ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:Y19:Y7

Extra

PDB:
ATOM 1 O3' U A 18 124.045 17.700 -58.814 1.00191.11 O
ATOM 2 P A A 19 124.882 16.638 -57.944 1.00190.60 P
ATOM 3 OP1 A A 19 126.195 17.256 -57.630 1.00190.71 O
ATOM 4 OP2 A A 19 124.838 15.319 -58.632 1.00190.30 O
ATOM 5 O5' A A 19 124.060 16.534 -56.585 1.00190.68 O
ATOM 6 C5' A A 19 123.747 15.271 -56.022 1.00190.86 C
ATOM 7 C4' A A 19 122.262 15.164 -55.787 1.00190.93 C
ATOM 8 O4' A A 19 121.939 13.782 -55.497 1.00191.60 O
ATOM 9 C3' A A 19 121.709 16.001 -54.636 1.00190.48 C
ATOM 10 O3' A A 19 120.416 16.494 -54.986 1.00188.66 O
ATOM 11 C2' A A 19 121.598 14.991 -53.495 1.00191.17 C
ATOM 12 O2' A A 19 120.562 15.308 -52.583 1.00191.30 O
ATOM 13 C1' A A 19 121.288 13.696 -54.247 1.00191.91 C
ATOM 14 N9 A A 19 121.761 12.481 -53.582 1.00192.74 N
ATOM 15 C8 A A 19 123.037 11.971 -53.566 1.00192.73 C
ATOM 16 N7 A A 19 123.147 10.844 -52.908 1.00193.24 N
ATOM 17 C5 A A 19 121.859 10.597 -52.452 1.00193.73 C
ATOM 18 C6 A A 19 121.313 9.553 -51.690 1.00194.03 C
ATOM 19 N6 A A 19 122.028 8.523 -51.239 1.00194.05 N
ATOM 20 N1 A A 19 119.993 9.603 -51.405 1.00194.03 N
ATOM 21 C2 A A 19 119.280 10.639 -51.861 1.00193.91 C
ATOM 22 N3 A A 19 119.679 11.681 -52.587 1.00193.76 N
ATOM 23 C4 A A 19 120.996 11.599 -52.853 1.00193.49 C
ATOM 24 P A A 20 119.889 17.880 -54.362 1.00187.69 P
ATOM 25 OP1 A A 20 119.486 18.754 -55.492 1.00187.94 O
ATOM 26 OP2 A A 20 120.890 18.373 -53.376 1.00187.81 O
ATOM 27 O5' A A 20 118.567 17.467 -53.576 1.00185.73 O
TER

ATOM 1 O3' A B 6 117.691 0.450 -47.817 1.00155.82 O
ATOM 2 P U B 7 119.158 1.111 -47.772 1.00156.23 P
ATOM 3 OP1 U B 7 120.161 0.015 -47.676 1.00156.32 O
ATOM 4 OP2 U B 7 119.112 2.160 -46.720 1.00155.89 O
ATOM 5 O5' U B 7 119.321 1.827 -49.188 1.00156.22 O
ATOM 6 C5' U B 7 120.595 1.898 -49.831 1.00156.49 C
ATOM 7 C4' U B 7 120.942 3.334 -50.175 1.00156.49 C
ATOM 8 O4' U B 7 119.966 3.855 -51.116 1.00156.53 O
ATOM 9 C3' U B 7 120.938 4.329 -49.019 1.00156.20 C
ATOM 10 O3' U B 7 122.179 4.350 -48.313 1.00155.49 O
ATOM 11 C2' U B 7 120.670 5.654 -49.722 1.00156.26 C
ATOM 12 O2' U B 7 121.854 6.194 -50.275 1.00156.34 O
ATOM 13 C1' U B 7 119.720 5.226 -50.845 1.00156.34 C
ATOM 14 N1 U B 7 118.300 5.372 -50.476 1.00156.23 N
ATOM 15 C2 U B 7 117.633 6.523 -50.864 1.00156.08 C
ATOM 16 O2 U B 7 118.160 7.420 -51.508 1.00155.72 O
ATOM 17 N3 U B 7 116.317 6.584 -50.470 1.00156.20 N
ATOM 18 C4 U B 7 115.615 5.634 -49.749 1.00155.98 C
ATOM 19 O4 U B 7 114.431 5.831 -49.470 1.00156.00 O
ATOM 20 C5 U B 7 116.371 4.480 -49.394 1.00155.97 C
ATOM 21 C6 U B 7 117.651 4.389 -49.757 1.00156.24 C
ATOM 22 P C B 8 122.196 4.674 -46.734 1.00155.10 P
ATOM 23 OP1 C B 8 123.241 3.824 -46.105 1.00154.91 O
ATOM 24 OP2 C B 8 120.796 4.600 -46.236 1.00154.71 O
ATOM 25 O5' C B 8 122.661 6.198 -46.645 1.00154.99 O
TER

Atoms:
OP1: (126.195,17.256,-57.630)
OP2: (124.838,15.319,-58.632)
C3': (121.709,16.001,-54.636)
C1': (121.288,13.696,-54.247)
C5': (123.747,15.271,-56.022)
O4': (121.939,13.782,-55.497)
C8: (123.037,11.971,-53.566)
O2': (120.562,15.308,-52.583)
C6: (121.313,9.553,-51.690)
C5: (121.859,10.597,-52.452)
C4: (120.996,11.599,-52.853)
P: (124.882,16.638,-57.944)
C4': (122.262,15.164,-55.787)
C2': (121.598,14.991,-53.495)
C2: (119.280,10.639,-51.861)
N1: (119.993,9.603,-51.405)
N3: (119.679,11.681,-52.587)
N6: (122.028,8.523,-51.239)
N7: (123.147,10.844,-52.908)
N9: (121.761,12.481,-53.582)
O5': (124.060,16.534,-56.585)
O3': (120.416,16.494,-54.986)
C4: (115.615,5.634,-49.749)
N3: (116.317,6.584,-50.470)
OP1: (120.161,0.015,-47.676)
OP2: (119.112,2.160,-46.720)
C2: (117.633,6.523,-50.864)
C1': (119.720,5.226,-50.845)
C3': (120.938,4.329,-49.019)
O5': (119.321,1.827,-49.188)
O4': (119.966,3.855,-51.116)
C5': (120.595,1.898,-49.831)
P: (119.158,1.111,-47.772)
C4': (120.942,3.334,-50.175)
C2': (120.670,5.654,-49.722)
O2': (121.854,6.194,-50.275)
N1: (118.300,5.372,-50.476)
O4: (114.431,5.831,-49.470)
O2: (118.160,7.420,-51.508)
C6: (117.651,4.389,-49.757)
C5: (116.371,4.480,-49.394)
O3': (122.179,4.350,-48.313)
Image (generated by PyMOL):
PyMOL image
show in jmol