ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1502:A1503

Extra

PDB:
ATOM 1 O3' G A1501 -17.648 -12.179 16.604 1.00 17.62 O
ATOM 2 P G A1502 -19.069 -11.447 16.798 1.00 55.02 P
ATOM 3 OP1 G A1502 -18.813 -10.261 17.645 1.00 32.59 O
ATOM 4 OP2 G A1502 -20.109 -12.443 17.219 1.00 32.59 O
ATOM 5 O5' G A1502 -19.413 -10.929 15.334 1.00 32.65 O
ATOM 6 C5' G A1502 -18.428 -10.216 14.562 1.00 32.65 C
ATOM 7 C4' G A1502 -18.897 -10.039 13.135 1.00 32.65 C
ATOM 8 O4' G A1502 -18.957 -11.322 12.463 1.00 32.65 O
ATOM 9 C3' G A1502 -20.284 -9.446 12.963 1.00 32.65 C
ATOM 10 O3' G A1502 -20.241 -8.031 13.034 1.00 32.65 O
ATOM 11 C2' G A1502 -20.705 -9.956 11.589 1.00 32.65 C
ATOM 12 O2' G A1502 -20.195 -9.177 10.526 1.00 32.65 O
ATOM 13 C1' G A1502 -20.046 -11.338 11.553 1.00 32.65 C
ATOM 14 N9 G A1502 -20.945 -12.436 11.918 1.00 23.89 N
ATOM 15 C8 G A1502 -20.845 -13.268 13.009 1.00 23.89 C
ATOM 16 N7 G A1502 -21.803 -14.150 13.069 1.00 23.89 N
ATOM 17 C5 G A1502 -22.581 -13.890 11.950 1.00 23.89 C
ATOM 18 C6 G A1502 -23.758 -14.527 11.484 1.00 23.89 C
ATOM 19 O6 G A1502 -24.363 -15.486 11.979 1.00 23.89 O
ATOM 20 N1 G A1502 -24.227 -13.943 10.313 1.00 23.89 N
ATOM 21 C2 G A1502 -23.636 -12.889 9.666 1.00 23.89 C
ATOM 22 N2 G A1502 -24.242 -12.467 8.552 1.00 23.89 N
ATOM 23 N3 G A1502 -22.533 -12.292 10.083 1.00 23.89 N
ATOM 24 C4 G A1502 -22.065 -12.839 11.226 1.00 23.89 C
ATOM 25 P A A1503 -21.473 -7.237 13.678 1.00 60.46 P
ATOM 26 OP1 A A1503 -21.097 -5.806 13.736 1.00 32.44 O
ATOM 27 OP2 A A1503 -21.877 -7.942 14.921 1.00 32.44 O
ATOM 28 O5' A A1503 -22.622 -7.394 12.587 1.00 31.70 O
TER

ATOM 1 O3' G B1502 -20.241 -8.031 13.034 1.00 32.65 O
ATOM 2 P A B1503 -21.473 -7.237 13.678 1.00 60.46 P
ATOM 3 OP1 A B1503 -21.097 -5.806 13.736 1.00 32.44 O
ATOM 4 OP2 A B1503 -21.877 -7.942 14.921 1.00 32.44 O
ATOM 5 O5' A B1503 -22.622 -7.394 12.587 1.00 31.70 O
ATOM 6 C5' A B1503 -22.467 -6.817 11.274 1.00 31.70 C
ATOM 7 C4' A B1503 -23.638 -7.179 10.386 1.00 31.70 C
ATOM 8 O4' A B1503 -23.622 -8.600 10.085 1.00 31.70 O
ATOM 9 C3' A B1503 -25.028 -6.922 10.943 1.00 31.70 C
ATOM 10 O3' A B1503 -25.447 -5.593 10.740 1.00 31.70 O
ATOM 11 C2' A B1503 -25.892 -7.882 10.138 1.00 31.70 C
ATOM 12 O2' A B1503 -26.219 -7.350 8.864 1.00 31.70 O
ATOM 13 C1' A B1503 -24.954 -9.078 9.971 1.00 31.70 C
ATOM 14 N9 A B1503 -25.159 -10.108 10.991 1.00 13.82 N
ATOM 15 C8 A B1503 -24.360 -10.385 12.078 1.00 13.82 C
ATOM 16 N7 A B1503 -24.769 -11.407 12.790 1.00 13.82 N
ATOM 17 C5 A B1503 -25.918 -11.823 12.139 1.00 13.82 C
ATOM 18 C6 A B1503 -26.794 -12.869 12.386 1.00 13.82 C
ATOM 19 N6 A B1503 -26.624 -13.737 13.366 1.00 13.82 N
ATOM 20 N1 A B1503 -27.855 -13.009 11.573 1.00 13.82 N
ATOM 21 C2 A B1503 -27.992 -12.154 10.552 1.00 13.82 C
ATOM 22 N3 A B1503 -27.215 -11.137 10.194 1.00 13.82 N
ATOM 23 C4 A B1503 -26.183 -11.021 11.041 1.00 13.82 C
ATOM 24 P G B1504 -26.686 -5.031 11.580 1.00 56.22 P
ATOM 25 OP1 G B1504 -26.930 -3.663 11.065 1.00 26.69 O
ATOM 26 OP2 G B1504 -26.441 -5.247 13.023 1.00 26.69 O
ATOM 27 O5' G B1504 -27.908 -5.953 11.141 1.00 27.40 O
TER

Atoms:
OP1: (-18.813,-10.261,17.645)
OP2: (-20.109,-12.443,17.219)
C3': (-20.284,-9.446,12.963)
C1': (-20.046,-11.338,11.553)
C5': (-18.428,-10.216,14.562)
O6: (-24.363,-15.486,11.979)
O4': (-18.957,-11.322,12.463)
C8: (-20.845,-13.268,13.009)
C2: (-23.636,-12.889,9.666)
C6: (-23.758,-14.527,11.484)
C5: (-22.581,-13.890,11.950)
C4: (-22.065,-12.839,11.226)
P: (-19.069,-11.447,16.798)
C4': (-18.897,-10.039,13.135)
C2': (-20.705,-9.956,11.589)
O2': (-20.195,-9.177,10.526)
N1: (-24.227,-13.943,10.313)
N2: (-24.242,-12.467,8.552)
N3: (-22.533,-12.292,10.083)
N7: (-21.803,-14.150,13.069)
N9: (-20.945,-12.436,11.918)
O5': (-19.413,-10.929,15.334)
O3': (-20.241,-8.031,13.034)
OP1: (-21.097,-5.806,13.736)
OP2: (-21.877,-7.942,14.921)
C3': (-25.028,-6.922,10.943)
C1': (-24.954,-9.078,9.971)
C5': (-22.467,-6.817,11.274)
O4': (-23.622,-8.600,10.085)
C8: (-24.360,-10.385,12.078)
O2': (-26.219,-7.350,8.864)
C6: (-26.794,-12.869,12.386)
C5: (-25.918,-11.823,12.139)
C4: (-26.183,-11.021,11.041)
P: (-21.473,-7.237,13.678)
C4': (-23.638,-7.179,10.386)
C2': (-25.892,-7.882,10.138)
C2: (-27.992,-12.154,10.552)
N1: (-27.855,-13.009,11.573)
N3: (-27.215,-11.137,10.194)
N6: (-26.624,-13.737,13.366)
N7: (-24.769,-11.407,12.790)
N9: (-25.159,-10.108,10.991)
O5': (-22.622,-7.394,12.587)
O3': (-25.447,-5.593,10.740)
Image (generated by PyMOL):
PyMOL image
show in jmol