 1.188 37.845 1.00 47.07 O
ATOM 27 OP2 G B2583 8.953 -0.558 36.622 1.00 46.96 O
ATOM 28 O5' G B2583 9.948 1.632 37.304 1.00 46.78 O
TER
Atoms:
C4: (17.065,-0.767,41.636)
N3: (15.889,-1.169,42.218)
OP1: (20.009,3.540,44.056)
OP2: (18.115,4.458,42.612)
C2: (15.019,-0.401,42.973)
C1': (14.545,1.815,43.995)
C3': (15.425,2.244,46.137)
O5': (17.722,3.710,45.026)
O4': (15.145,3.088,44.001)
C5': (16.561,4.418,45.426)
P: (18.756,4.302,43.963)
C4': (15.348,3.530,45.361)
C2': (14.385,1.387,45.442)
O2': (13.099,1.769,45.860)
N1: (15.400,0.900,43.221)
O4: (17.716,-1.541,40.980)
O2: (14.025,-0.850,43.428)
C6: (16.585,1.366,42.664)
C5: (17.387,0.591,41.895)
O3': (15.142,2.437,47.487)
N3: (15.889,-1.169,42.218)
OP1: (20.009,3.540,44.056)
OP2: (18.115,4.458,42.612)
C2: (15.019,-0.401,42.973)
C1': (14.545,1.815,43.995)
C3': (15.425,2.244,46.137)
O5': (17.722,3.710,45.026)
O4': (15.145,3.088,44.001)
C5': (16.561,4.418,45.426)
P: (18.756,4.302,43.963)
C4': (15.348,3.530,45.361)
C2': (14.385,1.387,45.442)
O2': (13.099,1.769,45.860)
N1: (15.400,0.900,43.221)
O4: (17.716,-1.541,40.980)
O2: (14.025,-0.850,43.428)
C6: (16.585,1.366,42.664)
C5: (17.387,0.591,41.895)
O3': (15.142,2.437,47.487)
OP1: (8.341,-5.080,38.374)
OP2: (10.614,-5.131,37.157)
C3': (10.613,-0.656,39.229)
C1': (12.754,-0.604,40.269)
C5': (10.030,-2.953,40.175)
O6: (17.218,-0.800,36.258)
O4': (12.071,-1.777,40.667)
C8: (13.844,-2.116,38.529)
C2: (16.090,1.532,38.590)
C6: (16.533,-0.325,37.139)
C5: (15.437,-0.899,37.817)
C4: (14.792,-0.191,38.798)
P: (9.831,-4.821,38.381)
C4': (10.652,-1.623,40.399)
C2': (11.688,0.334,39.647)
O2': (11.182,1.173,40.658)
N1: (16.812,0.928,37.597)
N2: (16.447,2.751,38.961)
N3: (15.062,1.035,39.229)
N7: (14.831,-2.127,37.660)
N9: (13.779,-0.974,39.273)
O5': (10.164,-3.338,38.843)
O3': (9.328,-0.066,39.048)
OP2: (10.614,-5.131,37.157)
C3': (10.613,-0.656,39.229)
C1': (12.754,-0.604,40.269)
C5': (10.030,-2.953,40.175)
O6: (17.218,-0.800,36.258)
O4': (12.071,-1.777,40.667)
C8: (13.844,-2.116,38.529)
C2: (16.090,1.532,38.590)
C6: (16.533,-0.325,37.139)
C5: (15.437,-0.899,37.817)
C4: (14.792,-0.191,38.798)
P: (9.831,-4.821,38.381)
C4': (10.652,-1.623,40.399)
C2': (11.688,0.334,39.647)
O2': (11.182,1.173,40.658)
N1: (16.812,0.928,37.597)
N2: (16.447,2.751,38.961)
N3: (15.062,1.035,39.229)
N7: (14.831,-2.127,37.660)
N9: (13.779,-0.974,39.273)
O5': (10.164,-3.338,38.843)
O3': (9.328,-0.066,39.048)
Image (generated by PyMOL):