Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X1:X2
Extra
PDB:
ATOM 1 P G A 1 -7.064 -45.807 -71.889 1.00207.79 P
ATOM 2 OP1 G A 1 -6.254 -46.612 -70.942 1.00195.69 O
ATOM 3 OP2 G A 1 -6.945 -46.081 -73.341 1.00172.94 O
ATOM 4 O5' G A 1 -8.593 -45.843 -71.458 1.00196.11 O
ATOM 5 C5' G A 1 -8.979 -45.582 -70.119 1.00201.52 C
ATOM 6 C4' G A 1 -10.477 -45.574 -69.973 1.00190.86 C
ATOM 7 O4' G A 1 -11.036 -44.461 -70.721 1.00181.83 O
ATOM 8 C3' G A 1 -11.205 -46.785 -70.534 1.00183.35 C
ATOM 9 O3' G A 1 -11.172 -47.910 -69.674 1.00189.89 O
ATOM 10 C2' G A 1 -12.600 -46.236 -70.778 1.00174.61 C
ATOM 11 O2' G A 1 -13.304 -46.095 -69.553 1.00177.95 O
ATOM 12 C1' G A 1 -12.266 -44.844 -71.301 1.00171.87 C
ATOM 13 N9 G A 1 -12.108 -44.844 -72.765 1.00144.09 N
ATOM 14 C8 G A 1 -10.942 -44.754 -73.486 1.00146.77 C
ATOM 15 N7 G A 1 -11.134 -44.793 -74.777 1.00142.60 N
ATOM 16 C5 G A 1 -12.511 -44.924 -74.915 1.00138.46 C
ATOM 17 C6 G A 1 -13.323 -45.020 -76.078 1.00136.70 C
ATOM 18 O6 G A 1 -12.976 -45.009 -77.267 1.00137.00 O
ATOM 19 N1 G A 1 -14.673 -45.139 -75.751 1.00137.14 N
ATOM 20 C2 G A 1 -15.183 -45.164 -74.473 1.00137.67 C
ATOM 21 N2 G A 1 -16.516 -45.286 -74.360 1.00144.62 N
ATOM 22 N3 G A 1 -14.436 -45.077 -73.384 1.00137.98 N
ATOM 23 C4 G A 1 -13.124 -44.959 -73.679 1.00139.14 C
ATOM 24 P A A 2 -10.940 -49.381 -70.283 1.00174.25 P
ATOM 25 OP1 A A 2 -9.858 -49.270 -71.292 1.00157.40 O
ATOM 26 OP2 A A 2 -10.753 -50.303 -69.136 1.00169.46 O
ATOM 27 O5' A A 2 -12.326 -49.689 -71.007 1.00163.05 O
TER
ATOM 1 O3' G B 1 -11.172 -47.910 -69.674 1.00189.89 O
ATOM 2 P A B 2 -10.940 -49.381 -70.283 1.00174.25 P
ATOM 3 OP1 A B 2 -9.858 -49.270 -71.292 1.00157.40 O
ATOM 4 OP2 A B 2 -10.753 -50.303 -69.136 1.00169.46 O
ATOM 5 O5' A B 2 -12.326 -49.689 -71.007 1.00163.05 O
ATOM 6 C5' A B 2 -13.535 -49.779 -70.267 1.00161.70 C
ATOM 7 C4' A B 2 -14.734 -49.886 -71.177 1.00154.49 C
ATOM 8 O4' A B 2 -14.833 -48.693 -72.000 1.00150.08 O
ATOM 9 C3' A B 2 -14.707 -51.029 -72.180 1.00152.33 C
ATOM 10 O3' A B 2 -15.113 -52.267 -71.619 1.00156.70 O
ATOM 11 C2' A B 2 -15.624 -50.524 -73.286 1.00148.76 C
ATOM 12 O2' A B 2 -16.988 -50.669 -72.916 1.00151.48 O
ATOM 13 C1' A B 2 -15.285 -49.034 -73.294 1.00146.94 C
ATOM 14 N9 A B 2 -14.216 -48.715 -74.262 1.00132.34 N
ATOM 15 C8 A B 2 -12.903 -48.410 -73.988 1.00132.35 C
ATOM 16 N7 A B 2 -12.176 -48.167 -75.052 1.00131.02 N
ATOM 17 C5 A B 2 -13.072 -48.319 -76.099 1.00129.43 C
ATOM 18 C6 A B 2 -12.920 -48.195 -77.491 1.00128.49 C
ATOM 19 N6 A B 2 -11.765 -47.879 -78.086 1.00127.25 N
ATOM 20 N1 A B 2 -14.014 -48.412 -78.258 1.00130.06 N
ATOM 21 C2 A B 2 -15.171 -48.729 -77.660 1.00134.53 C
ATOM 22 N3 A B 2 -15.436 -48.876 -76.364 1.00135.22 N
ATOM 23 C4 A B 2 -14.332 -48.652 -75.629 1.00131.48 C
ATOM 24 P U B 3 -14.331 -53.623 -71.993 1.00162.39 P
ATOM 25 OP1 U B 3 -14.520 -54.564 -70.862 1.00139.21 O
