ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OL6:C5:C6

Extra

PDB:
ATOM 1 O3' G A 4 44.913 31.497 113.810 1.00 67.83 O
ATOM 2 P G A 5 43.397 31.250 114.292 1.00 82.76 P
ATOM 3 OP1 G A 5 43.461 30.643 115.647 1.00 79.64 O
ATOM 4 OP2 G A 5 42.709 30.510 113.203 1.00 76.34 O
ATOM 5 O5' G A 5 42.805 32.721 114.389 1.00 60.81 O
ATOM 6 C5' G A 5 43.405 33.693 115.227 1.00 60.55 C
ATOM 7 C4' G A 5 42.685 35.014 115.144 1.00 54.85 C
ATOM 8 O4' G A 5 42.800 35.558 113.802 1.00 62.41 O
ATOM 9 C3' G A 5 41.188 34.977 115.389 1.00 48.20 C
ATOM 10 O3' G A 5 40.868 34.907 116.766 1.00 47.71 O
ATOM 11 C2' G A 5 40.727 36.264 114.711 1.00 56.51 C
ATOM 12 O2' G A 5 41.035 37.392 115.511 1.00 48.30 O
ATOM 13 C1' G A 5 41.640 36.295 113.486 1.00 57.74 C
ATOM 14 N9 G A 5 41.000 35.689 112.302 1.00 64.34 N
ATOM 15 C8 G A 5 41.289 34.463 111.752 1.00 58.70 C
ATOM 16 N7 G A 5 40.555 34.199 110.705 1.00 57.89 N
ATOM 17 C5 G A 5 39.725 35.311 110.554 1.00 63.59 C
ATOM 18 C6 G A 5 38.711 35.602 109.588 1.00 65.67 C
ATOM 19 O6 G A 5 38.319 34.919 108.632 1.00 53.44 O
ATOM 20 N1 G A 5 38.122 36.839 109.804 1.00 54.08 N
ATOM 21 C2 G A 5 38.466 37.688 110.812 1.00 53.20 C
ATOM 22 N2 G A 5 37.786 38.829 110.844 1.00 52.51 N
ATOM 23 N3 G A 5 39.395 37.445 111.716 1.00 55.94 N
ATOM 24 C4 G A 5 39.990 36.244 111.531 1.00 58.88 C
ATOM 25 P A A 6 39.417 34.418 117.280 1.00 56.97 P
ATOM 26 OP1 A A 6 39.501 34.375 118.760 1.00 61.36 O
ATOM 27 OP2 A A 6 39.057 33.178 116.545 1.00 52.10 O
ATOM 28 O5' A A 6 38.448 35.587 116.831 1.00 50.45 O
TER

ATOM 1 O3' G B 5 40.868 34.907 116.766 1.00 47.71 O
ATOM 2 P A B 6 39.417 34.418 117.280 1.00 56.97 P
ATOM 3 OP1 A B 6 39.501 34.375 118.760 1.00 61.36 O
ATOM 4 OP2 A B 6 39.057 33.178 116.545 1.00 52.10 O
ATOM 5 O5' A B 6 38.448 35.587 116.831 1.00 50.45 O
ATOM 6 C5' A B 6 38.428 36.827 117.510 1.00 34.97 C
ATOM 7 C4' A B 6 37.303 37.683 117.012 1.00 33.14 C
ATOM 8 O4' A B 6 37.563 38.070 115.640 1.00 44.60 O
ATOM 9 C3' A B 6 35.954 37.002 116.946 1.00 45.61 C
ATOM 10 O3' A B 6 35.291 36.983 118.183 1.00 38.42 O
ATOM 11 C2' A B 6 35.232 37.804 115.883 1.00 61.00 C
ATOM 12 O2' A B 6 34.821 39.057 116.402 1.00 54.37 O
ATOM 13 C1' A B 6 36.365 38.047 114.899 1.00 46.24 C
ATOM 14 N9 A B 6 36.461 36.973 113.886 1.00 55.23 N
ATOM 15 C8 A B 6 37.280 35.874 113.897 1.00 42.93 C
ATOM 16 N7 A B 6 37.153 35.106 112.845 1.00 53.05 N
ATOM 17 C5 A B 6 36.187 35.748 112.079 1.00 55.88 C
ATOM 18 C6 A B 6 35.602 35.446 110.836 1.00 53.34 C
ATOM 19 N6 A B 6 35.900 34.373 110.109 1.00 44.39 N
ATOM 20 N1 A B 6 34.671 36.286 110.357 1.00 61.54 N
ATOM 21 C2 A B 6 34.352 37.363 111.083 1.00 61.65 C
ATOM 22 N3 A B 6 34.829 37.754 112.262 1.00 55.24 N
ATOM 23 C4 A B 6 35.753 36.893 112.710 1.00 51.87 C
ATOM 24 P C B 7 34.057 35.992 118.408 1.00 58.63 P
ATOM 25 OP1 C B 7 33.465 36.323 119.726 1.00 71.74 O
ATOM 26 OP2 C B 7 34.543 34.610 118.179 1.00 50.90 O
ATOM 27 O5' C B 7 33.064 36.415 117.239 1.00 63.32 O
TER

Atoms:
OP1: (43.461,30.643,115.647)
OP2: (42.709,30.510,113.203)
C3': (41.188,34.977,115.389)
C1': (41.640,36.295,113.486)
C5': (43.405,33.693,115.227)
O6: (38.319,34.919,108.632)
O4': (42.800,35.558,113.802)
C8: (41.289,34.463,111.752)
C2: (38.466,37.688,110.812)
C6: (38.711,35.602,109.588)
C5: (39.725,35.311,110.554)
C4: (39.990,36.244,111.531)
P: (43.397,31.250,114.292)
C4': (42.685,35.014,115.144)
C2': (40.727,36.264,114.711)
O2': (41.035,37.392,115.511)
N1: (38.122,36.839,109.804)
N2: (37.786,38.829,110.844)
N3: (39.395,37.445,111.716)
N7: (40.555,34.199,110.705)
N9: (41.000,35.689,112.302)
O5': (42.805,32.721,114.389)
O3': (40.868,34.907,116.766)
OP1: (39.501,34.375,118.760)
OP2: (39.057,33.178,116.545)
C3': (35.954,37.002,116.946)
C1': (36.365,38.047,114.899)
C5': (38.428,36.827,117.510)
O4': (37.563,38.070,115.640)
C8: (37.280,35.874,113.897)
O2': (34.821,39.057,116.402)
C6: (35.602,35.446,110.836)
C5: (36.187,35.748,112.079)
C4: (35.753,36.893,112.710)
P: (39.417,34.418,117.280)
C4': (37.303,37.683,117.012)
C2': (35.232,37.804,115.883)
C2: (34.352,37.363,111.083)
N1: (34.671,36.286,110.357)
N3: (34.829,37.754,112.262)
N6: (35.900,34.373,110.109)
N7: (37.153,35.106,112.845)
N9: (36.461,36.973,113.886)
O5': (38.448,35.587,116.831)
O3': (35.291,36.983,118.183)
Image (generated by PyMOL):
PyMOL image
show in jmol