Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A90:A39
Extra
PDB:
ATOM 1 O3' U A 89 -2.368 36.507 -10.198 1.00 48.88 O
ATOM 2 P U A 90 -3.198 36.572 -11.562 1.00 51.54 P
ATOM 3 OP1 U A 90 -2.814 35.429 -12.426 1.00 48.66 O
ATOM 4 OP2 U A 90 -3.095 37.947 -12.101 1.00 48.41 O
ATOM 5 O5' U A 90 -4.676 36.295 -11.016 1.00 52.90 O
ATOM 6 C5' U A 90 -5.616 37.337 -10.828 1.00 48.90 C
ATOM 7 C4' U A 90 -6.744 37.171 -11.826 1.00 46.97 C
ATOM 8 O4' U A 90 -7.518 38.386 -11.780 1.00 52.96 O
ATOM 9 C3' U A 90 -6.237 37.001 -13.255 1.00 49.49 C
ATOM 10 O3' U A 90 -6.458 35.651 -13.811 1.00 51.39 O
ATOM 11 C2' U A 90 -6.747 38.215 -14.040 1.00 48.46 C
ATOM 12 O2' U A 90 -7.583 37.885 -15.125 1.00 51.31 O
ATOM 13 C1' U A 90 -7.505 39.061 -13.017 1.00 51.71 C
ATOM 14 N1 U A 90 -6.913 40.426 -12.856 1.00 53.85 N
ATOM 15 C2 U A 90 -7.695 41.538 -13.098 1.00 54.14 C
ATOM 16 O2 U A 90 -8.863 41.471 -13.422 1.00 53.95 O
ATOM 17 N3 U A 90 -7.065 42.748 -12.947 1.00 56.01 N
ATOM 18 C4 U A 90 -5.749 42.960 -12.586 1.00 55.68 C
ATOM 19 O4 U A 90 -5.325 44.106 -12.489 1.00 56.29 O
ATOM 20 C5 U A 90 -4.991 41.757 -12.353 1.00 55.22 C
ATOM 21 C6 U A 90 -5.587 40.562 -12.497 1.00 56.54 C
ATOM 22 P C A 91 -7.733 35.023 -14.561 1.00 48.20 P
ATOM 23 OP1 C A 91 -8.928 35.309 -13.735 1.00 52.04 O
ATOM 24 OP2 C A 91 -7.396 33.620 -14.882 1.00 47.02 O
ATOM 25 O5' C A 91 -7.836 35.790 -15.957 1.00 45.13 O
TER
ATOM 1 O3' A B 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 2 P G B 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 3 OP1 G B 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 4 OP2 G B 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 5 O5' G B 39 -11.810 37.529 -8.199 1.00 50.17 O
ATOM 6 C5' G B 39 -10.936 36.488 -8.619 1.00 49.32 C
ATOM 7 C4' G B 39 -9.495 36.947 -8.555 1.00 49.28 C
ATOM 8 O4' G B 39 -9.291 37.967 -9.569 1.00 50.11 O
ATOM 9 C3' G B 39 -9.104 37.550 -7.212 1.00 49.21 C
ATOM 10 O3' G B 39 -7.791 37.151 -6.836 1.00 51.85 O
ATOM 11 C2' G B 39 -9.204 39.041 -7.506 1.00 50.46 C
ATOM 12 O2' G B 39 -8.381 39.845 -6.687 1.00 52.08 O
ATOM 13 C1' G B 39 -8.772 39.126 -8.966 1.00 50.87 C
ATOM 14 N9 G B 39 -9.399 40.292 -9.560 1.00 51.97 N
ATOM 15 C8 G B 39 -10.649 40.375 -10.121 1.00 52.44 C
ATOM 16 N7 G B 39 -10.949 41.574 -10.540 1.00 52.41 N
ATOM 17 C5 G B 39 -9.829 42.331 -10.227 1.00 53.41 C
ATOM 18 C6 G B 39 -9.564 43.704 -10.437 1.00 56.23 C
ATOM 19 O6 G B 39 -10.288 44.561 -10.961 1.00 59.37 O
ATOM 20 N1 G B 39 -8.305 44.059 -9.966 1.00 56.56 N
ATOM 21 C2 G B 39 -7.418 43.198 -9.369 1.00 56.14 C
ATOM 22 N2 G B 39 -6.251 43.730 -8.979 1.00 56.86 N
ATOM 23 N3 G B 39 -7.654 41.911 -9.164 1.00 55.77 N
ATOM 24 C4 G B 39 -8.873 41.554 -9.618 1.00 53.01 C