ATOM 26 OP2 U B 3 -12.949 -53.243 -72.377 1.00134.68 O
ATOM 27 O5' U B 3 -15.124 -54.143 -73.271 1.00158.22 O
TER
ATOM 2 OP1 G A 1 -6.254 -46.612 -70.942 1.00195.69 O
ATOM 3 OP2 G A 1 -6.945 -46.081 -73.341 1.00172.94 O
ATOM 4 O5' G A 1 -8.593 -45.843 -71.458 1.00196.11 O
ATOM 5 C5' G A 1 -8.979 -45.582 -70.119 1.00201.52 C
ATOM 6 C4' G A 1 -10.477 -45.574 -69.973 1.00190.86 C
ATOM 7 O4' G A 1 -11.036 -44.461 -70.721 1.00181.83 O
ATOM 8 C3' G A 1 -11.205 -46.785 -70.534 1.00183.35 C
ATOM 9 O3' G A 1 -11.172 -47.910 -69.674 1.00189.89 O
ATOM 10 C2' G A 1 -12.600 -46.236 -70.778 1.00174.61 C
ATOM 11 O2' G A 1 -13.304 -46.095 -69.553 1.00177.95 O
ATOM 12 C1' G A 1 -12.266 -44.844 -71.301 1.00171.87 C
ATOM 13 N9 G A 1 -12.108 -44.844 -72.765 1.00144.09 N
ATOM 14 C8 G A 1 -10.942 -44.754 -73.486 1.00146.77 C
ATOM 15 N7 G A 1 -11.134 -44.793 -74.777 1.00142.60 N
ATOM 16 C5 G A 1 -12.511 -44.924 -74.915 1.00138.46 C
ATOM 17 C6 G A 1 -13.323 -45.020 -76.078 1.00136.70 C
ATOM 18 O6 G A 1 -12.976 -45.009 -77.267 1.00137.00 O
ATOM 19 N1 G A 1 -14.673 -45.139 -75.751 1.00137.14 N
ATOM 20 C2 G A 1 -15.183 -45.164 -74.473 1.00137.67 C
ATOM 21 N2 G A 1 -16.516 -45.286 -74.360 1.00144.62 N
ATOM 22 N3 G A 1 -14.436 -45.077 -73.384 1.00137.98 N
ATOM 23 C4 G A 1 -13.124 -44.959 -73.679 1.00139.14 C
ATOM 24 P A A 2 -10.940 -49.381 -70.283 1.00174.25 P
ATOM 25 OP1 A A 2 -9.858 -49.270 -71.292 1.00157.40 O
ATOM 26 OP2 A A 2 -10.753 -50.303 -69.136 1.00169.46 O
ATOM 27 O5' A A 2 -12.326 -49.689 -71.007 1.00163.05 O
TER
ATOM 1 O3' G B 1 -11.172 -47.910 -69.674 1.00189.89 O
ATOM 2 P A B 2 -10.940 -49.381 -70.283 1.00174.25 P
ATOM 3 OP1 A B 2 -9.858 -49.270 -71.292 1.00157.40 O
ATOM 4 OP2 A B 2 -10.753 -50.303 -69.136 1.00169.46 O
ATOM 5 O5' A B 2 -12.326 -49.689 -71.007 1.00163.05 O
ATOM 6 C5' A B 2 -13.535 -49.779 -70.267 1.00161.70 C
ATOM 7 C4' A B 2 -14.734 -49.886 -71.177 1.00154.49 C
ATOM 8 O4' A B 2 -14.833 -48.693 -72.000 1.00150.08 O
ATOM 9 C3' A B 2 -14.707 -51.029 -72.180 1.00152.33 C
ATOM 10 O3' A B 2 -15.113 -52.267 -71.619 1.00156.70 O
ATOM 11 C2' A B 2 -15.624 -50.524 -73.286 1.00148.76 C
ATOM 12 O2' A B 2 -16.988 -50.669 -72.916 1.00151.48 O
ATOM 13 C1' A B 2 -15.285 -49.034 -73.294 1.00146.94 C
ATOM 14 N9 A B 2 -14.216 -48.715 -74.262 1.00132.34 N
ATOM 15 C8 A B 2 -12.903 -48.410 -73.988 1.00132.35 C
ATOM 16 N7 A B 2 -12.176 -48.167 -75.052 1.00131.02 N
ATOM 17 C5 A B 2 -13.072 -48.319 -76.099 1.00129.43 C
ATOM 18 C6 A B 2 -12.920 -48.195 -77.491 1.00128.49 C
ATOM 19 N6 A B 2 -11.765 -47.879 -78.086 1.00127.25 N
ATOM 20 N1 A B 2 -14.014 -48.412 -78.258 1.00130.06 N
ATOM 21 C2 A B 2 -15.171 -48.729 -77.660 1.00134.53 C
ATOM 22 N3 A B 2 -15.436 -48.876 -76.364 1.00135.22 N
ATOM 23 C4 A B 2 -14.332 -48.652 -75.629 1.00131.48 C
ATOM 24 P U B 3 -14.331 -53.623 -71.993 1.00162.39 P
