ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A402:A403

Extra

PDB:
ATOM 1 O3' G A 401 90.226 -38.858 -60.473 1.00 27.50 O
ATOM 2 P U A 402 90.091 -37.267 -60.538 1.00 37.79 P
ATOM 3 OP1 U A 402 90.888 -36.712 -59.423 1.00 62.50 O
ATOM 4 OP2 U A 402 88.643 -36.950 -60.605 1.00 64.12 O
ATOM 5 O5' U A 402 90.791 -36.924 -61.928 1.00 41.94 O
ATOM 6 C5' U A 402 92.197 -37.044 -62.090 1.00 38.29 C
ATOM 7 C4' U A 402 92.769 -35.892 -62.875 1.00 37.69 C
ATOM 8 O4' U A 402 92.037 -35.778 -64.124 1.00 37.82 O
ATOM 9 C3' U A 402 92.657 -34.523 -62.195 1.00 37.02 C
ATOM 10 O3' U A 402 93.725 -33.654 -62.628 1.00 45.04 O
ATOM 11 C2' U A 402 91.345 -34.012 -62.769 1.00 36.72 C
ATOM 12 O2' U A 402 91.183 -32.619 -62.713 1.00 40.36 O
ATOM 13 C1' U A 402 91.454 -34.492 -64.202 1.00 42.97 C
ATOM 14 N1 U A 402 90.174 -34.601 -64.893 1.00 42.21 N
ATOM 15 C2 U A 402 90.024 -33.915 -66.061 1.00 54.54 C
ATOM 16 O2 U A 402 90.911 -33.229 -66.525 1.00 58.53 O
ATOM 17 N3 U A 402 88.806 -34.067 -66.675 1.00 61.60 N
ATOM 18 C4 U A 402 87.751 -34.834 -66.224 1.00 56.22 C
ATOM 19 O4 U A 402 86.697 -34.903 -66.855 1.00 61.90 O
ATOM 20 C5 U A 402 88.010 -35.513 -65.004 1.00 57.13 C
ATOM 21 C6 U A 402 89.183 -35.378 -64.396 1.00 52.79 C
ATOM 22 P G A 403 95.283 -34.013 -62.369 1.00 37.75 P
ATOM 23 OP1 G A 403 95.388 -34.609 -61.027 1.00 37.01 O
ATOM 24 OP2 G A 403 96.057 -32.793 -62.672 1.00 42.75 O
ATOM 25 O5' G A 403 95.585 -35.125 -63.462 1.00 36.54 O
TER

ATOM 1 O3' U B 402 93.725 -33.654 -62.628 1.00 45.04 O
ATOM 2 P G B 403 95.283 -34.013 -62.369 1.00 37.75 P
ATOM 3 OP1 G B 403 95.388 -34.609 -61.027 1.00 37.01 O
ATOM 4 OP2 G B 403 96.057 -32.793 -62.672 1.00 42.75 O
ATOM 5 O5' G B 403 95.585 -35.125 -63.462 1.00 36.54 O
ATOM 6 C5' G B 403 95.897 -34.789 -64.797 1.00 35.62 C
ATOM 7 C4' G B 403 96.009 -36.029 -65.620 1.00 38.33 C
ATOM 8 O4' G B 403 94.808 -36.798 -65.461 1.00 47.23 O
ATOM 9 C3' G B 403 96.126 -35.844 -67.115 1.00 43.40 C
ATOM 10 O3' G B 403 97.450 -35.529 -67.522 1.00 42.12 O
ATOM 11 C2' G B 403 95.617 -37.181 -67.656 1.00 41.52 C
ATOM 12 O2' G B 403 96.637 -38.157 -67.594 1.00 57.10 O
ATOM 13 C1' G B 403 94.562 -37.558 -66.622 1.00 47.15 C
ATOM 14 N9 G B 403 93.186 -37.290 -67.072 1.00 44.36 N
ATOM 15 C8 G B 403 92.768 -36.367 -67.977 1.00 46.32 C
ATOM 16 N7 G B 403 91.477 -36.361 -68.132 1.00 42.77 N
ATOM 17 C5 G B 403 91.013 -37.335 -67.276 1.00 38.19 C
ATOM 18 C6 G B 403 89.701 -37.764 -67.013 1.00 41.15 C
ATOM 19 O6 G B 403 88.642 -37.375 -67.502 1.00 54.62 O
ATOM 20 N1 G B 403 89.646 -38.766 -66.081 1.00 37.57 N
ATOM 21 C2 G B 403 90.729 -39.304 -65.460 1.00 44.52 C
ATOM 22 N2 G B 403 90.456 -40.281 -64.572 1.00 39.11 N
ATOM 23 N3 G B 403 91.974 -38.905 -65.691 1.00 49.49 N
ATOM 24 C4 G B 403 92.045 -37.921 -66.613 1.00 43.57 C
ATOM 25 P G B 404 97.852 -34.007 -67.902 1.00 46.85 P
ATOM 26 OP1 G B 404 99.338 -33.952 -67.970 1.00 49.01 O
ATOM 27 OP2 G B 404 97.150 -33.106 -66.955 1.00 33.14 O
ATOM 28 O5' G B 404 97.237 -33.840 -69.359 1.00 50.43 O
TER

Atoms:
C4: (87.751,-34.834,-66.224)
N3: (88.806,-34.067,-66.675)
OP1: (90.888,-36.712,-59.423)
OP2: (88.643,-36.950,-60.605)
C2: (90.024,-33.915,-66.061)
C1': (91.454,-34.492,-64.202)
C3': (92.657,-34.523,-62.195)
O5': (90.791,-36.924,-61.928)
O4': (92.037,-35.778,-64.124)
C5': (92.197,-37.044,-62.090)
P: (90.091,-37.267,-60.538)
C4': (92.769,-35.892,-62.875)
C2': (91.345,-34.012,-62.769)
O2': (91.183,-32.619,-62.713)
N1: (90.174,-34.601,-64.893)
O4: (86.697,-34.903,-66.855)
O2: (90.911,-33.229,-66.525)
C6: (89.183,-35.378,-64.396)
C5: (88.010,-35.513,-65.004)
O3': (93.725,-33.654,-62.628)
OP1: (95.388,-34.609,-61.027)
OP2: (96.057,-32.793,-62.672)
C3': (96.126,-35.844,-67.115)
C1': (94.562,-37.558,-66.622)
C5': (95.897,-34.789,-64.797)
O6: (88.642,-37.375,-67.502)
O4': (94.808,-36.798,-65.461)
C8: (92.768,-36.367,-67.977)
C2: (90.729,-39.304,-65.460)
C6: (89.701,-37.764,-67.013)
C5: (91.013,-37.335,-67.276)
C4: (92.045,-37.921,-66.613)
P: (95.283,-34.013,-62.369)
C4': (96.009,-36.029,-65.620)
C2': (95.617,-37.181,-67.656)
O2': (96.637,-38.157,-67.594)
N1: (89.646,-38.766,-66.081)
N2: (90.456,-40.281,-64.572)
N3: (91.974,-38.905,-65.691)
N7: (91.477,-36.361,-68.132)
N9: (93.186,-37.290,-67.072)
O5': (95.585,-35.125,-63.462)
O3': (97.450,-35.529,-67.522)
Image (generated by PyMOL):
PyMOL image
show in jmol