ATOM 25 P G B 40 -7.435 36.791 -5.313 1.00 53.38 P
ATOM 26 OP1 G B 40 -5.967 36.624 -5.259 1.00 55.22 O
ATOM 27 OP2 G B 40 -8.314 35.698 -4.843 1.00 51.36 O
ATOM 28 O5' G B 40 -7.803 38.126 -4.512 1.00 51.17 O
TER
ATOM 2 P U A 90 -3.198 36.572 -11.562 1.00 51.54 P
ATOM 3 OP1 U A 90 -2.814 35.429 -12.426 1.00 48.66 O
ATOM 4 OP2 U A 90 -3.095 37.947 -12.101 1.00 48.41 O
ATOM 5 O5' U A 90 -4.676 36.295 -11.016 1.00 52.90 O
ATOM 6 C5' U A 90 -5.616 37.337 -10.828 1.00 48.90 C
ATOM 7 C4' U A 90 -6.744 37.171 -11.826 1.00 46.97 C
ATOM 8 O4' U A 90 -7.518 38.386 -11.780 1.00 52.96 O
ATOM 9 C3' U A 90 -6.237 37.001 -13.255 1.00 49.49 C
ATOM 10 O3' U A 90 -6.458 35.651 -13.811 1.00 51.39 O
ATOM 11 C2' U A 90 -6.747 38.215 -14.040 1.00 48.46 C
ATOM 12 O2' U A 90 -7.583 37.885 -15.125 1.00 51.31 O
ATOM 13 C1' U A 90 -7.505 39.061 -13.017 1.00 51.71 C
ATOM 14 N1 U A 90 -6.913 40.426 -12.856 1.00 53.85 N
ATOM 15 C2 U A 90 -7.695 41.538 -13.098 1.00 54.14 C
ATOM 16 O2 U A 90 -8.863 41.471 -13.422 1.00 53.95 O
ATOM 17 N3 U A 90 -7.065 42.748 -12.947 1.00 56.01 N
ATOM 18 C4 U A 90 -5.749 42.960 -12.586 1.00 55.68 C
ATOM 19 O4 U A 90 -5.325 44.106 -12.489 1.00 56.29 O
ATOM 20 C5 U A 90 -4.991 41.757 -12.353 1.00 55.22 C
ATOM 21 C6 U A 90 -5.587 40.562 -12.497 1.00 56.54 C
ATOM 22 P C A 91 -7.733 35.023 -14.561 1.00 48.20 P
ATOM 23 OP1 C A 91 -8.928 35.309 -13.735 1.00 52.04 O
ATOM 24 OP2 C A 91 -7.396 33.620 -14.882 1.00 47.02 O
ATOM 25 O5' C A 91 -7.836 35.790 -15.957 1.00 45.13 O
TER
ATOM 1 O3' A B 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 2 P G B 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 3 OP1 G B 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 4 OP2 G B 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 5 O5' G B 39 -11.810 37.529 -8.199 1.00 50.17 O
ATOM 6 C5' G B 39 -10.936 36.488 -8.619 1.00 49.32 C
ATOM 7 C4' G B 39 -9.495 36.947 -8.555 1.00 49.28 C
ATOM 8 O4' G B 39 -9.291 37.967 -9.569 1.00 50.11 O
ATOM 9 C3' G B 39 -9.104 37.550 -7.212 1.00 49.21 C
ATOM 10 O3' G B 39 -7.791 37.151 -6.836 1.00 51.85 O
ATOM 11 C2' G B 39 -9.204 39.041 -7.506 1.00 50.46 C
ATOM 12 O2' G B 39 -8.381 39.845 -6.687 1.00 52.08 O
ATOM 13 C1' G B 39 -8.772 39.126 -8.966 1.00 50.87 C
ATOM 14 N9 G B 39 -9.399 40.292 -9.560 1.00 51.97 N
ATOM 15 C8 G B 39 -10.649 40.375 -10.121 1.00 52.44 C
ATOM 16 N7 G B 39 -10.949 41.574 -10.540 1.00 52.41 N
ATOM 17 C5 G B 39 -9.829 42.331 -10.227 1.00 53.41 C
ATOM 18 C6 G B 39 -9.564 43.704 -10.437 1.00 56.23 C
ATOM 19 O6 G B 39 -10.288 44.561 -10.961 1.00 59.37 O
ATOM 20 N1 G B 39 -8.305 44.059 -9.966 1.00 56.56 N
ATOM 21 C2 G B 39 -7.418 43.198 -9.369 1.00 56.14 C
ATOM 22 N2 G B 39 -6.251 43.730 -8.979 1.00 56.86 N