ATOM 25 OP1 U B 3 -14.520 -54.564 -70.862 1.00139.21 O
ATOM 26 OP2 U B 3 -12.949 -53.243 -72.377 1.00134.68 O
ATOM 27 O5' U B 3 -15.124 -54.143 -73.271 1.00158.22 O
TER
Atoms:
OP1: (-6.254,-46.612,-70.942)
OP2: (-6.945,-46.081,-73.341)
C3': (-11.205,-46.785,-70.534)
C1': (-12.266,-44.844,-71.301)
C5': (-8.979,-45.582,-70.119)
O6: (-12.976,-45.009,-77.267)
O4': (-11.036,-44.461,-70.721)
C8: (-10.942,-44.754,-73.486)
C2: (-15.183,-45.164,-74.473)
C6: (-13.323,-45.020,-76.078)
C5: (-12.511,-44.924,-74.915)
C4: (-13.124,-44.959,-73.679)
P: (-7.064,-45.807,-71.889)
C4': (-10.477,-45.574,-69.973)
C2': (-12.600,-46.236,-70.778)
O2': (-13.304,-46.095,-69.553)
N1: (-14.673,-45.139,-75.751)
N2: (-16.516,-45.286,-74.360)
N3: (-14.436,-45.077,-73.384)
N7: (-11.134,-44.793,-74.777)
N9: (-12.108,-44.844,-72.765)
O5': (-8.593,-45.843,-71.458)
O3': (-11.172,-47.910,-69.674)
OP2: (-6.945,-46.081,-73.341)
C3': (-11.205,-46.785,-70.534)
C1': (-12.266,-44.844,-71.301)
C5': (-8.979,-45.582,-70.119)
O6: (-12.976,-45.009,-77.267)
O4': (-11.036,-44.461,-70.721)
C8: (-10.942,-44.754,-73.486)
C2: (-15.183,-45.164,-74.473)
C6: (-13.323,-45.020,-76.078)
C5: (-12.511,-44.924,-74.915)
C4: (-13.124,-44.959,-73.679)
P: (-7.064,-45.807,-71.889)
C4': (-10.477,-45.574,-69.973)
C2': (-12.600,-46.236,-70.778)
O2': (-13.304,-46.095,-69.553)
N1: (-14.673,-45.139,-75.751)
N2: (-16.516,-45.286,-74.360)
N3: (-14.436,-45.077,-73.384)
N7: (-11.134,-44.793,-74.777)
N9: (-12.108,-44.844,-72.765)
O5': (-8.593,-45.843,-71.458)
O3': (-11.172,-47.910,-69.674)
OP1: (-9.858,-49.270,-71.292)
OP2: (-10.753,-50.303,-69.136)
C3': (-14.707,-51.029,-72.180)
C1': (-15.285,-49.034,-73.294)
C5': (-13.535,-49.779,-70.267)
O4': (-14.833,-48.693,-72.000)
C8: (-12.903,-48.410,-73.988)
O2': (-16.988,-50.669,-72.916)
C6: (-12.920,-48.195,-77.491)
C5: (-13.072,-48.319,-76.099)
C4: (-14.332,-48.652,-75.629)
P: (-10.940,-49.381,-70.283)
C4': (-14.734,-49.886,-71.177)
C2': (-15.624,-50.524,-73.286)
C2: (-15.171,-48.729,-77.660)
N1: (-14.014,-48.412,-78.258)
N3: (-15.436,-48.876,-76.364)
N6: (-11.765,-47.879,-78.086)
N7: (-12.176,-48.167,-75.052)
N9: (-14.216,-48.715,-74.262)
O5': (-12.326,-49.689,-71.007)
O3': (-15.113,-52.267,-71.619)
OP2: (-10.753,-50.303,-69.136)
C3': (-14.707,-51.029,-72.180)
C1': (-15.285,-49.034,-73.294)
C5': (-13.535,-49.779,-70.267)
O4': (-14.833,-48.693,-72.000)
C8: (-12.903,-48.410,-73.988)
O2': (-16.988,-50.669,-72.916)
C6: (-12.920,-48.195,-77.491)
C5: (-13.072,-48.319,-76.099)
C4: (-14.332,-48.652,-75.629)
P: (-10.940,-49.381,-70.283)
C4': (-14.734,-49.886,-71.177)
C2': (-15.624,-50.524,-73.286)
C2: (-15.171,-48.729,-77.660)
N1: (-14.014,-48.412,-78.258)
N3: (-15.436,-48.876,-76.364)
N6: (-11.765,-47.879,-78.086)
N7: (-12.176,-48.167,-75.052)
N9: (-14.216,-48.715,-74.262)
O5': (-12.326,-49.689,-71.007)
O3': (-15.113,-52.267,-71.619)
Image (generated by PyMOL):