ATOM 23 N3 G B 39 -7.654 41.911 -9.164 1.00 55.77 N
ATOM 24 C4 G B 39 -8.873 41.554 -9.618 1.00 53.01 C
ATOM 25 P G B 40 -7.435 36.791 -5.313 1.00 53.38 P
ATOM 26 OP1 G B 40 -5.967 36.624 -5.259 1.00 55.22 O
ATOM 27 OP2 G B 40 -8.314 35.698 -4.843 1.00 51.36 O
ATOM 28 O5' G B 40 -7.803 38.126 -4.512 1.00 51.17 O
TER
Atoms:
C4: (-5.749,42.960,-12.586)
N3: (-7.065,42.748,-12.947)
OP1: (-2.814,35.429,-12.426)
OP2: (-3.095,37.947,-12.101)
C2: (-7.695,41.538,-13.098)
C1': (-7.505,39.061,-13.017)
C3': (-6.237,37.001,-13.255)
O5': (-4.676,36.295,-11.016)
O4': (-7.518,38.386,-11.780)
C5': (-5.616,37.337,-10.828)
P: (-3.198,36.572,-11.562)
C4': (-6.744,37.171,-11.826)
C2': (-6.747,38.215,-14.040)
O2': (-7.583,37.885,-15.125)
N1: (-6.913,40.426,-12.856)
O4: (-5.325,44.106,-12.489)
O2: (-8.863,41.471,-13.422)
C6: (-5.587,40.562,-12.497)
C5: (-4.991,41.757,-12.353)
O3': (-6.458,35.651,-13.811)
N3: (-7.065,42.748,-12.947)
OP1: (-2.814,35.429,-12.426)
OP2: (-3.095,37.947,-12.101)
C2: (-7.695,41.538,-13.098)
C1': (-7.505,39.061,-13.017)
C3': (-6.237,37.001,-13.255)
O5': (-4.676,36.295,-11.016)
O4': (-7.518,38.386,-11.780)
C5': (-5.616,37.337,-10.828)
P: (-3.198,36.572,-11.562)
C4': (-6.744,37.171,-11.826)
C2': (-6.747,38.215,-14.040)
O2': (-7.583,37.885,-15.125)
N1: (-6.913,40.426,-12.856)
O4: (-5.325,44.106,-12.489)
O2: (-8.863,41.471,-13.422)
C6: (-5.587,40.562,-12.497)
C5: (-4.991,41.757,-12.353)
O3': (-6.458,35.651,-13.811)
OP1: (-13.808,36.080,-8.484)
OP2: (-14.040,38.623,-8.021)
C3': (-9.104,37.550,-7.212)
C1': (-8.772,39.126,-8.966)
C5': (-10.936,36.488,-8.619)
O6: (-10.288,44.561,-10.961)
O4': (-9.291,37.967,-9.569)
C8: (-10.649,40.375,-10.121)
C2: (-7.418,43.198,-9.369)
C6: (-9.564,43.704,-10.437)
C5: (-9.829,42.331,-10.227)
C4: (-8.873,41.554,-9.618)
P: (-13.340,37.479,-8.653)
C4': (-9.495,36.947,-8.555)
C2': (-9.204,39.041,-7.506)
O2': (-8.381,39.845,-6.687)
N1: (-8.305,44.059,-9.966)
N2: (-6.251,43.730,-8.979)
N3: (-7.654,41.911,-9.164)
N7: (-10.949,41.574,-10.540)
N9: (-9.399,40.292,-9.560)
O5': (-11.810,37.529,-8.199)
O3': (-7.791,37.151,-6.836)
OP2: (-14.040,38.623,-8.021)
C3': (-9.104,37.550,-7.212)
C1': (-8.772,39.126,-8.966)
C5': (-10.936,36.488,-8.619)
O6: (-10.288,44.561,-10.961)
O4': (-9.291,37.967,-9.569)
C8: (-10.649,40.375,-10.121)
C2: (-7.418,43.198,-9.369)
C6: (-9.564,43.704,-10.437)
C5: (-9.829,42.331,-10.227)
C4: (-8.873,41.554,-9.618)
P: (-13.340,37.479,-8.653)
C4': (-9.495,36.947,-8.555)
C2': (-9.204,39.041,-7.506)
O2': (-8.381,39.845,-6.687)
N1: (-8.305,44.059,-9.966)
N2: (-6.251,43.730,-8.979)
N3: (-7.654,41.911,-9.164)
N7: (-10.949,41.574,-10.540)
N9: (-9.399,40.292,-9.560)
O5': (-11.810,37.529,-8.199)
O3': (-7.791,37.151,-6.836)
Image (generated by PyMOL):